RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 USP17L23D6RBM5 183 aa8.68□□□□□ -1.02
TRAF4-214ENST00000580073 KRTAP10-4P60372 401 aaPredicted RBP8.68□□□□□ -1.02
TRAF4-214ENST00000580073 SUMO2P61956 95 aaKnown RBP8.68□□□□□ -1.02
TRAF4-214ENST00000580073 COTL1Q14019 142 aa8.68□□□□□ -1.02
TRAF4-214ENST00000580073 NDUFA5Q16718 116 aa8.68□□□□□ -1.02
TRAF4-214ENST00000580073 TRBV25-1A0A075B6N4 114 aa8.67□□□□□ -1.02
TRAF4-214ENST00000580073 I3L3M4 83 aa8.67□□□□□ -1.02
TRAF4-214ENST00000580073 ESDP10768 282 aa8.67□□□□□ -1.02
TRAF4-214ENST00000580073 PMCHP20382 165 aa8.67□□□□□ -1.02
TRAF4-214ENST00000580073 S100PP25815 95 aa8.67□□□□□ -1.02
TRAF4-214ENST00000580073 KIAA1644Q3SXP7 199 aa8.67□□□□□ -1.02
TRAF4-214ENST00000580073 IGLV4-60A0A075B6I1 120 aa8.66□□□□□ -1.02
TRAF4-214ENST00000580073 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.66□□□□□ -1.02
TRAF4-214ENST00000580073 IGKV2-29A2NJV5 120 aaPredicted RBP8.66□□□□□ -1.02
TRAF4-214ENST00000580073 AMTP48728 403 aa8.66□□□□□ -1.02
TRAF4-214ENST00000580073 RBX1P62877 108 aa8.66□□□□□ -1.02
TRAF4-214ENST00000580073 ENHOQ6UWT2 76 aa8.66□□□□□ -1.02
TRAF4-214ENST00000580073 CBLN2Q8IUK8 224 aa8.66□□□□□ -1.02
TRAF4-214ENST00000580073 PRELID3AQ96N28 172 aa8.66□□□□□ -1.02
TRAF4-214ENST00000580073 TMEM243Q9BU79 118 aa8.66□□□□□ -1.02
TRAF4-214ENST00000580073 VCYO14598 125 aa8.65□□□□□ -1.02
TRAF4-214ENST00000580073 PPBPP02775 128 aa8.65□□□□□ -1.02
TRAF4-214ENST00000580073 RPL32P62910 135 aaKnown RBP8.65□□□□□ -1.02
TRAF4-214ENST00000580073 ORMDL3Q8N138 153 aa8.65□□□□□ -1.02
TRAF4-214ENST00000580073 C9orf163Q8N9P6 203 aa8.65□□□□□ -1.02
TRAF4-214ENST00000580073 C20orf203Q8NBC4 194 aa8.65□□□□□ -1.02
TRAF4-214ENST00000580073 C20orf78Q9BR46 151 aa8.65□□□□□ -1.02
TRAF4-214ENST00000580073 GNB1LQ9BYB4 327 aa8.65□□□□□ -1.02
TRAF4-214ENST00000580073 PRSS47A8MTI9 375 aa8.64□□□□□ -1.03
TRAF4-214ENST00000580073 PPP1R17O96001 155 aa8.64□□□□□ -1.03
TRAF4-214ENST00000580073 SMIM2Q9BVW6 85 aa8.64□□□□□ -1.03
TRAF4-214ENST00000580073 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.63□□□□□ -1.03
TRAF4-214ENST00000580073 PHOX2AO14813 284 aa8.63□□□□□ -1.03
TRAF4-214ENST00000580073 APCSP02743 223 aa8.63□□□□□ -1.03
TRAF4-214ENST00000580073 AP5S1Q9NUS5 200 aa8.63□□□□□ -1.03
TRAF4-214ENST00000580073 PRR34Q9NV39 138 aa8.63□□□□□ -1.03
TRAF4-214ENST00000580073 LOC389332A0A1B0GUA5 103 aa8.62□□□□□ -1.03
TRAF4-214ENST00000580073 TCAPO15273 167 aa8.62□□□□□ -1.03
TRAF4-214ENST00000580073 MRPL18Q9H0U6 180 aaKnown RBP8.62□□□□□ -1.03
TRAF4-214ENST00000580073 TRAV8-4A0A0B4J246 113 aa8.61□□□□□ -1.03
TRAF4-214ENST00000580073 A0A1B0GUV1 79 aa8.61□□□□□ -1.03
TRAF4-214ENST00000580073 SCO1O75880 301 aa8.61□□□□□ -1.03
TRAF4-214ENST00000580073 PRSS1P07477 247 aa8.61□□□□□ -1.03
TRAF4-214ENST00000580073 FGF6P10767 208 aa8.61□□□□□ -1.03
TRAF4-214ENST00000580073 CLPSL2Q6UWE3 100 aa8.61□□□□□ -1.03
TRAF4-214ENST00000580073 Q6ZRU5 148 aa8.61□□□□□ -1.03
TRAF4-214ENST00000580073 LINC00269Q8N2A0 174 aa8.61□□□□□ -1.03
TRAF4-214ENST00000580073 FAM104AQ969W3 186 aa8.61□□□□□ -1.03
TRAF4-214ENST00000580073 ALKBH7Q9BT30 221 aaPredicted RBP8.61□□□□□ -1.03
TRAF4-214ENST00000580073 FAT3Q8TDW7 4589 aa8.61□□□□□ -1.03
TRAF4-214ENST00000580073 LRP1Q07954 4544 aaKnown RBP8.61□□□□□ -1.03
TRAF4-214ENST00000580073 HMCN2Q8NDA2 5059 aa8.6□□□□□ -1.03
TRAF4-214ENST00000580073 PKHD1L1Q86WI1 4243 aa8.6□□□□□ -1.03
TRAF4-214ENST00000580073 CNBPP62633 177 aaKnown RBP8.6□□□□□ -1.03
TRAF4-214ENST00000580073 FABP9Q0Z7S8 132 aa8.6□□□□□ -1.03
TRAF4-214ENST00000580073 KRTAP26-1Q6PEX3 210 aa8.6□□□□□ -1.03
TRAF4-214ENST00000580073 SMCO4Q9NRQ5 59 aa8.6□□□□□ -1.03
TRAF4-214ENST00000580073 LAMTOR2Q9Y2Q5 125 aa8.6□□□□□ -1.03
TRAF4-214ENST00000580073 IGHV3-64A0A075B6Q5 118 aa8.59□□□□□ -1.03
TRAF4-214ENST00000580073 hDV102S1A0JD36 115 aa8.59□□□□□ -1.03
TRAF4-214ENST00000580073 UBE2L6O14933 153 aa8.59□□□□□ -1.03
TRAF4-214ENST00000580073 FCER1GP30273 86 aa8.59□□□□□ -1.03
TRAF4-214ENST00000580073 RPL39P62891 51 aaKnown RBP8.59□□□□□ -1.03
TRAF4-214ENST00000580073 REG3AQ06141 175 aa8.59□□□□□ -1.03
TRAF4-214ENST00000580073 COX19Q49B96 90 aa8.59□□□□□ -1.03
TRAF4-214ENST00000580073 KIR2DL4Q99706 377 aa8.59□□□□□ -1.03
TRAF4-214ENST00000580073 H7C423 109 aa8.58□□□□□ -1.04
TRAF4-214ENST00000580073 MT-ND6P03923 174 aa8.58□□□□□ -1.04
TRAF4-214ENST00000580073 IFI27P40305 119 aaPredicted RBP8.58□□□□□ -1.04
TRAF4-214ENST00000580073 Q8N8P6 123 aa8.58□□□□□ -1.04
TRAF4-214ENST00000580073 MAP1LC3AQ9H492 121 aa8.58□□□□□ -1.04
TRAF4-214ENST00000580073 UBE2D4Q9Y2X8 147 aa8.58□□□□□ -1.04
TRAF4-214ENST00000580073 TRAPPC1Q9Y5R8 145 aa8.58□□□□□ -1.04
TRAF4-214ENST00000580073 COLCA2A8K830 154 aa8.57□□□□□ -1.04
TRAF4-214ENST00000580073 CIRBPQ14011 172 aaKnown RBP8.57□□□□□ -1.04
TRAF4-214ENST00000580073 RNASEKQ6P5S7 137 aaKnown RBP8.57□□□□□ -1.04
TRAF4-214ENST00000580073 MRPL52Q86TS9 123 aaKnown RBP8.57□□□□□ -1.04
TRAF4-214ENST00000580073 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.57□□□□□ -1.04
TRAF4-214ENST00000580073 CFAP161Q6P656 301 aa8.56□□□□□ -1.04
TRAF4-214ENST00000580073 C7orf33Q8WU49 177 aa8.56□□□□□ -1.04
TRAF4-214ENST00000580073 URB1-AS1Q96HZ7 61 aa8.56□□□□□ -1.04
TRAF4-214ENST00000580073 OPRPNQ99935 248 aaPredicted RBP8.56□□□□□ -1.04
TRAF4-214ENST00000580073 CDC42SE2Q9NRR3 84 aa8.56□□□□□ -1.04
TRAF4-214ENST00000580073 PKIGQ9Y2B9 76 aa8.56□□□□□ -1.04
TRAF4-214ENST00000580073 IGLV10-54A0A075B6I4 117 aa8.55□□□□□ -1.04
TRAF4-214ENST00000580073 RNASE13Q5GAN3 156 aaKnown RBP8.55□□□□□ -1.04
TRAF4-214ENST00000580073 AMMECR1LQ6DCA0 310 aa8.55□□□□□ -1.04
TRAF4-214ENST00000580073 SDIM1Q6ZPB5 146 aa8.55□□□□□ -1.04
TRAF4-214ENST00000580073 DPH3Q96FX2 82 aa8.55□□□□□ -1.04
TRAF4-214ENST00000580073 IGKV3OR2-268A0A0C4DH90 116 aa8.54□□□□□ -1.04
TRAF4-214ENST00000580073 LINC01546A6NGU7 62 aa8.54□□□□□ -1.04
TRAF4-214ENST00000580073 ZNF25P17030 456 aaPredicted RBP8.54□□□□□ -1.04
TRAF4-214ENST00000580073 HNRNPA3P51991 378 aaKnown RBP8.54□□□□□ -1.04
TRAF4-214ENST00000580073 Q6ZUT4 128 aa8.54□□□□□ -1.04
TRAF4-214ENST00000580073 C18orf32Q8TCD1 76 aa8.54□□□□□ -1.04
TRAF4-214ENST00000580073 RAB5AP20339 215 aa8.53□□□□□ -1.04
TRAF4-214ENST00000580073 ZNF664Q8N3J9 261 aa8.53□□□□□ -1.04
TRAF4-214ENST00000580073 OR5A1Q8NGJ0 315 aa8.53□□□□□ -1.04
TRAF4-214ENST00000580073 SPACA4Q8TDM5 124 aa8.53□□□□□ -1.04
TRAF4-214ENST00000580073 TIMM21Q9BVV7 248 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 228.8 ms