RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 SMIM2Q9BVW6 85 aa9.46□□□□□ -0.9
MKS1-207ENST00000578789 DNAH8Q96JB1 4490 aa9.46□□□□□ -0.9
MKS1-207ENST00000578789 XGP55808 180 aa9.45□□□□□ -0.9
MKS1-207ENST00000578789 ORMDL3Q8N138 153 aa9.45□□□□□ -0.9
MKS1-207ENST00000578789 TMEM101Q96IK0 257 aa9.45□□□□□ -0.9
MKS1-207ENST00000578789 TCAPO15273 167 aa9.44□□□□□ -0.9
MKS1-207ENST00000578789 OR5A1Q8NGJ0 315 aa9.44□□□□□ -0.9
MKS1-207ENST00000578789 CARHSP1Q9Y2V2 147 aaKnown RBP9.44□□□□□ -0.9
MKS1-207ENST00000578789 TRAV9-1A0A075B6T8 112 aa9.43□□□□□ -0.9
MKS1-207ENST00000578789 TMEM136Q6ZRR5 245 aa9.43□□□□□ -0.9
MKS1-207ENST00000578789 Q6ZSA8 131 aa9.43□□□□□ -0.9
MKS1-207ENST00000578789 Q8N1X5 172 aa9.43□□□□□ -0.9
MKS1-207ENST00000578789 PRELID3AQ96N28 172 aa9.43□□□□□ -0.9
MKS1-207ENST00000578789 CDC42SE2Q9NRR3 84 aa9.43□□□□□ -0.9
MKS1-207ENST00000578789 LAMTOR2Q9Y2Q5 125 aa9.43□□□□□ -0.9
MKS1-207ENST00000578789 CSDC2Q9Y534 153 aaKnown RBP9.43□□□□□ -0.9
MKS1-207ENST00000578789 IGKV3OR2-268A0A0C4DH90 116 aa9.42□□□□□ -0.9
MKS1-207ENST00000578789 PRSS1P07477 247 aa9.42□□□□□ -0.9
MKS1-207ENST00000578789 SMAGPQ0VAQ4 97 aa9.42□□□□□ -0.9
MKS1-207ENST00000578789 CLRN3Q8NCR9 226 aa9.42□□□□□ -0.9
MKS1-207ENST00000578789 TIMM21Q9BVV7 248 aa9.42□□□□□ -0.9
MKS1-207ENST00000578789 UBE2D4Q9Y2X8 147 aa9.42□□□□□ -0.9
MKS1-207ENST00000578789 PRSS47A8MTI9 375 aa9.41□□□□□ -0.9
MKS1-207ENST00000578789 CHCHD10Q8WYQ3 142 aaPredicted RBP9.41□□□□□ -0.9
MKS1-207ENST00000578789 TMEM18Q96B42 140 aa9.41□□□□□ -0.9
MKS1-207ENST00000578789 PCLOQ9Y6V0 5065 aa9.4□□□□□ -0.9
MKS1-207ENST00000578789 ABCA13Q86UQ4 5058 aa9.4□□□□□ -0.9
MKS1-207ENST00000578789 LINC00959A0A1B0GUT2 108 aa9.4□□□□□ -0.9
MKS1-207ENST00000578789 GAGE12HA6NDE8 117 aa9.4□□□□□ -0.9
MKS1-207ENST00000578789 RHEBQ15382 184 aa9.4□□□□□ -0.9
MKS1-207ENST00000578789 ZNF664Q8N3J9 261 aa9.4□□□□□ -0.9
MKS1-207ENST00000578789 FAM30AQ9NZY2 134 aa9.4□□□□□ -0.9
MKS1-207ENST00000578789 DGAT2L7PQ6IED9 249 aa9.39□□□□□ -0.91
MKS1-207ENST00000578789 KRTAP4-5Q9BYR2 181 aa9.39□□□□□ -0.91
MKS1-207ENST00000578789 S100PP25815 95 aa9.38□□□□□ -0.91
MKS1-207ENST00000578789 FOXI1Q12951 378 aa9.38□□□□□ -0.91
MKS1-207ENST00000578789 LINC01620Q4KN68 170 aa9.38□□□□□ -0.91
MKS1-207ENST00000578789 C15orf56Q8N910 161 aa9.38□□□□□ -0.91
MKS1-207ENST00000578789 MAP1LC3AQ9H492 121 aa9.38□□□□□ -0.91
MKS1-207ENST00000578789 CCL25O15444 150 aa9.37□□□□□ -0.91
MKS1-207ENST00000578789 CNBPP62633 177 aaKnown RBP9.37□□□□□ -0.91
MKS1-207ENST00000578789 RPL39P62891 51 aaKnown RBP9.37□□□□□ -0.91
MKS1-207ENST00000578789 LCE2CQ5TA81 110 aa9.37□□□□□ -0.91
MKS1-207ENST00000578789 CFAP161Q6P656 301 aa9.37□□□□□ -0.91
MKS1-207ENST00000578789 Q6ZUT4 128 aa9.37□□□□□ -0.91
MKS1-207ENST00000578789 SPANXA1Q9NS26 97 aa9.37□□□□□ -0.91
MKS1-207ENST00000578789 hDV102S1A0JD36 115 aa9.36□□□□□ -0.91
MKS1-207ENST00000578789 XCL1P47992 114 aa9.36□□□□□ -0.91
MKS1-207ENST00000578789 SS18Q15532 418 aa9.36□□□□□ -0.91
MKS1-207ENST00000578789 C9orf163Q8N9P6 203 aa9.36□□□□□ -0.91
MKS1-207ENST00000578789 RAB5AP20339 215 aa9.35□□□□□ -0.91
MKS1-207ENST00000578789 HAMPP81172 84 aa9.35□□□□□ -0.91
MKS1-207ENST00000578789 MRPS36P82909 103 aaKnown RBP9.35□□□□□ -0.91
MKS1-207ENST00000578789 CD164L2Q6UWJ8 174 aa9.35□□□□□ -0.91
MKS1-207ENST00000578789 Q8N8P6 123 aa9.35□□□□□ -0.91
MKS1-207ENST00000578789 FAM104AQ969W3 186 aa9.35□□□□□ -0.91
MKS1-207ENST00000578789 RPS10P5Q9NQ39 176 aa9.35□□□□□ -0.91
MKS1-207ENST00000578789 GVQW2A0A096LPI5 108 aaPredicted RBP9.34□□□□□ -0.91
MKS1-207ENST00000578789 LOC389332A0A1B0GUA5 103 aa9.34□□□□□ -0.91
MKS1-207ENST00000578789 COX19Q49B96 90 aa9.34□□□□□ -0.91
MKS1-207ENST00000578789 RNASE13Q5GAN3 156 aaKnown RBP9.34□□□□□ -0.91
MKS1-207ENST00000578789 GNB1LQ9BYB4 327 aa9.34□□□□□ -0.91
MKS1-207ENST00000578789 AP5S1Q9NUS5 200 aa9.34□□□□□ -0.91
MKS1-207ENST00000578789 C1orf196B1AJZ1 125 aa9.33□□□□□ -0.92
MKS1-207ENST00000578789 K7EMI3 77 aa9.33□□□□□ -0.92
MKS1-207ENST00000578789 SLPIP03973 132 aa9.33□□□□□ -0.92
MKS1-207ENST00000578789 FAT1Q14517 4588 aa9.33□□□□□ -0.92
MKS1-207ENST00000578789 IGHV1-58A0A0C4DH39 117 aa9.32□□□□□ -0.92
MKS1-207ENST00000578789 EPM2AB3EWF7 344 aa9.32□□□□□ -0.92
MKS1-207ENST00000578789 APOC3P02656 99 aa9.32□□□□□ -0.92
MKS1-207ENST00000578789 NDUFA5Q16718 116 aa9.32□□□□□ -0.92
MKS1-207ENST00000578789 KIAA1644Q3SXP7 199 aa9.32□□□□□ -0.92
MKS1-207ENST00000578789 SVBPQ8N300 66 aa9.32□□□□□ -0.92
MKS1-207ENST00000578789 NXT2Q9NPJ8 142 aaKnown RBP9.32□□□□□ -0.92
MKS1-207ENST00000578789 PYGO1Q9Y3Y4 419 aa9.32□□□□□ -0.92
MKS1-207ENST00000578789 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.31□□□□□ -0.92
MKS1-207ENST00000578789 TRAV13-1A0A0B4J241 112 aa9.31□□□□□ -0.92
MKS1-207ENST00000578789 SNAPINO95295 136 aa9.31□□□□□ -0.92
MKS1-207ENST00000578789 MT-ND6P03923 174 aa9.31□□□□□ -0.92
MKS1-207ENST00000578789 IFI27P40305 119 aaPredicted RBP9.31□□□□□ -0.92
MKS1-207ENST00000578789 HIGD2BQ4VC39 106 aa9.31□□□□□ -0.92
MKS1-207ENST00000578789 ORMDL2Q53FV1 153 aa9.31□□□□□ -0.92
MKS1-207ENST00000578789 Q5VSD8 79 aa9.31□□□□□ -0.92
MKS1-207ENST00000578789 SCXQ7RTU7 201 aa9.31□□□□□ -0.92
MKS1-207ENST00000578789 CHAC1Q9BUX1 264 aa9.31□□□□□ -0.92
MKS1-207ENST00000578789 SMR3BP02814 79 aaPredicted RBP9.3□□□□□ -0.92
MKS1-207ENST00000578789 SDIM1Q6ZPB5 146 aa9.3□□□□□ -0.92
MKS1-207ENST00000578789 OPRPNQ99935 248 aaPredicted RBP9.3□□□□□ -0.92
MKS1-207ENST00000578789 VPS13BQ7Z7G8 4022 aa9.29□□□□□ -0.92
MKS1-207ENST00000578789 IGLV4-3A0A075B6K6 122 aa9.29□□□□□ -0.92
MKS1-207ENST00000578789 IGHV3-64A0A075B6Q5 118 aa9.29□□□□□ -0.92
MKS1-207ENST00000578789 C2orf66Q6UXQ4 117 aa9.29□□□□□ -0.92
MKS1-207ENST00000578789 ALKBH7Q9BT30 221 aaPredicted RBP9.29□□□□□ -0.92
MKS1-207ENST00000578789 CYSLTR1Q9Y271 337 aa9.29□□□□□ -0.92
MKS1-207ENST00000578789 IFITM10A6NMD0 228 aa9.28□□□□□ -0.92
MKS1-207ENST00000578789 COX7A2LO14548 114 aa9.28□□□□□ -0.92
MKS1-207ENST00000578789 NPSP0C0P6 89 aa9.28□□□□□ -0.92
MKS1-207ENST00000578789 CIRBPQ14011 172 aaKnown RBP9.28□□□□□ -0.92
MKS1-207ENST00000578789 CIRBP-AS1Q8TBR5 109 aa9.28□□□□□ -0.92
MKS1-207ENST00000578789 MRPL18Q9H0U6 180 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms