RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 LINC01620Q4KN68 170 aa13.67□□□□□ -0.22
SNX11-207ENST00000580875 SCXQ7RTU7 201 aa13.67□□□□□ -0.22
SNX11-207ENST00000580875 IGKV2D-24A0A075B6R9 120 aa13.66□□□□□ -0.22
SNX11-207ENST00000580875 M0QY20 66 aa13.66□□□□□ -0.22
SNX11-207ENST00000580875 RPL39LQ96EH5 51 aaKnown RBP13.66□□□□□ -0.22
SNX11-207ENST00000580875 KLK12Q9UKR0 248 aa13.66□□□□□ -0.22
SNX11-207ENST00000580875 LOC389332A0A1B0GUA5 103 aa13.65□□□□□ -0.22
SNX11-207ENST00000580875 DNAJC30Q96LL9 226 aa13.65□□□□□ -0.22
SNX11-207ENST00000580875 C20orf78Q9BR46 151 aa13.65□□□□□ -0.22
SNX11-207ENST00000580875 A0A087WX48 190 aa13.64□□□□□ -0.23
SNX11-207ENST00000580875 SERF1AO75920 110 aa13.64□□□□□ -0.23
SNX11-207ENST00000580875 SUMO2P61956 95 aaKnown RBP13.64□□□□□ -0.23
SNX11-207ENST00000580875 SNRPEP62304 92 aaKnown RBP13.64□□□□□ -0.23
SNX11-207ENST00000580875 RNASEKQ6P5S7 137 aaKnown RBP13.64□□□□□ -0.23
SNX11-207ENST00000580875 FA2HQ7L5A8 372 aa13.64□□□□□ -0.23
SNX11-207ENST00000580875 PRSS3P2Q8NHM4 247 aa13.64□□□□□ -0.23
SNX11-207ENST00000580875 CHCHD7Q9BUK0 85 aa13.64□□□□□ -0.23
SNX11-207ENST00000580875 ST20Q9HBF5 79 aa13.64□□□□□ -0.23
SNX11-207ENST00000580875 NIT2Q9NQR4 276 aa13.64□□□□□ -0.23
SNX11-207ENST00000580875 TRBV6-5A0A0K0K1A5 114 aa13.63□□□□□ -0.23
SNX11-207ENST00000580875 C5orf52A6NGY3 159 aa13.63□□□□□ -0.23
SNX11-207ENST00000580875 PMCHP20382 165 aa13.63□□□□□ -0.23
SNX11-207ENST00000580875 CHAC1Q9BUX1 264 aa13.63□□□□□ -0.23
SNX11-207ENST00000580875 NXT2Q9NPJ8 142 aaKnown RBP13.63□□□□□ -0.23
SNX11-207ENST00000580875 TRBV10-1A0A0K0K1A3 114 aa13.62□□□□□ -0.23
SNX11-207ENST00000580875 PRSS47A8MTI9 375 aa13.62□□□□□ -0.23
SNX11-207ENST00000580875 UBE2WQ96B02 151 aa13.62□□□□□ -0.23
SNX11-207ENST00000580875 CHCHD1Q96BP2 118 aaKnown RBP13.62□□□□□ -0.23
SNX11-207ENST00000580875 SMIM2Q9BVW6 85 aa13.62□□□□□ -0.23
SNX11-207ENST00000580875 IFI27P40305 119 aaPredicted RBP13.61□□□□□ -0.23
SNX11-207ENST00000580875 LINC00310P59036 64 aa13.61□□□□□ -0.23
SNX11-207ENST00000580875 HSBP1O75506 76 aa13.6□□□□□ -0.23
SNX11-207ENST00000580875 LINC00614P0C842 121 aa13.6□□□□□ -0.23
SNX11-207ENST00000580875 ESDP10768 282 aa13.6□□□□□ -0.23
SNX11-207ENST00000580875 RPL32P62910 135 aaKnown RBP13.6□□□□□ -0.23
SNX11-207ENST00000580875 RPL36AP83881 106 aaKnown RBP13.6□□□□□ -0.23
SNX11-207ENST00000580875 Q8N8P6 123 aa13.6□□□□□ -0.23
SNX11-207ENST00000580875 RPL36ALQ969Q0 106 aaKnown RBP13.6□□□□□ -0.23
SNX11-207ENST00000580875 AP5S1Q9NUS5 200 aa13.6□□□□□ -0.23
SNX11-207ENST00000580875 TRBV7-3A0A075B6L6 115 aa13.59□□□□□ -0.23
SNX11-207ENST00000580875 SDHAF1A6NFY7 115 aa13.59□□□□□ -0.23
SNX11-207ENST00000580875 S100A2P29034 98 aa13.59□□□□□ -0.23
SNX11-207ENST00000580875 UBE2D3P61077 147 aa13.59□□□□□ -0.23
SNX11-207ENST00000580875 UBE2D2P62837 147 aa13.59□□□□□ -0.23
SNX11-207ENST00000580875 PDZD11Q5EBL8 140 aa13.59□□□□□ -0.23
SNX11-207ENST00000580875 HIST3H2BBQ8N257 126 aa13.59□□□□□ -0.23
SNX11-207ENST00000580875 NEXN-AS1Q8NBZ9 246 aa13.59□□□□□ -0.23
SNX11-207ENST00000580875 CIRBP-AS1Q8TBR5 109 aa13.59□□□□□ -0.23
SNX11-207ENST00000580875 URB1-AS1Q96HZ7 61 aa13.59□□□□□ -0.23
SNX11-207ENST00000580875 KRTAP10-4P60372 401 aaPredicted RBP13.58□□□□□ -0.24
SNX11-207ENST00000580875 NUPR1O60356 82 aa13.57□□□□□ -0.24
SNX11-207ENST00000580875 C14orf177Q52M58 125 aa13.57□□□□□ -0.24
SNX11-207ENST00000580875 TMEM262E9PQX1 116 aa13.56□□□□□ -0.24
SNX11-207ENST00000580875 VCYO14598 125 aa13.56□□□□□ -0.24
SNX11-207ENST00000580875 POLR2KP53803 58 aaKnown RBP13.56□□□□□ -0.24
SNX11-207ENST00000580875 C1orf43Q9BWL3 253 aa13.56□□□□□ -0.24
SNX11-207ENST00000580875 LINC01546A6NGU7 62 aa13.55□□□□□ -0.24
SNX11-207ENST00000580875 K7EMI3 77 aa13.55□□□□□ -0.24
SNX11-207ENST00000580875 AMTP48728 403 aa13.55□□□□□ -0.24
SNX11-207ENST00000580875 TMEM18Q96B42 140 aa13.55□□□□□ -0.24
SNX11-207ENST00000580875 KIR2DL4Q99706 377 aa13.55□□□□□ -0.24
SNX11-207ENST00000580875 TRBV6-8A0A0A6YYG3 113 aa13.54□□□□□ -0.24
SNX11-207ENST00000580875 TRBV27A0A0K0K1C4 114 aa13.54□□□□□ -0.24
SNX11-207ENST00000580875 CRPP02741 224 aa13.54□□□□□ -0.24
SNX11-207ENST00000580875 SERTAD4-AS1Q5TG53 156 aa13.54□□□□□ -0.24
SNX11-207ENST00000580875 I3L3M4 83 aa13.53□□□□□ -0.24
SNX11-207ENST00000580875 TCAPO15273 167 aa13.53□□□□□ -0.24
SNX11-207ENST00000580875 ENHOQ6UWT2 76 aa13.53□□□□□ -0.24
SNX11-207ENST00000580875 IGHV1-24A0A0C4DH33 117 aa13.52□□□□□ -0.25
SNX11-207ENST00000580875 OXTP01178 125 aa13.52□□□□□ -0.25
SNX11-207ENST00000580875 ORMDL2Q53FV1 153 aa13.52□□□□□ -0.25
SNX11-207ENST00000580875 FAM19A2Q8N3H0 131 aa13.52□□□□□ -0.25
SNX11-207ENST00000580875 FABP4P15090 132 aa13.51□□□□□ -0.25
SNX11-207ENST00000580875 FCER1GP30273 86 aa13.51□□□□□ -0.25
SNX11-207ENST00000580875 PMCHL1Q16048 86 aa13.51□□□□□ -0.25
SNX11-207ENST00000580875 MPV17L2Q567V2 206 aa13.51□□□□□ -0.25
SNX11-207ENST00000580875 PACRGQ96M98 296 aaPredicted RBP13.51□□□□□ -0.25
SNX11-207ENST00000580875 HIST1H2BLQ99880 126 aa13.51□□□□□ -0.25
SNX11-207ENST00000580875 LRP1Q07954 4544 aaKnown RBP13.51□□□□□ -0.25
SNX11-207ENST00000580875 HBDP02042 147 aa13.5□□□□□ -0.25
SNX11-207ENST00000580875 ANGP03950 147 aaKnown RBP13.5□□□□□ -0.25
SNX11-207ENST00000580875 PKIAP61925 76 aa13.5□□□□□ -0.25
SNX11-207ENST00000580875 IFITM10A6NMD0 228 aa13.49□□□□□ -0.25
SNX11-207ENST00000580875 LOC105371267A0A1B0GV96 52 aa13.48□□□□□ -0.25
SNX11-207ENST00000580875 TSHBP01222 138 aa13.48□□□□□ -0.25
SNX11-207ENST00000580875 COTL1Q14019 142 aa13.48□□□□□ -0.25
SNX11-207ENST00000580875 CHCHD5Q9BSY4 110 aa13.48□□□□□ -0.25
SNX11-207ENST00000580875 USP17L23D6RBM5 183 aa13.47□□□□□ -0.25
SNX11-207ENST00000580875 G0S2P27469 103 aa13.47□□□□□ -0.25
SNX11-207ENST00000580875 MIAQ16674 131 aa13.47□□□□□ -0.25
SNX11-207ENST00000580875 A0A096LNJ9 63 aa13.45□□□□□ -0.26
SNX11-207ENST00000580875 LEPROTL1O95214 131 aa13.45□□□□□ -0.26
SNX11-207ENST00000580875 RPL37AP61513 92 aaKnown RBP13.45□□□□□ -0.26
SNX11-207ENST00000580875 TMEM97Q5BJF2 176 aa13.45□□□□□ -0.26
SNX11-207ENST00000580875 HSPB8Q9UJY1 196 aa13.45□□□□□ -0.26
SNX11-207ENST00000580875 PRSS1P07477 247 aa13.44□□□□□ -0.26
SNX11-207ENST00000580875 DGAT2L7PQ6IED9 249 aa13.44□□□□□ -0.26
SNX11-207ENST00000580875 LINC01549A6NIU2 74 aa13.43□□□□□ -0.26
SNX11-207ENST00000580875 AKR1D1P51857 326 aa13.43□□□□□ -0.26
SNX11-207ENST00000580875 NTM-AS1Q6ZSK4 140 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms