RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 DSCR8Q96T75 97 aa10.07□□□□□ -0.8
TRAPPC8-207ENST00000580104 TRBV6-5A0A0K0K1A5 114 aa10.07□□□□□ -0.8
TRAPPC8-207ENST00000580104 ZNF561-AS1K7EIQ3 104 aa10.07□□□□□ -0.8
TRAPPC8-207ENST00000580104 COX7A2LO14548 114 aa10.07□□□□□ -0.8
TRAPPC8-207ENST00000580104 RPL32P62910 135 aaKnown RBP10.07□□□□□ -0.8
TRAPPC8-207ENST00000580104 Q6ZSV7 163 aa10.07□□□□□ -0.8
TRAPPC8-207ENST00000580104 PSMG3-AS1Q96PY0 264 aa10.07□□□□□ -0.8
TRAPPC8-207ENST00000580104 IGLV4-69A0A075B6H9 119 aa10.07□□□□□ -0.8
TRAPPC8-207ENST00000580104 COX8CQ7Z4L0 72 aa10.06□□□□□ -0.8
TRAPPC8-207ENST00000580104 TMEM263Q8WUH6 116 aaKnown RBP10.06□□□□□ -0.8
TRAPPC8-207ENST00000580104 CCDC179H3BU77 68 aa10.05□□□□□ -0.8
TRAPPC8-207ENST00000580104 SPANXDQ9BXN6 97 aa10.05□□□□□ -0.8
TRAPPC8-207ENST00000580104 VCANP13611 3396 aa10.05□□□□□ -0.8
TRAPPC8-207ENST00000580104 LINC00643Q86TS7 51 aa10.05□□□□□ -0.8
TRAPPC8-207ENST00000580104 VPS13AQ96RL7 3174 aa10.05□□□□□ -0.8
TRAPPC8-207ENST00000580104 RBMY1FQ15415 496 aaKnown RBP10.05□□□□□ -0.8
TRAPPC8-207ENST00000580104 ODF3Q96PU9 254 aa10.05□□□□□ -0.8
TRAPPC8-207ENST00000580104 ATOX1O00244 68 aa10.04□□□□□ -0.8
TRAPPC8-207ENST00000580104 SDIM1Q6ZPB5 146 aa10.04□□□□□ -0.8
TRAPPC8-207ENST00000580104 DCANP1Q8TF63 244 aa10.04□□□□□ -0.8
TRAPPC8-207ENST00000580104 DEFB4AO15263 64 aa10.04□□□□□ -0.8
TRAPPC8-207ENST00000580104 C16orf74Q96GX8 76 aa10.04□□□□□ -0.8
TRAPPC8-207ENST00000580104 SLPIP03973 132 aa10.03□□□□□ -0.8
TRAPPC8-207ENST00000580104 POM121L12Q8N7R1 296 aa10.03□□□□□ -0.8
TRAPPC8-207ENST00000580104 JMJD1CQ15652 2540 aa10.03□□□□□ -0.8
TRAPPC8-207ENST00000580104 NCR3O14931 201 aa10.02□□□□□ -0.81
TRAPPC8-207ENST00000580104 MTORP42345 2549 aa10.02□□□□□ -0.81
TRAPPC8-207ENST00000580104 CELSR3Q9NYQ7 3312 aa10.02□□□□□ -0.81
TRAPPC8-207ENST00000580104 C9orf85Q96MD7 179 aa10.02□□□□□ -0.81
TRAPPC8-207ENST00000580104 COL4A2P08572 1712 aa10.02□□□□□ -0.81
TRAPPC8-207ENST00000580104 A0A1W2PPR1 153 aa10.02□□□□□ -0.81
TRAPPC8-207ENST00000580104 H7C423 109 aa10.02□□□□□ -0.81
TRAPPC8-207ENST00000580104 UBE2D3P61077 147 aa10.02□□□□□ -0.81
TRAPPC8-207ENST00000580104 UBE2D2P62837 147 aa10.02□□□□□ -0.81
TRAPPC8-207ENST00000580104 WDFY4Q6ZS81 3184 aa10.02□□□□□ -0.81
TRAPPC8-207ENST00000580104 TMEM89A2RUT3 159 aa10.01□□□□□ -0.81
TRAPPC8-207ENST00000580104 LRRK2Q5S007 2527 aa10.01□□□□□ -0.81
TRAPPC8-207ENST00000580104 PRRC2AP48634 2157 aaKnown RBP10.01□□□□□ -0.81
TRAPPC8-207ENST00000580104 PYGO1Q9Y3Y4 419 aa10□□□□□ -0.81
TRAPPC8-207ENST00000580104 PSMB8P28062 276 aa10□□□□□ -0.81
TRAPPC8-207ENST00000580104 C18orf65Q6ZTR6 163 aa10□□□□□ -0.81
TRAPPC8-207ENST00000580104 LAMA1P25391 3075 aa10□□□□□ -0.81
TRAPPC8-207ENST00000580104 NDUFA1O15239 70 aa10□□□□□ -0.81
TRAPPC8-207ENST00000580104 LST1O00453 97 aa10□□□□□ -0.81
TRAPPC8-207ENST00000580104 SPANXCQ9NY87 97 aa10□□□□□ -0.81
TRAPPC8-207ENST00000580104 TRBV10-1A0A0K0K1A3 114 aa9.99□□□□□ -0.81
TRAPPC8-207ENST00000580104 CITED2Q99967 270 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC8-207ENST00000580104 NDUFA7O95182 113 aa9.99□□□□□ -0.81
TRAPPC8-207ENST00000580104 PCSK5Q92824 1860 aa9.99□□□□□ -0.81
TRAPPC8-207ENST00000580104 UBE2D4Q9Y2X8 147 aa9.99□□□□□ -0.81
TRAPPC8-207ENST00000580104 C4orf3Q8WVX3 66 aa9.98□□□□□ -0.81
TRAPPC8-207ENST00000580104 ZFYVE26Q68DK2 2539 aa9.98□□□□□ -0.81
TRAPPC8-207ENST00000580104 DEFB105AQ8NG35 78 aa9.98□□□□□ -0.81
TRAPPC8-207ENST00000580104 DEFB114Q30KQ6 69 aa9.98□□□□□ -0.81
TRAPPC8-207ENST00000580104 ADAMTSL4-AS1Q5T5F5 129 aa9.98□□□□□ -0.81
TRAPPC8-207ENST00000580104 WFDC11Q8NEX6 87 aa9.98□□□□□ -0.81
TRAPPC8-207ENST00000580104 AVPP01185 164 aa9.97□□□□□ -0.81
TRAPPC8-207ENST00000580104 DEFB113Q30KQ7 82 aa9.97□□□□□ -0.81
TRAPPC8-207ENST00000580104 TRAV23DV6A0A075B6W5 121 aa9.97□□□□□ -0.81
TRAPPC8-207ENST00000580104 IGLV1-40P01703 118 aa9.97□□□□□ -0.81
TRAPPC8-207ENST00000580104 MRPS36P82909 103 aaKnown RBP9.97□□□□□ -0.81
TRAPPC8-207ENST00000580104 RBM3P98179 157 aaKnown RBP9.97□□□□□ -0.81
TRAPPC8-207ENST00000580104 J3KT08 172 aa9.96□□□□□ -0.81
TRAPPC8-207ENST00000580104 SZT2Q5T011 3432 aa9.96□□□□□ -0.81
TRAPPC8-207ENST00000580104 TIRAPP58753 221 aa9.96□□□□□ -0.81
TRAPPC8-207ENST00000580104 NKAPP1Q8N9T2 125 aa9.96□□□□□ -0.82
TRAPPC8-207ENST00000580104 CDIP1Q9H305 208 aa9.96□□□□□ -0.82
TRAPPC8-207ENST00000580104 LOC100131303A0A0U1RQF7 123 aa9.94□□□□□ -0.82
TRAPPC8-207ENST00000580104 SMCPP49901 116 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC8-207ENST00000580104 hADV29S1A0JD25 119 aa9.94□□□□□ -0.82
TRAPPC8-207ENST00000580104 UQCRQO14949 82 aa9.94□□□□□ -0.82
TRAPPC8-207ENST00000580104 JMJD7-PLA2G4BH0Y9G9 81 aa9.93□□□□□ -0.82
TRAPPC8-207ENST00000580104 DEFB135Q30KP9 77 aa9.93□□□□□ -0.82
TRAPPC8-207ENST00000580104 IGHV4-28A0A0C4DH34 117 aa9.92□□□□□ -0.82
TRAPPC8-207ENST00000580104 APOC4P55056 127 aa9.92□□□□□ -0.82
TRAPPC8-207ENST00000580104 Q6YL49 198 aa9.92□□□□□ -0.82
TRAPPC8-207ENST00000580104 WFDC10AQ9H1F0 79 aa9.92□□□□□ -0.82
TRAPPC8-207ENST00000580104 KLK12Q9UKR0 248 aa9.92□□□□□ -0.82
TRAPPC8-207ENST00000580104 LINC00269Q8N2A0 174 aa9.92□□□□□ -0.82
TRAPPC8-207ENST00000580104 SPAG11BQ08648 103 aa9.91□□□□□ -0.82
TRAPPC8-207ENST00000580104 C3orf22Q8N5N4 141 aa9.91□□□□□ -0.82
TRAPPC8-207ENST00000580104 F8WEM9 126 aa9.91□□□□□ -0.82
TRAPPC8-207ENST00000580104 SPEGQ15772 3267 aa9.91□□□□□ -0.82
TRAPPC8-207ENST00000580104 RPL18AQ02543 176 aaKnown RBP9.91□□□□□ -0.82
TRAPPC8-207ENST00000580104 CAMK2N2Q96S95 79 aa9.91□□□□□ -0.82
TRAPPC8-207ENST00000580104 TMEM256-PLSCR3K7ERE1 68 aa9.91□□□□□ -0.82
TRAPPC8-207ENST00000580104 TIMM17BO60830 172 aa9.91□□□□□ -0.82
TRAPPC8-207ENST00000580104 IGKV2D-24A0A075B6R9 120 aa9.9□□□□□ -0.82
TRAPPC8-207ENST00000580104 COX6A2Q02221 97 aa9.9□□□□□ -0.82
TRAPPC8-207ENST00000580104 LINC00242Q5T6M2 205 aa9.9□□□□□ -0.82
TRAPPC8-207ENST00000580104 C20orf197Q8N268 126 aa9.9□□□□□ -0.82
TRAPPC8-207ENST00000580104 PRO0461Q9UI25 63 aa9.9□□□□□ -0.82
TRAPPC8-207ENST00000580104 LINC01546A6NGU7 62 aa9.89□□□□□ -0.83
TRAPPC8-207ENST00000580104 MRAPQ8TCY5 172 aa9.89□□□□□ -0.83
TRAPPC8-207ENST00000580104 KIF25-AS1Q9Y6Z4 181 aa9.89□□□□□ -0.83
TRAPPC8-207ENST00000580104 DNAJC9-AS1A6NH13 148 aa9.89□□□□□ -0.83
TRAPPC8-207ENST00000580104 ZNF702PQ9H963 129 aa9.89□□□□□ -0.83
TRAPPC8-207ENST00000580104 NBEAQ8NFP9 2946 aa9.89□□□□□ -0.83
TRAPPC8-207ENST00000580104 FREM2Q5SZK8 3169 aa9.89□□□□□ -0.83
TRAPPC8-207ENST00000580104 Q6ZSN1 163 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 174.2 ms