RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 DMBT1Q9UGM3 2413 aaPredicted RBP2.43□□□□□ -2.02
CDH19-204ENST00000579658 LOC389332A0A1B0GUA5 103 aa2.43□□□□□ -2.02
CDH19-204ENST00000579658 RBAKDNA6NC62 111 aa2.43□□□□□ -2.02
CDH19-204ENST00000579658 FABP5P3A8MUU1 101 aa2.43□□□□□ -2.02
CDH19-204ENST00000579658 IGLL5B9A064 214 aa2.43□□□□□ -2.02
CDH19-204ENST00000579658 PRAC2D3DTV9 90 aa2.43□□□□□ -2.02
CDH19-204ENST00000579658 K7EP34 96 aa2.43□□□□□ -2.02
CDH19-204ENST00000579658 NPYP01303 97 aa2.43□□□□□ -2.02
CDH19-204ENST00000579658 GIG44P09565 113 aaPredicted RBP2.43□□□□□ -2.02
CDH19-204ENST00000579658 RBMY1CP0DJD4 496 aa2.43□□□□□ -2.02
CDH19-204ENST00000579658 HLA-DRB4P13762 266 aa2.43□□□□□ -2.02
CDH19-204ENST00000579658 EVI2AP22794 236 aa2.43□□□□□ -2.02
CDH19-204ENST00000579658 FCER1GP30273 86 aa2.43□□□□□ -2.02
CDH19-204ENST00000579658 CKS2P33552 79 aa2.43□□□□□ -2.02
CDH19-204ENST00000579658 ZNF80P51504 273 aaPredicted RBP2.43□□□□□ -2.02
CDH19-204ENST00000579658 CACNG7P62955 275 aa2.43□□□□□ -2.02
CDH19-204ENST00000579658 FER1L6-AS1Q8NA97 138 aa2.43□□□□□ -2.02
CDH19-204ENST00000579658 OR8A1Q8NGG7 326 aa2.43□□□□□ -2.02
CDH19-204ENST00000579658 NXT2Q9NPJ8 142 aaKnown RBP2.43□□□□□ -2.02
CDH19-204ENST00000579658 HLA-DRB4X5D2U9 266 aa2.43□□□□□ -2.02
CDH19-204ENST00000579658 FAT2Q9NYQ8 4349 aa2.42□□□□□ -2.02
CDH19-204ENST00000579658 IGLV2-18A0A075B6J9 118 aa2.42□□□□□ -2.02
CDH19-204ENST00000579658 IGHV4-4A0A075B6R2 117 aa2.42□□□□□ -2.02
CDH19-204ENST00000579658 FAM236DA0A1B0GTK5 79 aa2.42□□□□□ -2.02
CDH19-204ENST00000579658 A0A1W2PPM0 123 aa2.42□□□□□ -2.02
CDH19-204ENST00000579658 KRTAP9-7A8MTY7 169 aa2.42□□□□□ -2.02
CDH19-204ENST00000579658 PRM2P04554 102 aa2.42□□□□□ -2.02
CDH19-204ENST00000579658 SMIM17P0DL12 118 aa2.42□□□□□ -2.02
CDH19-204ENST00000579658 FAM236CP0DP71 79 aa2.42□□□□□ -2.02
CDH19-204ENST00000579658 TWIST1Q15672 202 aa2.42□□□□□ -2.02
CDH19-204ENST00000579658 OR5A1Q8NGJ0 315 aa2.42□□□□□ -2.02
CDH19-204ENST00000579658 VGLL1Q99990 258 aa2.42□□□□□ -2.02
CDH19-204ENST00000579658 IGKV2-40A0A087WW87 121 aaPredicted RBP2.42□□□□□ -2.02
CDH19-204ENST00000579658 LOC107984640A0A0U1RRK4 108 aa2.42□□□□□ -2.02
CDH19-204ENST00000579658 GAGE12HA6NDE8 117 aa2.42□□□□□ -2.02
CDH19-204ENST00000579658 KRTAP29-1A8MX34 341 aaPredicted RBP2.42□□□□□ -2.02
CDH19-204ENST00000579658 H3BMM0 161 aa2.42□□□□□ -2.02
CDH19-204ENST00000579658 H3BUT2 72 aa2.42□□□□□ -2.02
CDH19-204ENST00000579658 IGKV2D-40P01614 121 aaPredicted RBP2.42□□□□□ -2.02
CDH19-204ENST00000579658 DEFB135Q30KP9 77 aa2.42□□□□□ -2.02
CDH19-204ENST00000579658 KRTAP19-4Q3LI73 84 aa2.42□□□□□ -2.02
CDH19-204ENST00000579658 TRPT1Q86TN4 253 aaKnown RBP2.42□□□□□ -2.02
CDH19-204ENST00000579658 PCP2Q8IVA1 136 aa2.42□□□□□ -2.02
CDH19-204ENST00000579658 AP1S3Q96PC3 154 aa2.42□□□□□ -2.02
CDH19-204ENST00000579658 SIGMAR1Q99720 223 aa2.42□□□□□ -2.02
CDH19-204ENST00000579658 TIMM8BQ9Y5J9 83 aaPredicted RBP2.42□□□□□ -2.02
CDH19-204ENST00000579658 HERC1Q15751 4861 aa2.42□□□□□ -2.02
CDH19-204ENST00000579658 TMSB15BA0A087X1C1 80 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 TRAV2A0A0B4J234 112 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 SMKR1H3BMG3 65 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 DEFB4AO15263 64 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 SMIM13P0DJ93 91 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 NANOS2P60321 138 aaKnown RBP2.41□□□□□ -2.02
CDH19-204ENST00000579658 ERCC8Q13216 396 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 UBE2DNLQ8IWF7 75 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 Q8N8P6 123 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 CARD19Q96LW7 228 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 MSRB1Q9NZV6 116 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 PKHD1P08F94 4074 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 TRBV25-1A0A075B6N4 114 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 IGKV2D-26A0A0A0MRZ7 120 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 IGKV3D-20A0A0C4DH25 116 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 A0A0J9YX75 114 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 TEX48A0A1B0GUV7 120 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 GAS8-AS1O95177 125 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 IGKCP01834 107 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 LEPP41159 167 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 SNRPD3P62318 126 aaKnown RBP2.41□□□□□ -2.02
CDH19-204ENST00000579658 AMTNQ6UX39 209 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 Q6ZQT7 251 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 SLC50A1Q9BRV3 221 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 XCL2Q9UBD3 114 aa2.41□□□□□ -2.02
CDH19-204ENST00000579658 PKD1P98161 4303 aa2.4□□□□□ -2.02
CDH19-204ENST00000579658 TRAV12-2A0A075B6T6 113 aa2.4□□□□□ -2.02
CDH19-204ENST00000579658 KRTAP23-1A1A580 65 aa2.4□□□□□ -2.02
CDH19-204ENST00000579658 E9PLD3 99 aa2.4□□□□□ -2.02
CDH19-204ENST00000579658 DPM2O94777 84 aa2.4□□□□□ -2.02
CDH19-204ENST00000579658 PRSS1P07477 247 aa2.4□□□□□ -2.02
CDH19-204ENST00000579658 FABP2P12104 132 aa2.4□□□□□ -2.02
CDH19-204ENST00000579658 MIFP14174 115 aa2.4□□□□□ -2.02
CDH19-204ENST00000579658 NMUP48645 174 aa2.4□□□□□ -2.02
CDH19-204ENST00000579658 FXYD2P54710 66 aa2.4□□□□□ -2.02
CDH19-204ENST00000579658 SPINK13Q1W4C9 94 aa2.4□□□□□ -2.02
CDH19-204ENST00000579658 PIK3CD-AS1Q5SR53 167 aa2.4□□□□□ -2.02
CDH19-204ENST00000579658 Q5VSD8 79 aa2.4□□□□□ -2.02
CDH19-204ENST00000579658 C9orf47Q6ZRZ4 202 aa2.4□□□□□ -2.02
CDH19-204ENST00000579658 CEND1Q8N111 149 aa2.4□□□□□ -2.02
CDH19-204ENST00000579658 NRACQ8N912 160 aa2.4□□□□□ -2.02
CDH19-204ENST00000579658 CSNK1G2-AS1Q8NCQ2 148 aa2.4□□□□□ -2.02
CDH19-204ENST00000579658 Q8TAT8 98 aa2.4□□□□□ -2.02
CDH19-204ENST00000579658 AGPAT4-IT1Q9H0P7 198 aa2.4□□□□□ -2.02
CDH19-204ENST00000579658 LENEPQ9Y5L5 61 aa2.4□□□□□ -2.02
CDH19-204ENST00000579658 SPCS1Q9Y6A9 102 aa2.4□□□□□ -2.02
CDH19-204ENST00000579658 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.4□□□□□ -2.02
CDH19-204ENST00000579658 IGHV3OR16-12A0A075B7B8 117 aa2.4□□□□□ -2.03
CDH19-204ENST00000579658 A0A087WX48 190 aa2.4□□□□□ -2.03
CDH19-204ENST00000579658 TRAV12-1A0A0B4J245 112 aa2.4□□□□□ -2.03
CDH19-204ENST00000579658 F8W1H4 67 aa2.4□□□□□ -2.03
CDH19-204ENST00000579658 K7EMI3 77 aa2.4□□□□□ -2.03
CDH19-204ENST00000579658 LAGE3Q14657 143 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms