RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	2.71	□□□□□ -1.98
PPP4R1-209	ENST00000578329	CCL25	O15444	150 aa		2.71	□□□□□ -1.98
PPP4R1-209	ENST00000578329	PDE6D	O43924	150 aa		2.71	□□□□□ -1.98
PPP4R1-209	ENST00000578329	NDUFS6	O75380	124 aa	Known RBP	2.71	□□□□□ -1.98
PPP4R1-209	ENST00000578329	NCR2	O95944	276 aa		2.71	□□□□□ -1.98
PPP4R1-209	ENST00000578329	KRTAP1-4	P0C5Y4	121 aa		2.71	□□□□□ -1.98
PPP4R1-209	ENST00000578329	TRGC1	P0CF51	173 aa		2.71	□□□□□ -1.98
PPP4R1-209	ENST00000578329	SMIM17	P0DL12	118 aa		2.71	□□□□□ -1.98
PPP4R1-209	ENST00000578329	XCL1	P47992	114 aa		2.71	□□□□□ -1.98
PPP4R1-209	ENST00000578329	PKIA	P61925	76 aa		2.71	□□□□□ -1.98
PPP4R1-209	ENST00000578329	SRSF3	P84103	164 aa	Known RBP	2.71	□□□□□ -1.98
PPP4R1-209	ENST00000578329	COTL1	Q14019	142 aa		2.71	□□□□□ -1.98
PPP4R1-209	ENST00000578329	TWIST1	Q15672	202 aa		2.71	□□□□□ -1.98
PPP4R1-209	ENST00000578329	MAJIN	Q3KP22	176 aa		2.71	□□□□□ -1.98
PPP4R1-209	ENST00000578329	RNASE13	Q5GAN3	156 aa	Known RBP	2.71	□□□□□ -1.98
PPP4R1-209	ENST00000578329	C10orf25	Q5T742	122 aa		2.71	□□□□□ -1.98
PPP4R1-209	ENST00000578329	LINC01551	Q86U37	167 aa		2.71	□□□□□ -1.98
PPP4R1-209	ENST00000578329	AMN1	Q8IY45	258 aa		2.71	□□□□□ -1.98
PPP4R1-209	ENST00000578329	OR5A1	Q8NGJ0	315 aa		2.71	□□□□□ -1.98
PPP4R1-209	ENST00000578329		V9GYV3	84 aa		2.71	□□□□□ -1.98
PPP4R1-209	ENST00000578329	IGLV4-69	A0A075B6H9	119 aa		2.7	□□□□□ -1.98
PPP4R1-209	ENST00000578329		A0A1B0GVG6	124 aa		2.7	□□□□□ -1.98
PPP4R1-209	ENST00000578329	FAM168B	A1KXE4	195 aa		2.7	□□□□□ -1.98
PPP4R1-209	ENST00000578329	TMEM250	H0YL14	139 aa		2.7	□□□□□ -1.98
PPP4R1-209	ENST00000578329		H7C423	109 aa		2.7	□□□□□ -1.98
PPP4R1-209	ENST00000578329	SRP19	P09132	144 aa	Known RBP	2.7	□□□□□ -1.98
PPP4R1-209	ENST00000578329	PTTG1IP	P53801	180 aa		2.7	□□□□□ -1.98
PPP4R1-209	ENST00000578329	KCNIP4	Q6PIL6	250 aa		2.7	□□□□□ -1.98
PPP4R1-209	ENST00000578329	ALKAL2	Q6UX46	152 aa		2.7	□□□□□ -1.98
PPP4R1-209	ENST00000578329		Q6ZUT4	128 aa		2.7	□□□□□ -1.98
PPP4R1-209	ENST00000578329	SLC51B	Q86UW2	128 aa		2.7	□□□□□ -1.98
PPP4R1-209	ENST00000578329	NUP35	Q8NFH5	326 aa		2.7	□□□□□ -1.98
PPP4R1-209	ENST00000578329	OPRPN	Q99935	248 aa	Predicted RBP	2.7	□□□□□ -1.98
PPP4R1-209	ENST00000578329	UBE2D4	Q9Y2X8	147 aa		2.7	□□□□□ -1.98
PPP4R1-209	ENST00000578329	IGHV3OR16-9	A0A0B4J2B5	98 aa		2.69	□□□□□ -1.98
PPP4R1-209	ENST00000578329	HIGD1C	A8MV81	97 aa		2.69	□□□□□ -1.98
PPP4R1-209	ENST00000578329	TEX46	H3BTG2	121 aa		2.69	□□□□□ -1.98
PPP4R1-209	ENST00000578329		I3L3M4	83 aa		2.69	□□□□□ -1.98
PPP4R1-209	ENST00000578329	APCS	P02743	223 aa		2.69	□□□□□ -1.98
PPP4R1-209	ENST00000578329	SYCN	Q0VAF6	134 aa		2.69	□□□□□ -1.98
PPP4R1-209	ENST00000578329	KIAA0087	Q14695	138 aa		2.69	□□□□□ -1.98
PPP4R1-209	ENST00000578329	MRPL51	Q4U2R6	128 aa	Known RBP	2.69	□□□□□ -1.98
PPP4R1-209	ENST00000578329	CT83	Q5H943	113 aa		2.69	□□□□□ -1.98
PPP4R1-209	ENST00000578329	RNASEK	Q6P5S7	137 aa	Known RBP	2.69	□□□□□ -1.98
PPP4R1-209	ENST00000578329	CD164L2	Q6UWJ8	174 aa		2.69	□□□□□ -1.98
PPP4R1-209	ENST00000578329	SPINK6	Q6UWN8	80 aa		2.69	□□□□□ -1.98
PPP4R1-209	ENST00000578329	PHF5A	Q7RTV0	110 aa	Known RBP	2.69	□□□□□ -1.98
PPP4R1-209	ENST00000578329	ZNF664	Q8N3J9	261 aa		2.69	□□□□□ -1.98
PPP4R1-209	ENST00000578329	TSKU	Q8WUA8	353 aa		2.69	□□□□□ -1.98
PPP4R1-209	ENST00000578329	TMEM191A	Q9H0A3	160 aa		2.69	□□□□□ -1.98
PPP4R1-209	ENST00000578329	PSORS1C2	Q9UIG4	136 aa		2.69	□□□□□ -1.98
PPP4R1-209	ENST00000578329	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	2.68	□□□□□ -1.98
PPP4R1-209	ENST00000578329	IGHV1-58	A0A0C4DH39	117 aa		2.68	□□□□□ -1.98
PPP4R1-209	ENST00000578329		A0A1B0GXF2	115 aa		2.68	□□□□□ -1.98
PPP4R1-209	ENST00000578329	GATC	O43716	136 aa	Known RBP	2.68	□□□□□ -1.98
PPP4R1-209	ENST00000578329	ZNF25	P17030	456 aa	Predicted RBP	2.68	□□□□□ -1.98
PPP4R1-209	ENST00000578329	RPL23	P62829	140 aa	Known RBP	2.68	□□□□□ -1.98
PPP4R1-209	ENST00000578329	RPL39	P62891	51 aa	Known RBP	2.68	□□□□□ -1.98
PPP4R1-209	ENST00000578329	EIF5A	P63241	154 aa	Known RBP	2.68	□□□□□ -1.98
PPP4R1-209	ENST00000578329	C9orf116	Q5BN46	136 aa	Predicted RBP	2.68	□□□□□ -1.98
PPP4R1-209	ENST00000578329	LCE2C	Q5TA81	110 aa		2.68	□□□□□ -1.98
PPP4R1-209	ENST00000578329	C5orf38	Q86SI9	138 aa		2.68	□□□□□ -1.98
PPP4R1-209	ENST00000578329	PRR26	Q8N8Z3	221 aa		2.68	□□□□□ -1.98
PPP4R1-209	ENST00000578329	ISOC2	Q96AB3	205 aa		2.68	□□□□□ -1.98
PPP4R1-209	ENST00000578329	CARD19	Q96LW7	228 aa		2.68	□□□□□ -1.98
PPP4R1-209	ENST00000578329	OSTC	Q9NRP0	149 aa		2.68	□□□□□ -1.98
PPP4R1-209	ENST00000578329	AP5S1	Q9NUS5	200 aa		2.68	□□□□□ -1.98
PPP4R1-209	ENST00000578329	CSDC2	Q9Y534	153 aa	Known RBP	2.68	□□□□□ -1.98
PPP4R1-209	ENST00000578329	TRBV24-1	A0A075B6N3	115 aa		2.67	□□□□□ -1.98
PPP4R1-209	ENST00000578329		A0A1B0GUT8	65 aa		2.67	□□□□□ -1.98
PPP4R1-209	ENST00000578329	SMIM27	A0A1W2PRY6	76 aa		2.67	□□□□□ -1.98
PPP4R1-209	ENST00000578329	XKRY2	A2RUG3	117 aa		2.67	□□□□□ -1.98
PPP4R1-209	ENST00000578329		A8MWL6	223 aa		2.67	□□□□□ -1.98
PPP4R1-209	ENST00000578329	UBE2L6	O14933	153 aa		2.67	□□□□□ -1.98
PPP4R1-209	ENST00000578329	NPY	P01303	97 aa		2.67	□□□□□ -1.98
PPP4R1-209	ENST00000578329	PMCH	P20382	165 aa		2.67	□□□□□ -1.98
PPP4R1-209	ENST00000578329	CAMP	P49913	170 aa		2.67	□□□□□ -1.98
PPP4R1-209	ENST00000578329	ZC2HC1B	Q5TFG8	222 aa		2.67	□□□□□ -1.98
PPP4R1-209	ENST00000578329	FAM104B	Q5XKR9	115 aa		2.67	□□□□□ -1.98
PPP4R1-209	ENST00000578329	AMMECR1L	Q6DCA0	310 aa		2.67	□□□□□ -1.98
PPP4R1-209	ENST00000578329	CFAP161	Q6P656	301 aa		2.67	□□□□□ -1.98
PPP4R1-209	ENST00000578329	UNQ6190/PRO20217	Q6UXQ8	127 aa		2.67	□□□□□ -1.98
PPP4R1-209	ENST00000578329		Q6ZRP5	223 aa		2.67	□□□□□ -1.98
PPP4R1-209	ENST00000578329	LINC00173	Q6ZV60	143 aa		2.67	□□□□□ -1.98
PPP4R1-209	ENST00000578329	FAM210A	Q96ND0	272 aa		2.67	□□□□□ -1.98
PPP4R1-209	ENST00000578329	SMIM7	Q9BQ49	75 aa		2.67	□□□□□ -1.98
PPP4R1-209	ENST00000578329	TIMM21	Q9BVV7	248 aa		2.67	□□□□□ -1.98
PPP4R1-209	ENST00000578329	ST20	Q9HBF5	79 aa		2.67	□□□□□ -1.98
PPP4R1-209	ENST00000578329	C6orf48	Q9UBA6	75 aa		2.67	□□□□□ -1.98
PPP4R1-209	ENST00000578329	hCG_2014768	A0A024R1R8	64 aa		2.66	□□□□□ -1.98
PPP4R1-209	ENST00000578329	TRAV13-1	A0A0B4J241	112 aa		2.66	□□□□□ -1.98
PPP4R1-209	ENST00000578329	C7orf77	A4D0Y5	90 aa		2.66	□□□□□ -1.98
PPP4R1-209	ENST00000578329	APOM	O95445	188 aa		2.66	□□□□□ -1.98
PPP4R1-209	ENST00000578329	SUMO2	P61956	95 aa	Known RBP	2.66	□□□□□ -1.98
PPP4R1-209	ENST00000578329	RPL32	P62910	135 aa	Known RBP	2.66	□□□□□ -1.98
PPP4R1-209	ENST00000578329	GAGE2B	Q13066	116 aa		2.66	□□□□□ -1.98
PPP4R1-209	ENST00000578329	SS18	Q15532	418 aa		2.66	□□□□□ -1.98
PPP4R1-209	ENST00000578329	FAM74A3	Q4VXF1	159 aa		2.66	□□□□□ -1.98
PPP4R1-209	ENST00000578329	C9orf129	Q5T035	196 aa	Known RBP	2.66	□□□□□ -1.98
PPP4R1-209	ENST00000578329	EIF5AL1	Q6IS14	154 aa	Known RBP	2.66	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms