RNA–Protein interactions for RNA: ENST00000578294.1

NUP85-207, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-207ENST00000578294 KRTAP4-5Q9BYR2 181 aa8.47□□□□□ -1.05
NUP85-207ENST00000578294 FAM229AH3BQW9 127 aa8.46□□□□□ -1.06
NUP85-207ENST00000578294 TNFRSF6BO95407 300 aa8.46□□□□□ -1.06
NUP85-207ENST00000578294 PRSS1P07477 247 aa8.46□□□□□ -1.06
NUP85-207ENST00000578294 AP5S1Q9NUS5 200 aa8.46□□□□□ -1.06
NUP85-207ENST00000578294 CSDC2Q9Y534 153 aaKnown RBP8.46□□□□□ -1.06
NUP85-207ENST00000578294 IGKV3OR2-268A0A0C4DH90 116 aa8.45□□□□□ -1.06
NUP85-207ENST00000578294 GAGE12HA6NDE8 117 aa8.45□□□□□ -1.06
NUP85-207ENST00000578294 D6R8Y8 96 aa8.45□□□□□ -1.06
NUP85-207ENST00000578294 ORMDL3Q8N138 153 aa8.45□□□□□ -1.06
NUP85-207ENST00000578294 CHCHD10Q8WYQ3 142 aaPredicted RBP8.45□□□□□ -1.06
NUP85-207ENST00000578294 KRTAP17-1Q9BYP8 105 aa8.45□□□□□ -1.06
NUP85-207ENST00000578294 FAM30AQ9NZY2 134 aa8.45□□□□□ -1.06
NUP85-207ENST00000578294 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.44□□□□□ -1.06
NUP85-207ENST00000578294 hDV102S1A0JD36 115 aa8.44□□□□□ -1.06
NUP85-207ENST00000578294 CCL25O15444 150 aa8.44□□□□□ -1.06
NUP85-207ENST00000578294 CNBPP62633 177 aaKnown RBP8.44□□□□□ -1.06
NUP85-207ENST00000578294 Q5VSD8 79 aa8.44□□□□□ -1.06
NUP85-207ENST00000578294 ZNF664Q8N3J9 261 aa8.44□□□□□ -1.06
NUP85-207ENST00000578294 C9orf163Q8N9P6 203 aa8.44□□□□□ -1.06
NUP85-207ENST00000578294 IMMP2LQ96T52 175 aa8.44□□□□□ -1.06
NUP85-207ENST00000578294 SMIM2Q9BVW6 85 aa8.44□□□□□ -1.06
NUP85-207ENST00000578294 CDC42SE2Q9NRR3 84 aa8.44□□□□□ -1.06
NUP85-207ENST00000578294 LAMTOR2Q9Y2Q5 125 aa8.44□□□□□ -1.06
NUP85-207ENST00000578294 SS18Q15532 418 aa8.43□□□□□ -1.06
NUP85-207ENST00000578294 C10orf91Q5T1B1 145 aa8.43□□□□□ -1.06
NUP85-207ENST00000578294 TMEM136Q6ZRR5 245 aa8.43□□□□□ -1.06
NUP85-207ENST00000578294 CHAC1Q9BUX1 264 aa8.43□□□□□ -1.06
NUP85-207ENST00000578294 TIMM21Q9BVV7 248 aa8.43□□□□□ -1.06
NUP85-207ENST00000578294 SEC11CQ9BY50 192 aa8.43□□□□□ -1.06
NUP85-207ENST00000578294 CTDSP1Q9GZU7 261 aa8.43□□□□□ -1.06
NUP85-207ENST00000578294 LINC00959A0A1B0GUT2 108 aa8.42□□□□□ -1.06
NUP85-207ENST00000578294 SMR3BP02814 79 aaPredicted RBP8.42□□□□□ -1.06
NUP85-207ENST00000578294 LINC01620Q4KN68 170 aa8.42□□□□□ -1.06
NUP85-207ENST00000578294 CARHSP1Q9Y2V2 147 aaKnown RBP8.42□□□□□ -1.06
NUP85-207ENST00000578294 UBE2D4Q9Y2X8 147 aa8.42□□□□□ -1.06
NUP85-207ENST00000578294 NPYP01303 97 aa8.41□□□□□ -1.06
NUP85-207ENST00000578294 PRELID3AQ96N28 172 aa8.41□□□□□ -1.06
NUP85-207ENST00000578294 IGHV3-64A0A075B6Q5 118 aa8.4□□□□□ -1.06
NUP85-207ENST00000578294 TRAV9-1A0A075B6T8 112 aa8.4□□□□□ -1.06
NUP85-207ENST00000578294 C1orf196B1AJZ1 125 aa8.4□□□□□ -1.06
NUP85-207ENST00000578294 RAB5AP20339 215 aa8.4□□□□□ -1.06
NUP85-207ENST00000578294 HAMPP81172 84 aa8.4□□□□□ -1.06
NUP85-207ENST00000578294 FOXI1Q12951 378 aa8.4□□□□□ -1.06
NUP85-207ENST00000578294 CD164L2Q6UWJ8 174 aa8.4□□□□□ -1.06
NUP85-207ENST00000578294 C15orf56Q8N910 161 aa8.4□□□□□ -1.06
NUP85-207ENST00000578294 GVQW2A0A096LPI5 108 aaPredicted RBP8.39□□□□□ -1.07
NUP85-207ENST00000578294 IGHV1-58A0A0C4DH39 117 aa8.39□□□□□ -1.07
NUP85-207ENST00000578294 PRSS47A8MTI9 375 aa8.39□□□□□ -1.07
NUP85-207ENST00000578294 PLA2G1BP04054 148 aaKnown RBP8.39□□□□□ -1.07
NUP85-207ENST00000578294 XCL1P47992 114 aa8.39□□□□□ -1.07
NUP85-207ENST00000578294 SCXQ7RTU7 201 aa8.39□□□□□ -1.07
NUP85-207ENST00000578294 MAP1LC3AQ9H492 121 aa8.39□□□□□ -1.07
NUP85-207ENST00000578294 SPANXA1Q9NS26 97 aa8.39□□□□□ -1.07
NUP85-207ENST00000578294 INAFM2P0DMQ5 153 aa8.38□□□□□ -1.07
NUP85-207ENST00000578294 S100PP25815 95 aa8.38□□□□□ -1.07
NUP85-207ENST00000578294 PKIGQ9Y2B9 76 aa8.38□□□□□ -1.07
NUP85-207ENST00000578294 VPS13BQ7Z7G8 4022 aa8.38□□□□□ -1.07
NUP85-207ENST00000578294 FAT1Q14517 4588 aa8.37□□□□□ -1.07
NUP85-207ENST00000578294 K7EMI3 77 aa8.37□□□□□ -1.07
NUP85-207ENST00000578294 MRPS36P82909 103 aaKnown RBP8.37□□□□□ -1.07
NUP85-207ENST00000578294 SDIM1Q6ZPB5 146 aa8.37□□□□□ -1.07
NUP85-207ENST00000578294 SLC7A5P1Q8MH63 180 aa8.37□□□□□ -1.07
NUP85-207ENST00000578294 LINC00528Q8N1L1 170 aa8.37□□□□□ -1.07
NUP85-207ENST00000578294 CIRBP-AS1Q8TBR5 109 aa8.37□□□□□ -1.07
NUP85-207ENST00000578294 COX7A2LO14548 114 aa8.35□□□□□ -1.07
NUP85-207ENST00000578294 APOC3P02656 99 aa8.35□□□□□ -1.07
NUP85-207ENST00000578294 SLPIP03973 132 aa8.35□□□□□ -1.07
NUP85-207ENST00000578294 MALP21145 153 aa8.35□□□□□ -1.07
NUP85-207ENST00000578294 IFI27P40305 119 aaPredicted RBP8.35□□□□□ -1.07
NUP85-207ENST00000578294 RPL39P62891 51 aaKnown RBP8.35□□□□□ -1.07
NUP85-207ENST00000578294 RHEBQ15382 184 aa8.35□□□□□ -1.07
NUP85-207ENST00000578294 COX19Q49B96 90 aa8.35□□□□□ -1.07
NUP85-207ENST00000578294 HIGD2BQ4VC39 106 aa8.35□□□□□ -1.07
NUP85-207ENST00000578294 Q6ZUT4 128 aa8.35□□□□□ -1.07
NUP85-207ENST00000578294 Q8N8P6 123 aa8.35□□□□□ -1.07
NUP85-207ENST00000578294 PYGO1Q9Y3Y4 419 aa8.35□□□□□ -1.07
NUP85-207ENST00000578294 TRAV13-1A0A0B4J241 112 aa8.34□□□□□ -1.07
NUP85-207ENST00000578294 ZNF561-AS1K7EIQ3 104 aa8.34□□□□□ -1.07
NUP85-207ENST00000578294 APOMO95445 188 aa8.34□□□□□ -1.07
NUP85-207ENST00000578294 G0S2P27469 103 aa8.34□□□□□ -1.07
NUP85-207ENST00000578294 ORMDL2Q53FV1 153 aa8.34□□□□□ -1.07
NUP85-207ENST00000578294 NXT2Q9NPJ8 142 aaKnown RBP8.34□□□□□ -1.07
NUP85-207ENST00000578294 LOC389332A0A1B0GUA5 103 aa8.33□□□□□ -1.08
NUP85-207ENST00000578294 CIRBPQ14011 172 aaKnown RBP8.33□□□□□ -1.08
NUP85-207ENST00000578294 RNASE13Q5GAN3 156 aaKnown RBP8.33□□□□□ -1.08
NUP85-207ENST00000578294 GNB1LQ9BYB4 327 aa8.33□□□□□ -1.08
NUP85-207ENST00000578294 RPS10P5Q9NQ39 176 aa8.33□□□□□ -1.08
NUP85-207ENST00000578294 NPSP0C0P6 89 aa8.32□□□□□ -1.08
NUP85-207ENST00000578294 CYSLTR1Q9Y271 337 aa8.32□□□□□ -1.08
NUP85-207ENST00000578294 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.32□□□□□ -1.08
NUP85-207ENST00000578294 IFITM10A6NMD0 228 aa8.31□□□□□ -1.08
NUP85-207ENST00000578294 MT-ND6P03923 174 aa8.31□□□□□ -1.08
NUP85-207ENST00000578294 DPH3Q96FX2 82 aa8.31□□□□□ -1.08
NUP85-207ENST00000578294 TMEM141Q96I45 108 aa8.31□□□□□ -1.08
NUP85-207ENST00000578294 LINC00474Q9P2X8 69 aa8.31□□□□□ -1.08
NUP85-207ENST00000578294 COX6A2Q02221 97 aa8.3□□□□□ -1.08
NUP85-207ENST00000578294 SYCNQ0VAF6 134 aa8.3□□□□□ -1.08
NUP85-207ENST00000578294 NDUFA5Q16718 116 aa8.3□□□□□ -1.08
NUP85-207ENST00000578294 C2orf66Q6UXQ4 117 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms