RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 PPP1R2P9O14990 202 aa17.29■□□□□ 0.36
LINC00271-207ENST00000580741 S100A8P05109 93 aa17.29■□□□□ 0.36
LINC00271-207ENST00000580741 CLLU1Q5K131 121 aa17.29■□□□□ 0.36
LINC00271-207ENST00000580741 LINC00862A6NCI5 91 aa17.28■□□□□ 0.36
LINC00271-207ENST00000580741 D6R8Y8 96 aa17.28■□□□□ 0.36
LINC00271-207ENST00000580741 F8W036 122 aa17.28■□□□□ 0.36
LINC00271-207ENST00000580741 SLPIP03973 132 aa17.28■□□□□ 0.36
LINC00271-207ENST00000580741 CNBPP62633 177 aaKnown RBP17.28■□□□□ 0.36
LINC00271-207ENST00000580741 MRPL52Q86TS9 123 aaKnown RBP17.28■□□□□ 0.36
LINC00271-207ENST00000580741 KIR2DL4Q99706 377 aa17.28■□□□□ 0.36
LINC00271-207ENST00000580741 CDC42SE2Q9NRR3 84 aa17.28■□□□□ 0.36
LINC00271-207ENST00000580741 AP5S1Q9NUS5 200 aa17.28■□□□□ 0.36
LINC00271-207ENST00000580741 LINC00959A0A1B0GUT2 108 aa17.27■□□□□ 0.36
LINC00271-207ENST00000580741 XCL1P47992 114 aa17.27■□□□□ 0.36
LINC00271-207ENST00000580741 HIGD2BQ4VC39 106 aa17.27■□□□□ 0.36
LINC00271-207ENST00000580741 TNFRSF6BO95407 300 aa17.26■□□□□ 0.35
LINC00271-207ENST00000580741 PNRC1Q12796 327 aaPredicted RBP17.26■□□□□ 0.35
LINC00271-207ENST00000580741 FOXI1Q12951 378 aa17.26■□□□□ 0.35
LINC00271-207ENST00000580741 C20orf78Q9BR46 151 aa17.26■□□□□ 0.35
LINC00271-207ENST00000580741 TRBV24-1A0A075B6N3 115 aa17.25■□□□□ 0.35
LINC00271-207ENST00000580741 CCL25O15444 150 aa17.25■□□□□ 0.35
LINC00271-207ENST00000580741 IFITM2Q01629 132 aa17.25■□□□□ 0.35
LINC00271-207ENST00000580741 CFAP161Q6P656 301 aa17.25■□□□□ 0.35
LINC00271-207ENST00000580741 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.25■□□□□ 0.35
LINC00271-207ENST00000580741 PANO1I0J062 215 aa17.24■□□□□ 0.35
LINC00271-207ENST00000580741 NPYP01303 97 aa17.24■□□□□ 0.35
LINC00271-207ENST00000580741 SDIM1Q6ZPB5 146 aa17.24■□□□□ 0.35
LINC00271-207ENST00000580741 ATP5L2Q7Z4Y8 100 aa17.24■□□□□ 0.35
LINC00271-207ENST00000580741 ZNF664Q8N3J9 261 aa17.24■□□□□ 0.35
LINC00271-207ENST00000580741 MT-ND4LP03901 98 aa17.23■□□□□ 0.35
LINC00271-207ENST00000580741 PLA2G1BP04054 148 aaKnown RBP17.23■□□□□ 0.35
LINC00271-207ENST00000580741 RNASE13Q5GAN3 156 aaKnown RBP17.23■□□□□ 0.35
LINC00271-207ENST00000580741 UBE2D4Q9Y2X8 147 aa17.23■□□□□ 0.35
LINC00271-207ENST00000580741 SMIM2Q9BVW6 85 aa17.22■□□□□ 0.35
LINC00271-207ENST00000580741 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.21■□□□□ 0.35
LINC00271-207ENST00000580741 RPL32P62910 135 aaKnown RBP17.21■□□□□ 0.35
LINC00271-207ENST00000580741 ANAPC16Q96DE5 110 aa17.21■□□□□ 0.35
LINC00271-207ENST00000580741 IGHV3-64A0A075B6Q5 118 aa17.2■□□□□ 0.34
LINC00271-207ENST00000580741 SS18Q15532 418 aa17.2■□□□□ 0.34
LINC00271-207ENST00000580741 Q6ZUT4 128 aa17.19■□□□□ 0.34
LINC00271-207ENST00000580741 HERC1Q15751 4861 aa17.18■□□□□ 0.34
LINC00271-207ENST00000580741 RPL39P62891 51 aaKnown RBP17.18■□□□□ 0.34
LINC00271-207ENST00000580741 ORMDL3Q8N138 153 aa17.18■□□□□ 0.34
LINC00271-207ENST00000580741 GVQW2A0A096LPI5 108 aaPredicted RBP17.17■□□□□ 0.34
LINC00271-207ENST00000580741 TCAPO15273 167 aa17.17■□□□□ 0.34
LINC00271-207ENST00000580741 PPBPP02775 128 aa17.17■□□□□ 0.34
LINC00271-207ENST00000580741 ADCYAP1P18509 176 aa17.17■□□□□ 0.34
LINC00271-207ENST00000580741 TMEM136Q6ZRR5 245 aa17.17■□□□□ 0.34
LINC00271-207ENST00000580741 CSDC2Q9Y534 153 aaKnown RBP17.17■□□□□ 0.34
LINC00271-207ENST00000580741 PHOX2AO14813 284 aa17.16■□□□□ 0.34
LINC00271-207ENST00000580741 CHTF8P0CG12 524 aa17.16■□□□□ 0.34
LINC00271-207ENST00000580741 SMAGPQ0VAQ4 97 aa17.16■□□□□ 0.34
LINC00271-207ENST00000580741 TMEM18Q96B42 140 aa17.16■□□□□ 0.34
LINC00271-207ENST00000580741 PRELID3AQ96N28 172 aa17.16■□□□□ 0.34
LINC00271-207ENST00000580741 CD164L2Q6UWJ8 174 aa17.15■□□□□ 0.34
LINC00271-207ENST00000580741 LINC00526Q96FQ7 95 aa17.15■□□□□ 0.34
LINC00271-207ENST00000580741 TRAV13-1A0A0B4J241 112 aa17.14■□□□□ 0.33
LINC00271-207ENST00000580741 TIMM21Q9BVV7 248 aa17.14■□□□□ 0.33
LINC00271-207ENST00000580741 IGHV1-58A0A0C4DH39 117 aa17.13■□□□□ 0.33
LINC00271-207ENST00000580741 UQCC3Q6UW78 93 aa17.13■□□□□ 0.33
LINC00271-207ENST00000580741 TMEM218A2RU14 115 aa17.12■□□□□ 0.33
LINC00271-207ENST00000580741 KRTAP10-4P60372 401 aaPredicted RBP17.12■□□□□ 0.33
LINC00271-207ENST00000580741 DMBT1Q9UGM3 2413 aaPredicted RBP17.12■□□□□ 0.33
LINC00271-207ENST00000580741 CIRBPQ14011 172 aaKnown RBP17.11■□□□□ 0.33
LINC00271-207ENST00000580741 C1orf196B1AJZ1 125 aa17.1■□□□□ 0.33
LINC00271-207ENST00000580741 COX6A2Q02221 97 aa17.1■□□□□ 0.33
LINC00271-207ENST00000580741 OPRPNQ99935 248 aaPredicted RBP17.1■□□□□ 0.33
LINC00271-207ENST00000580741 PKHD1L1Q86WI1 4243 aa17.09■□□□□ 0.33
LINC00271-207ENST00000580741 LOC389332A0A1B0GUA5 103 aa17.09■□□□□ 0.33
LINC00271-207ENST00000580741 FAM104AQ969W3 186 aa17.09■□□□□ 0.33
LINC00271-207ENST00000580741 DPH3Q96FX2 82 aa17.09■□□□□ 0.33
LINC00271-207ENST00000580741 PRSS3P2Q8NHM4 247 aa17.08■□□□□ 0.32
LINC00271-207ENST00000580741 SPACA4Q8TDM5 124 aa17.08■□□□□ 0.32
LINC00271-207ENST00000580741 SPANXA1Q9NS26 97 aa17.08■□□□□ 0.32
LINC00271-207ENST00000580741 RAB5AP20339 215 aa17.07■□□□□ 0.32
LINC00271-207ENST00000580741 A0A087WYN8 130 aa17.06■□□□□ 0.32
LINC00271-207ENST00000580741 COX7A2LO14548 114 aa17.06■□□□□ 0.32
LINC00271-207ENST00000580741 MALP21145 153 aa17.06■□□□□ 0.32
LINC00271-207ENST00000580741 RPL37AP61513 92 aaKnown RBP17.06■□□□□ 0.32
LINC00271-207ENST00000580741 COMMD7Q86VX2 200 aa17.06■□□□□ 0.32
LINC00271-207ENST00000580741 IGKV2-24A0A0C4DH68 120 aa17.05■□□□□ 0.32
LINC00271-207ENST00000580741 C5orf38Q86SI9 138 aa17.05■□□□□ 0.32
LINC00271-207ENST00000580741 MAP1LC3AQ9H492 121 aa17.05■□□□□ 0.32
LINC00271-207ENST00000580741 LAMTOR2Q9Y2Q5 125 aa17.05■□□□□ 0.32
LINC00271-207ENST00000580741 ZNF561-AS1K7EIQ3 104 aa17.04■□□□□ 0.32
LINC00271-207ENST00000580741 CARD19Q96LW7 228 aa17.04■□□□□ 0.32
LINC00271-207ENST00000580741 IMMP2LQ96T52 175 aa17.03■□□□□ 0.32
LINC00271-207ENST00000580741 LRP1Q07954 4544 aaKnown RBP17.02■□□□□ 0.32
LINC00271-207ENST00000580741 PRSS47A8MTI9 375 aa17.02■□□□□ 0.32
LINC00271-207ENST00000580741 MRPS36P82909 103 aaKnown RBP17.02■□□□□ 0.32
LINC00271-207ENST00000580741 SEC11CQ9BY50 192 aa17.02■□□□□ 0.32
LINC00271-207ENST00000580741 FAT3Q8TDW7 4589 aa17.02■□□□□ 0.31
LINC00271-207ENST00000580741 IGLV4-69A0A075B6H9 119 aa17.01■□□□□ 0.31
LINC00271-207ENST00000580741 MAJINQ3KP22 176 aa17.01■□□□□ 0.31
LINC00271-207ENST00000580741 CTDSP1Q9GZU7 261 aa17.01■□□□□ 0.31
LINC00271-207ENST00000580741 A0A096LNI7 61 aa17■□□□□ 0.31
LINC00271-207ENST00000580741 IFITM10A6NMD0 228 aa17■□□□□ 0.31
LINC00271-207ENST00000580741 SYCNQ0VAF6 134 aa17■□□□□ 0.31
LINC00271-207ENST00000580741 IFI27P40305 119 aaPredicted RBP16.99■□□□□ 0.31
LINC00271-207ENST00000580741 Q8N8P6 123 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms