RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 BAALCQ8WXS3 180 aa9.89□□□□□ -0.83
SREBF1-217ENST00000577897 C14orf144Q96I85 54 aa9.89□□□□□ -0.83
SREBF1-217ENST00000577897 SPANXA1Q9NS26 97 aa9.89□□□□□ -0.83
SREBF1-217ENST00000577897 DKK2Q9UBU2 259 aa9.89□□□□□ -0.83
SREBF1-217ENST00000577897 PYGO1Q9Y3Y4 419 aa9.89□□□□□ -0.83
SREBF1-217ENST00000577897 TEX48A0A1B0GUV7 120 aa9.88□□□□□ -0.83
SREBF1-217ENST00000577897 IGIPA6NJ69 53 aa9.88□□□□□ -0.83
SREBF1-217ENST00000577897 COX8AP10176 69 aa9.88□□□□□ -0.83
SREBF1-217ENST00000577897 ZNRF2Q8NHG8 242 aa9.88□□□□□ -0.83
SREBF1-217ENST00000577897 ZNF479Q96JC4 524 aa9.88□□□□□ -0.83
SREBF1-217ENST00000577897 PLAC8L1A1L4L8 177 aa9.87□□□□□ -0.83
SREBF1-217ENST00000577897 DLEU1O43261 78 aa9.87□□□□□ -0.83
SREBF1-217ENST00000577897 MAJINQ3KP22 176 aa9.87□□□□□ -0.83
SREBF1-217ENST00000577897 VCX2Q9H322 139 aa9.87□□□□□ -0.83
SREBF1-217ENST00000577897 MRPL35Q9NZE8 188 aaKnown RBP9.87□□□□□ -0.83
SREBF1-217ENST00000577897 DEFB4AO15263 64 aa9.86□□□□□ -0.83
SREBF1-217ENST00000577897 SIVA1O15304 175 aa9.86□□□□□ -0.83
SREBF1-217ENST00000577897 EMP1P54849 157 aa9.86□□□□□ -0.83
SREBF1-217ENST00000577897 DGAT2L7PQ6IED9 249 aa9.86□□□□□ -0.83
SREBF1-217ENST00000577897 OR11H2Q8NH07 326 aa9.86□□□□□ -0.83
SREBF1-217ENST00000577897 C2orf88Q9BSF0 95 aa9.86□□□□□ -0.83
SREBF1-217ENST00000577897 P0DMU3 169 aa9.85□□□□□ -0.83
SREBF1-217ENST00000577897 FAM231AP0DMU4 169 aa9.85□□□□□ -0.83
SREBF1-217ENST00000577897 FAM231CP0DMU5 169 aa9.85□□□□□ -0.83
SREBF1-217ENST00000577897 ZC2HC1BQ5TFG8 222 aa9.85□□□□□ -0.83
SREBF1-217ENST00000577897 CST9LQ9H4G1 147 aa9.85□□□□□ -0.83
SREBF1-217ENST00000577897 UBR4Q5T4S7 5183 aa9.85□□□□□ -0.83
SREBF1-217ENST00000577897 H7C423 109 aa9.84□□□□□ -0.83
SREBF1-217ENST00000577897 NMUP48645 174 aa9.84□□□□□ -0.83
SREBF1-217ENST00000577897 RPL39P62891 51 aaKnown RBP9.84□□□□□ -0.83
SREBF1-217ENST00000577897 CTAG1AP78358 180 aa9.84□□□□□ -0.83
SREBF1-217ENST00000577897 Q6ZSN1 163 aa9.84□□□□□ -0.83
SREBF1-217ENST00000577897 LINC00612Q8N6U2 182 aa9.84□□□□□ -0.83
SREBF1-217ENST00000577897 SLC25A29Q8N8R3 303 aa9.84□□□□□ -0.83
SREBF1-217ENST00000577897 TIMM21Q9BVV7 248 aa9.84□□□□□ -0.83
SREBF1-217ENST00000577897 GTSF1LQ9H1H1 148 aa9.84□□□□□ -0.83
SREBF1-217ENST00000577897 C11orf68Q9H3H3 251 aaKnown RBP9.84□□□□□ -0.83
SREBF1-217ENST00000577897 X6R8D5 127 aa9.84□□□□□ -0.83
SREBF1-217ENST00000577897 UBE2L6O14933 153 aa9.83□□□□□ -0.84
SREBF1-217ENST00000577897 STPG4Q8N801 248 aa9.83□□□□□ -0.84
SREBF1-217ENST00000577897 HHLA3Q9XRX5 114 aa9.83□□□□□ -0.84
SREBF1-217ENST00000577897 NACAE9PAV3 2078 aa9.83□□□□□ -0.84
SREBF1-217ENST00000577897 SPART-AS1P0CW21 52 aa9.82□□□□□ -0.84
SREBF1-217ENST00000577897 DEFB130BP0DP73 79 aa9.82□□□□□ -0.84
SREBF1-217ENST00000577897 DEFB130AP0DP74 79 aa9.82□□□□□ -0.84
SREBF1-217ENST00000577897 UBE2D3P61077 147 aa9.82□□□□□ -0.84
SREBF1-217ENST00000577897 UBE2D2P62837 147 aa9.82□□□□□ -0.84
SREBF1-217ENST00000577897 BOD1L2Q8IYS8 172 aa9.82□□□□□ -0.84
SREBF1-217ENST00000577897 SRRM2Q9UQ35 2752 aaKnown RBP9.81□□□□□ -0.84
SREBF1-217ENST00000577897 TRBV25-1A0A075B6N4 114 aa9.81□□□□□ -0.84
SREBF1-217ENST00000577897 GAGE12JA6NER3 117 aa9.81□□□□□ -0.84
SREBF1-217ENST00000577897 DAD1P61803 113 aa9.81□□□□□ -0.84
SREBF1-217ENST00000577897 SEC11AP67812 179 aa9.81□□□□□ -0.84
SREBF1-217ENST00000577897 MRPS36P82909 103 aaKnown RBP9.81□□□□□ -0.84
SREBF1-217ENST00000577897 GAGE1Q13065 139 aa9.81□□□□□ -0.84
SREBF1-217ENST00000577897 GAGE4Q13068 117 aa9.81□□□□□ -0.84
SREBF1-217ENST00000577897 GAGE5Q13069 117 aa9.81□□□□□ -0.84
SREBF1-217ENST00000577897 GAGE13Q4V321 117 aa9.81□□□□□ -0.84
SREBF1-217ENST00000577897 ANKRD39Q53RE8 183 aa9.81□□□□□ -0.84
SREBF1-217ENST00000577897 TMEM101Q96IK0 257 aa9.81□□□□□ -0.84
SREBF1-217ENST00000577897 PRO0255Q9UI72 69 aa9.81□□□□□ -0.84
SREBF1-217ENST00000577897 IGLV4-3A0A075B6K6 122 aa9.8□□□□□ -0.84
SREBF1-217ENST00000577897 C16orf90A8MZG2 172 aa9.8□□□□□ -0.84
SREBF1-217ENST00000577897 CDK2AP2O75956 126 aa9.8□□□□□ -0.84
SREBF1-217ENST00000577897 FHL2Q14192 279 aa9.8□□□□□ -0.84
SREBF1-217ENST00000577897 FAM222AQ5U5X8 452 aa9.8□□□□□ -0.84
SREBF1-217ENST00000577897 TMEM243Q9BU79 118 aa9.8□□□□□ -0.84
SREBF1-217ENST00000577897 CHCHD7Q9BUK0 85 aa9.8□□□□□ -0.84
SREBF1-217ENST00000577897 CSDC2Q9Y534 153 aaKnown RBP9.8□□□□□ -0.84
SREBF1-217ENST00000577897 IGHV3-38A0A0C4DH36 116 aa9.79□□□□□ -0.84
SREBF1-217ENST00000577897 C11orf86A6NJI1 115 aa9.79□□□□□ -0.84
SREBF1-217ENST00000577897 COL5A1-AS1Q5SY13 56 aa9.79□□□□□ -0.84
SREBF1-217ENST00000577897 AMMECR1LQ6DCA0 310 aa9.79□□□□□ -0.84
SREBF1-217ENST00000577897 SH2D6Q7Z4S9 175 aa9.79□□□□□ -0.84
SREBF1-217ENST00000577897 NFE4Q86UQ8 179 aa9.79□□□□□ -0.84
SREBF1-217ENST00000577897 Q8N1X5 172 aa9.79□□□□□ -0.84
SREBF1-217ENST00000577897 UBE2D4Q9Y2X8 147 aa9.79□□□□□ -0.84
SREBF1-217ENST00000577897 IGHV4-28A0A0C4DH34 117 aa9.78□□□□□ -0.84
SREBF1-217ENST00000577897 E9PLD3 99 aa9.78□□□□□ -0.84
SREBF1-217ENST00000577897 ATP5G1P05496 136 aa9.78□□□□□ -0.84
SREBF1-217ENST00000577897 ZNF25P17030 456 aaPredicted RBP9.78□□□□□ -0.84
SREBF1-217ENST00000577897 BATFQ16520 125 aa9.78□□□□□ -0.84
SREBF1-217ENST00000577897 TMEM170BQ5T4T1 132 aa9.78□□□□□ -0.84
SREBF1-217ENST00000577897 DEFB104AQ8WTQ1 72 aa9.78□□□□□ -0.84
SREBF1-217ENST00000577897 AMELXQ99217 191 aa9.78□□□□□ -0.84
SREBF1-217ENST00000577897 SNHG12Q9BXW3 62 aa9.78□□□□□ -0.84
SREBF1-217ENST00000577897 HIGD1BQ9P298 99 aa9.78□□□□□ -0.84
SREBF1-217ENST00000577897 Q6ZTC4 211 aa9.77□□□□□ -0.85
SREBF1-217ENST00000577897 OR5A1Q8NGJ0 315 aa9.77□□□□□ -0.85
SREBF1-217ENST00000577897 CHAC1Q9BUX1 264 aa9.77□□□□□ -0.85
SREBF1-217ENST00000577897 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.76□□□□□ -0.85
SREBF1-217ENST00000577897 TRAV10A0A0B4J240 114 aa9.76□□□□□ -0.85
SREBF1-217ENST00000577897 IGKV2-29A2NJV5 120 aaPredicted RBP9.76□□□□□ -0.85
SREBF1-217ENST00000577897 H3BRM9 83 aa9.76□□□□□ -0.85
SREBF1-217ENST00000577897 PAX4O43316 350 aa9.76□□□□□ -0.85
SREBF1-217ENST00000577897 HSD52Q0P140 79 aa9.76□□□□□ -0.85
SREBF1-217ENST00000577897 GEMIN7Q9H840 131 aaKnown RBP9.76□□□□□ -0.85
SREBF1-217ENST00000577897 TRAV8-6A0A0B4J262 113 aa9.75□□□□□ -0.85
SREBF1-217ENST00000577897 TINCRA0A1B0GVN0 87 aa9.75□□□□□ -0.85
SREBF1-217ENST00000577897 FGF6P10767 208 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms