RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	KCNIP2	Q9NS61	270 aa		3.38	□□□□□ -1.87
KPNB1-209	ENST00000580158	LINC00846	Q9NV44	126 aa		3.38	□□□□□ -1.87
KPNB1-209	ENST00000580158	RSL24D1	Q9UHA3	163 aa	Known RBP	3.38	□□□□□ -1.87
KPNB1-209	ENST00000580158	GRIFIN	A4D1Z8	144 aa		3.37	□□□□□ -1.87
KPNB1-209	ENST00000580158	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	3.37	□□□□□ -1.87
KPNB1-209	ENST00000580158	CFC1	P0CG37	223 aa		3.37	□□□□□ -1.87
KPNB1-209	ENST00000580158	PVALB	P20472	110 aa	Predicted RBP	3.37	□□□□□ -1.87
KPNB1-209	ENST00000580158	XCL1	P47992	114 aa		3.37	□□□□□ -1.87
KPNB1-209	ENST00000580158	MEF2B	Q02080	365 aa	Predicted RBP	3.37	□□□□□ -1.87
KPNB1-209	ENST00000580158	AMMECR1L	Q6DCA0	310 aa		3.37	□□□□□ -1.87
KPNB1-209	ENST00000580158	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	3.37	□□□□□ -1.87
KPNB1-209	ENST00000580158	MED28	Q9H204	178 aa		3.37	□□□□□ -1.87
KPNB1-209	ENST00000580158	WFDC1	Q9HC57	220 aa		3.37	□□□□□ -1.87
KPNB1-209	ENST00000580158	VCX3A	Q9NNX9	186 aa		3.37	□□□□□ -1.87
KPNB1-209	ENST00000580158	IGKV2D-26	A0A0A0MRZ7	120 aa		3.36	□□□□□ -1.87
KPNB1-209	ENST00000580158	C19orf71	A6NCJ1	209 aa		3.36	□□□□□ -1.87
KPNB1-209	ENST00000580158	KRBOX1	C9JBD0	128 aa		3.36	□□□□□ -1.87
KPNB1-209	ENST00000580158	C17orf112	F2Z3M2	114 aa		3.36	□□□□□ -1.87
KPNB1-209	ENST00000580158	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	3.36	□□□□□ -1.87
KPNB1-209	ENST00000580158		M0R036	132 aa		3.36	□□□□□ -1.87
KPNB1-209	ENST00000580158	RGS5	O15539	181 aa		3.36	□□□□□ -1.87
KPNB1-209	ENST00000580158	SMIM17	P0DL12	118 aa		3.36	□□□□□ -1.87
KPNB1-209	ENST00000580158	SULT1A1	P50225	295 aa		3.36	□□□□□ -1.87
KPNB1-209	ENST00000580158	TMBIM6	P55061	237 aa		3.36	□□□□□ -1.87
KPNB1-209	ENST00000580158	KRTAP6-3	Q3LI67	103 aa		3.36	□□□□□ -1.87
KPNB1-209	ENST00000580158	KIAA1644	Q3SXP7	199 aa		3.36	□□□□□ -1.87
KPNB1-209	ENST00000580158	UQCC3	Q6UW78	93 aa		3.36	□□□□□ -1.87
KPNB1-209	ENST00000580158	STX12	Q86Y82	276 aa		3.36	□□□□□ -1.87
KPNB1-209	ENST00000580158	OR5A1	Q8NGJ0	315 aa		3.36	□□□□□ -1.87
KPNB1-209	ENST00000580158	LSM5	Q9Y4Y9	91 aa	Known RBP	3.36	□□□□□ -1.87
KPNB1-209	ENST00000580158	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.35	□□□□□ -1.87
KPNB1-209	ENST00000580158	FAM168B	A1KXE4	195 aa		3.35	□□□□□ -1.87
KPNB1-209	ENST00000580158		M0QXV9	152 aa		3.35	□□□□□ -1.87
KPNB1-209	ENST00000580158	CCL25	O15444	150 aa		3.35	□□□□□ -1.87
KPNB1-209	ENST00000580158	NUPR1	O60356	82 aa		3.35	□□□□□ -1.87
KPNB1-209	ENST00000580158	TCRA	P04437	139 aa		3.35	□□□□□ -1.87
KPNB1-209	ENST00000580158	RPL12	P30050	165 aa	Known RBP	3.35	□□□□□ -1.87
KPNB1-209	ENST00000580158	RPL28	P46779	137 aa	Known RBP	3.35	□□□□□ -1.87
KPNB1-209	ENST00000580158	AP3S2	P59780	193 aa		3.35	□□□□□ -1.87
KPNB1-209	ENST00000580158	IL15RA	Q13261	267 aa		3.35	□□□□□ -1.87
KPNB1-209	ENST00000580158	C6orf226	Q5I0X4	101 aa		3.35	□□□□□ -1.87
KPNB1-209	ENST00000580158	RNASEK	Q6P5S7	137 aa	Known RBP	3.35	□□□□□ -1.87
KPNB1-209	ENST00000580158	COX6B2	Q6YFQ2	88 aa		3.35	□□□□□ -1.87
KPNB1-209	ENST00000580158	DAND5	Q8N907	189 aa		3.35	□□□□□ -1.87
KPNB1-209	ENST00000580158	C5orf17	Q8NAS9	161 aa		3.35	□□□□□ -1.87
KPNB1-209	ENST00000580158	IMMP2L	Q96T52	175 aa		3.35	□□□□□ -1.87
KPNB1-209	ENST00000580158	KIR2DL4	Q99706	377 aa		3.35	□□□□□ -1.87
KPNB1-209	ENST00000580158	OPRPN	Q99935	248 aa	Predicted RBP	3.35	□□□□□ -1.87
KPNB1-209	ENST00000580158	ZNF471	Q9BX82	626 aa	Predicted RBP	3.35	□□□□□ -1.87
KPNB1-209	ENST00000580158	UBE2D4	Q9Y2X8	147 aa		3.35	□□□□□ -1.87
KPNB1-209	ENST00000580158	ESD	P10768	282 aa		3.34	□□□□□ -1.87
KPNB1-209	ENST00000580158	COTL1	Q14019	142 aa		3.34	□□□□□ -1.87
KPNB1-209	ENST00000580158	KRTAP20-1	Q3LI63	56 aa		3.34	□□□□□ -1.87
KPNB1-209	ENST00000580158	KRTAP13-2	Q52LG2	175 aa		3.34	□□□□□ -1.87
KPNB1-209	ENST00000580158	SPAG11A	Q6PDA7	123 aa		3.34	□□□□□ -1.87
KPNB1-209	ENST00000580158	TMEM252	Q8N6L7	170 aa		3.34	□□□□□ -1.87
KPNB1-209	ENST00000580158	PRAC1	Q96KF2	57 aa		3.34	□□□□□ -1.87
KPNB1-209	ENST00000580158	PGLYRP4	Q96LB8	373 aa		3.34	□□□□□ -1.87
KPNB1-209	ENST00000580158	ANAPC11	Q9NYG5	84 aa		3.34	□□□□□ -1.87
KPNB1-209	ENST00000580158	TMSB15B	A0A087X1C1	80 aa		3.33	□□□□□ -1.88
KPNB1-209	ENST00000580158	BCL2L11	O43521	198 aa		3.33	□□□□□ -1.88
KPNB1-209	ENST00000580158	ATP6V1G2	O95670	118 aa		3.33	□□□□□ -1.88
KPNB1-209	ENST00000580158	FAM229B	Q4G0N7	80 aa		3.33	□□□□□ -1.88
KPNB1-209	ENST00000580158	TOMM5	Q8N4H5	51 aa		3.33	□□□□□ -1.88
KPNB1-209	ENST00000580158	OR2D3	Q8NGH3	330 aa		3.33	□□□□□ -1.88
KPNB1-209	ENST00000580158	BTF3L4	Q96K17	158 aa		3.33	□□□□□ -1.88
KPNB1-209	ENST00000580158	CSDC2	Q9Y534	153 aa	Known RBP	3.33	□□□□□ -1.88
KPNB1-209	ENST00000580158	SSPO	A2VEC9	5147 aa		3.33	□□□□□ -1.88
KPNB1-209	ENST00000580158	MACF1	Q9UPN3	7388 aa	Known RBP	3.32	□□□□□ -1.88
KPNB1-209	ENST00000580158	IGLV8-61	A0A075B6I0	122 aa		3.32	□□□□□ -1.88
KPNB1-209	ENST00000580158	LINC00959	A0A1B0GUT2	108 aa		3.32	□□□□□ -1.88
KPNB1-209	ENST00000580158		A0A1W2PPV4	95 aa		3.32	□□□□□ -1.88
KPNB1-209	ENST00000580158	SMIM1	B2RUZ4	78 aa		3.32	□□□□□ -1.88
KPNB1-209	ENST00000580158	NDUFB6	O95139	128 aa		3.32	□□□□□ -1.88
KPNB1-209	ENST00000580158	S100A9	P06702	114 aa	Known RBP	3.32	□□□□□ -1.88
KPNB1-209	ENST00000580158	NKX2-5	P52952	324 aa	Predicted RBP	3.32	□□□□□ -1.88
KPNB1-209	ENST00000580158	CNPY1	Q3B7I2	92 aa		3.32	□□□□□ -1.88
KPNB1-209	ENST00000580158	SPANXN1	Q5VSR9	72 aa		3.32	□□□□□ -1.88
KPNB1-209	ENST00000580158	LINC01561	Q8N1V8	128 aa		3.32	□□□□□ -1.88
KPNB1-209	ENST00000580158	TMEM101	Q96IK0	257 aa		3.32	□□□□□ -1.88
KPNB1-209	ENST00000580158	GEMIN7	Q9H840	131 aa	Known RBP	3.32	□□□□□ -1.88
KPNB1-209	ENST00000580158	NDUFA12	Q9UI09	145 aa		3.32	□□□□□ -1.88
KPNB1-209	ENST00000580158	EPDR1	Q9UM22	224 aa		3.32	□□□□□ -1.88
KPNB1-209	ENST00000580158	ARL2-SNX15	V9GYD0	113 aa		3.32	□□□□□ -1.88
KPNB1-209	ENST00000580158	IGSF23	A1L1A6	192 aa		3.31	□□□□□ -1.88
KPNB1-209	ENST00000580158	NAP1L6	A6NFF2	107 aa		3.31	□□□□□ -1.88
KPNB1-209	ENST00000580158		H7C423	109 aa		3.31	□□□□□ -1.88
KPNB1-209	ENST00000580158		M0QY20	66 aa		3.31	□□□□□ -1.88
KPNB1-209	ENST00000580158	SH2D1A	O60880	128 aa		3.31	□□□□□ -1.88
KPNB1-209	ENST00000580158	MGP	P08493	103 aa		3.31	□□□□□ -1.88
KPNB1-209	ENST00000580158	LINC00242	Q5T6M2	205 aa		3.31	□□□□□ -1.88
KPNB1-209	ENST00000580158	OR10AG1	Q8NH19	301 aa		3.31	□□□□□ -1.88
KPNB1-209	ENST00000580158	WDR61	Q9GZS3	305 aa	Known RBP	3.31	□□□□□ -1.88
KPNB1-209	ENST00000580158	COX7A2L	O14548	114 aa		3.3	□□□□□ -1.88
KPNB1-209	ENST00000580158	TLX1NB	P0CAT3	122 aa		3.3	□□□□□ -1.88
KPNB1-209	ENST00000580158	ZNF25	P17030	456 aa	Predicted RBP	3.3	□□□□□ -1.88
KPNB1-209	ENST00000580158	CRIP1	P50238	77 aa		3.3	□□□□□ -1.88
KPNB1-209	ENST00000580158	TMEM241	Q24JQ0	296 aa		3.3	□□□□□ -1.88
KPNB1-209	ENST00000580158	RASL11A	Q6T310	242 aa		3.3	□□□□□ -1.88
KPNB1-209	ENST00000580158	AP1S3	Q96PC3	154 aa		3.3	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms