RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 A0A1B0GXF2 115 aa6.06□□□□□ -1.44
CDKN2A-211ENST00000577854 SMR3BP02814 79 aaPredicted RBP6.06□□□□□ -1.44
CDKN2A-211ENST00000577854 XCL1P47992 114 aa6.06□□□□□ -1.44
CDKN2A-211ENST00000577854 POLR2KP53803 58 aaKnown RBP6.06□□□□□ -1.44
CDKN2A-211ENST00000577854 ORMDL3Q8N138 153 aa6.06□□□□□ -1.44
CDKN2A-211ENST00000577854 TMEM18Q96B42 140 aa6.06□□□□□ -1.44
CDKN2A-211ENST00000577854 AP5S1Q9NUS5 200 aa6.06□□□□□ -1.44
CDKN2A-211ENST00000577854 LRP1BQ9NZR2 4599 aa6.06□□□□□ -1.44
CDKN2A-211ENST00000577854 DNAH5Q8TE73 4624 aa6.05□□□□□ -1.44
CDKN2A-211ENST00000577854 EPM2AB3EWF7 344 aa6.05□□□□□ -1.44
CDKN2A-211ENST00000577854 NPYP01303 97 aa6.05□□□□□ -1.44
CDKN2A-211ENST00000577854 PPBPP02775 128 aa6.05□□□□□ -1.44
CDKN2A-211ENST00000577854 RAB5AP20339 215 aa6.05□□□□□ -1.44
CDKN2A-211ENST00000577854 XGP55808 180 aa6.05□□□□□ -1.44
CDKN2A-211ENST00000577854 COX19Q49B96 90 aa6.05□□□□□ -1.44
CDKN2A-211ENST00000577854 CFAP161Q6P656 301 aa6.05□□□□□ -1.44
CDKN2A-211ENST00000577854 TMEM136Q6ZRR5 245 aa6.05□□□□□ -1.44
CDKN2A-211ENST00000577854 Q8N1X5 172 aa6.05□□□□□ -1.44
CDKN2A-211ENST00000577854 CHCHD10Q8WYQ3 142 aaPredicted RBP6.05□□□□□ -1.44
CDKN2A-211ENST00000577854 PRELID3AQ96N28 172 aa6.05□□□□□ -1.44
CDKN2A-211ENST00000577854 C20orf78Q9BR46 151 aa6.05□□□□□ -1.44
CDKN2A-211ENST00000577854 SMIM2Q9BVW6 85 aa6.05□□□□□ -1.44
CDKN2A-211ENST00000577854 LOC389332A0A1B0GUA5 103 aa6.04□□□□□ -1.44
CDKN2A-211ENST00000577854 TCAPO15273 167 aa6.04□□□□□ -1.44
CDKN2A-211ENST00000577854 CCL25O15444 150 aa6.04□□□□□ -1.44
CDKN2A-211ENST00000577854 PRSS1P07477 247 aa6.04□□□□□ -1.44
CDKN2A-211ENST00000577854 ESDP10768 282 aa6.04□□□□□ -1.44
CDKN2A-211ENST00000577854 SS18Q15532 418 aa6.04□□□□□ -1.44
CDKN2A-211ENST00000577854 HIGD2BQ4VC39 106 aa6.04□□□□□ -1.44
CDKN2A-211ENST00000577854 RNASE13Q5GAN3 156 aaKnown RBP6.04□□□□□ -1.44
CDKN2A-211ENST00000577854 FAM30AQ9NZY2 134 aa6.04□□□□□ -1.44
CDKN2A-211ENST00000577854 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.03□□□□□ -1.44
CDKN2A-211ENST00000577854 TRAV13-1A0A0B4J241 112 aa6.03□□□□□ -1.44
CDKN2A-211ENST00000577854 FAM229AH3BQW9 127 aa6.03□□□□□ -1.44
CDKN2A-211ENST00000577854 Q5VSD8 79 aa6.03□□□□□ -1.44
CDKN2A-211ENST00000577854 MRPL52Q86TS9 123 aaKnown RBP6.03□□□□□ -1.44
CDKN2A-211ENST00000577854 ZNF664Q8N3J9 261 aa6.03□□□□□ -1.44
CDKN2A-211ENST00000577854 DPH3Q96FX2 82 aa6.03□□□□□ -1.44
CDKN2A-211ENST00000577854 KRTAP4-5Q9BYR2 181 aa6.03□□□□□ -1.44
CDKN2A-211ENST00000577854 MAP1LC3AQ9H492 121 aa6.03□□□□□ -1.44
CDKN2A-211ENST00000577854 TRBV24-1A0A075B6N3 115 aa6.02□□□□□ -1.45
CDKN2A-211ENST00000577854 LINC00959A0A1B0GUT2 108 aa6.02□□□□□ -1.45
CDKN2A-211ENST00000577854 PHOX2AO14813 284 aa6.02□□□□□ -1.45
CDKN2A-211ENST00000577854 MALP21145 153 aa6.02□□□□□ -1.45
CDKN2A-211ENST00000577854 RPL39P62891 51 aaKnown RBP6.02□□□□□ -1.45
CDKN2A-211ENST00000577854 KRTAP26-1Q6PEX3 210 aa6.02□□□□□ -1.45
CDKN2A-211ENST00000577854 UBE2D4Q9Y2X8 147 aa6.02□□□□□ -1.45
CDKN2A-211ENST00000577854 MT-ND6P03923 174 aa6.01□□□□□ -1.45
CDKN2A-211ENST00000577854 RPL32P62910 135 aaKnown RBP6.01□□□□□ -1.45
CDKN2A-211ENST00000577854 Q6ZUT4 128 aa6.01□□□□□ -1.45
CDKN2A-211ENST00000577854 CBLN2Q8IUK8 224 aa6.01□□□□□ -1.45
CDKN2A-211ENST00000577854 CDC42SE2Q9NRR3 84 aa6.01□□□□□ -1.45
CDKN2A-211ENST00000577854 PCLOQ9Y6V0 5065 aa6.01□□□□□ -1.45
CDKN2A-211ENST00000577854 C1orf196B1AJZ1 125 aa6□□□□□ -1.45
CDKN2A-211ENST00000577854 FOXI1Q12951 378 aa6□□□□□ -1.45
CDKN2A-211ENST00000577854 KIAA1644Q3SXP7 199 aa6□□□□□ -1.45
CDKN2A-211ENST00000577854 GNB1LQ9BYB4 327 aa6□□□□□ -1.45
CDKN2A-211ENST00000577854 LAMTOR2Q9Y2Q5 125 aa6□□□□□ -1.45
CDKN2A-211ENST00000577854 APOBP04114 4563 aaKnown RBP6□□□□□ -1.45
CDKN2A-211ENST00000577854 IGHV3-64A0A075B6Q5 118 aa5.99□□□□□ -1.45
CDKN2A-211ENST00000577854 TGIF2-C20orf24A0A0A6YYL0 155 aa5.99□□□□□ -1.45
CDKN2A-211ENST00000577854 IFITM10A6NMD0 228 aa5.99□□□□□ -1.45
CDKN2A-211ENST00000577854 COX7A2LO14548 114 aa5.99□□□□□ -1.45
CDKN2A-211ENST00000577854 IFI27P40305 119 aaPredicted RBP5.99□□□□□ -1.45
CDKN2A-211ENST00000577854 CD164L2Q6UWJ8 174 aa5.99□□□□□ -1.45
CDKN2A-211ENST00000577854 SCXQ7RTU7 201 aa5.99□□□□□ -1.45
CDKN2A-211ENST00000577854 C15orf56Q8N910 161 aa5.99□□□□□ -1.45
CDKN2A-211ENST00000577854 CHAC1Q9BUX1 264 aa5.99□□□□□ -1.45
CDKN2A-211ENST00000577854 SPANXA1Q9NS26 97 aa5.99□□□□□ -1.45
CDKN2A-211ENST00000577854 HSPG2P98160 4391 aa5.98□□□□□ -1.45
CDKN2A-211ENST00000577854 ABCA13Q86UQ4 5058 aa5.98□□□□□ -1.45
CDKN2A-211ENST00000577854 IGHV1-58A0A0C4DH39 117 aa5.98□□□□□ -1.45
CDKN2A-211ENST00000577854 ZNF561-AS1K7EIQ3 104 aa5.98□□□□□ -1.45
CDKN2A-211ENST00000577854 Q6ZSA8 131 aa5.98□□□□□ -1.45
CDKN2A-211ENST00000577854 LINC00528Q8N1L1 170 aa5.98□□□□□ -1.45
CDKN2A-211ENST00000577854 C9orf163Q8N9P6 203 aa5.98□□□□□ -1.45
CDKN2A-211ENST00000577854 LINC00526Q96FQ7 95 aa5.98□□□□□ -1.45
CDKN2A-211ENST00000577854 YPEL4Q96NS1 127 aa5.98□□□□□ -1.45
CDKN2A-211ENST00000577854 OPRPNQ99935 248 aaPredicted RBP5.98□□□□□ -1.45
CDKN2A-211ENST00000577854 TIMM21Q9BVV7 248 aa5.98□□□□□ -1.45
CDKN2A-211ENST00000577854 KRTAP17-1Q9BYP8 105 aa5.98□□□□□ -1.45
CDKN2A-211ENST00000577854 CSDC2Q9Y534 153 aaKnown RBP5.98□□□□□ -1.45
CDKN2A-211ENST00000577854 TRAPPC1Q9Y5R8 145 aa5.98□□□□□ -1.45
CDKN2A-211ENST00000577854 SCO1O75880 301 aa5.97□□□□□ -1.45
CDKN2A-211ENST00000577854 INAFM2P0DMQ5 153 aa5.97□□□□□ -1.45
CDKN2A-211ENST00000577854 CNBPP62633 177 aaKnown RBP5.97□□□□□ -1.45
CDKN2A-211ENST00000577854 ORMDL2Q53FV1 153 aa5.97□□□□□ -1.45
CDKN2A-211ENST00000577854 Q6ZN92 141 aa5.97□□□□□ -1.45
CDKN2A-211ENST00000577854 C5orf38Q86SI9 138 aa5.97□□□□□ -1.45
CDKN2A-211ENST00000577854 Q8N8P6 123 aa5.97□□□□□ -1.45
CDKN2A-211ENST00000577854 CIRBP-AS1Q8TBR5 109 aa5.97□□□□□ -1.45
CDKN2A-211ENST00000577854 NXT2Q9NPJ8 142 aaKnown RBP5.97□□□□□ -1.45
CDKN2A-211ENST00000577854 CYSLTR1Q9Y271 337 aa5.97□□□□□ -1.45
CDKN2A-211ENST00000577854 GVQW2A0A096LPI5 108 aaPredicted RBP5.96□□□□□ -1.46
CDKN2A-211ENST00000577854 IGKV2-24A0A0C4DH68 120 aa5.96□□□□□ -1.46
CDKN2A-211ENST00000577854 COLCA2A8K830 154 aa5.96□□□□□ -1.46
CDKN2A-211ENST00000577854 APOMO95445 188 aa5.96□□□□□ -1.46
CDKN2A-211ENST00000577854 PLA2G1BP04054 148 aaKnown RBP5.96□□□□□ -1.46
CDKN2A-211ENST00000577854 FABP9Q0Z7S8 132 aa5.96□□□□□ -1.46
CDKN2A-211ENST00000577854 C2orf66Q6UXQ4 117 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms