RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 J3QQQ9 107 aa6.27□□□□□ -1.41
RPAIN-215ENST00000575112 MUSTN1Q8IVN3 82 aa6.27□□□□□ -1.41
RPAIN-215ENST00000575112 MRPL53Q96EL3 112 aaKnown RBP6.27□□□□□ -1.41
RPAIN-215ENST00000575112 HIVEP1P15822 2718 aa6.27□□□□□ -1.41
RPAIN-215ENST00000575112 STAB1Q9NY15 2570 aa6.27□□□□□ -1.41
RPAIN-215ENST00000575112 LINC00158P58513 81 aa6.27□□□□□ -1.41
RPAIN-215ENST00000575112 TMEM101Q96IK0 257 aa6.27□□□□□ -1.41
RPAIN-215ENST00000575112 KIF25-AS1Q9Y6Z4 181 aa6.27□□□□□ -1.41
RPAIN-215ENST00000575112 SLC25A29Q8N8R3 303 aa6.26□□□□□ -1.41
RPAIN-215ENST00000575112 TIMM21Q9BVV7 248 aa6.26□□□□□ -1.41
RPAIN-215ENST00000575112 PRO1854Q9UHT4 67 aa6.26□□□□□ -1.41
RPAIN-215ENST00000575112 K7EQG2 157 aa6.26□□□□□ -1.41
RPAIN-215ENST00000575112 I3L3M4 83 aa6.26□□□□□ -1.41
RPAIN-215ENST00000575112 CCL24O00175 119 aa6.26□□□□□ -1.41
RPAIN-215ENST00000575112 DNAL4O96015 105 aa6.26□□□□□ -1.41
RPAIN-215ENST00000575112 PFN2P35080 140 aa6.26□□□□□ -1.41
RPAIN-215ENST00000575112 GAGE6Q13070 117 aa6.26□□□□□ -1.41
RPAIN-215ENST00000575112 TTC32Q5I0X7 151 aa6.26□□□□□ -1.41
RPAIN-215ENST00000575112 PRIMA1Q86XR5 153 aa6.26□□□□□ -1.41
RPAIN-215ENST00000575112 RS1O15537 224 aa6.25□□□□□ -1.41
RPAIN-215ENST00000575112 DSCR9P59020 149 aa6.25□□□□□ -1.41
RPAIN-215ENST00000575112 IGLV1-40P01703 118 aa6.25□□□□□ -1.41
RPAIN-215ENST00000575112 IGHV3-33P01772 117 aa6.25□□□□□ -1.41
RPAIN-215ENST00000575112 ADAMTSL4-AS1Q5T5F5 129 aa6.25□□□□□ -1.41
RPAIN-215ENST00000575112 Q6ZSN1 163 aa6.25□□□□□ -1.41
RPAIN-215ENST00000575112 Q6ZTI0 123 aa6.25□□□□□ -1.41
RPAIN-215ENST00000575112 CLEC2BQ92478 149 aa6.25□□□□□ -1.41
RPAIN-215ENST00000575112 ZNF702PQ9H963 129 aa6.25□□□□□ -1.41
RPAIN-215ENST00000575112 POLR2KP53803 58 aaKnown RBP6.25□□□□□ -1.41
RPAIN-215ENST00000575112 M0R2P5 195 aa6.24□□□□□ -1.41
RPAIN-215ENST00000575112 SOCS3O14543 225 aa6.24□□□□□ -1.41
RPAIN-215ENST00000575112 ATP6V0E2Q8NHE4 81 aa6.24□□□□□ -1.41
RPAIN-215ENST00000575112 CITED1Q99966 193 aa6.24□□□□□ -1.41
RPAIN-215ENST00000575112 SNCGO76070 127 aa6.24□□□□□ -1.41
RPAIN-215ENST00000575112 RBMY1A1P0DJD3 496 aaKnown RBP6.24□□□□□ -1.41
RPAIN-215ENST00000575112 RBMY1CP0DJD4 496 aa6.24□□□□□ -1.41
RPAIN-215ENST00000575112 RPL36AP83881 106 aaKnown RBP6.24□□□□□ -1.41
RPAIN-215ENST00000575112 RBMY1FQ15415 496 aaKnown RBP6.24□□□□□ -1.41
RPAIN-215ENST00000575112 ZFAND6Q6FIF0 208 aa6.24□□□□□ -1.41
RPAIN-215ENST00000575112 TEX29Q8N6K0 151 aa6.24□□□□□ -1.41
RPAIN-215ENST00000575112 TMEM263Q8WUH6 116 aaKnown RBP6.24□□□□□ -1.41
RPAIN-215ENST00000575112 RPL36ALQ969Q0 106 aaKnown RBP6.24□□□□□ -1.41
RPAIN-215ENST00000575112 COL6A5A8TX70 2615 aa6.24□□□□□ -1.41
RPAIN-215ENST00000575112 PAX4O43316 350 aa6.24□□□□□ -1.41
RPAIN-215ENST00000575112 TRIAP1O43715 76 aa6.24□□□□□ -1.41
RPAIN-215ENST00000575112 NXPH4O95158 308 aa6.24□□□□□ -1.41
RPAIN-215ENST00000575112 INSP01308 110 aa6.24□□□□□ -1.41
RPAIN-215ENST00000575112 ODF3Q96PU9 254 aa6.24□□□□□ -1.41
RPAIN-215ENST00000575112 LENEPQ9Y5L5 61 aa6.24□□□□□ -1.41
RPAIN-215ENST00000575112 LOC100131303A0A0U1RQF7 123 aa6.23□□□□□ -1.41
RPAIN-215ENST00000575112 SHISA2Q6UWI4 295 aa6.23□□□□□ -1.41
RPAIN-215ENST00000575112 SBSPONQ8IVN8 264 aa6.23□□□□□ -1.41
RPAIN-215ENST00000575112 NDUFA12Q9UI09 145 aa6.23□□□□□ -1.41
RPAIN-215ENST00000575112 DNAJC9-AS1A6NH13 148 aa6.23□□□□□ -1.41
RPAIN-215ENST00000575112 H3BMM0 161 aa6.23□□□□□ -1.41
RPAIN-215ENST00000575112 M0QY20 66 aa6.23□□□□□ -1.41
RPAIN-215ENST00000575112 MAP6D1Q9H9H5 199 aa6.23□□□□□ -1.41
RPAIN-215ENST00000575112 Q6YL49 198 aa6.22□□□□□ -1.41
RPAIN-215ENST00000575112 ZNF22P17026 224 aaPredicted RBP6.22□□□□□ -1.41
RPAIN-215ENST00000575112 FAM104AQ969W3 186 aa6.22□□□□□ -1.41
RPAIN-215ENST00000575112 LINC00467Q9BRT7 94 aa6.22□□□□□ -1.41
RPAIN-215ENST00000575112 H3BUA1 57 aa6.22□□□□□ -1.41
RPAIN-215ENST00000575112 NDUFV3P56181 108 aaKnown RBP6.22□□□□□ -1.41
RPAIN-215ENST00000575112 C5orf38Q86SI9 138 aa6.22□□□□□ -1.41
RPAIN-215ENST00000575112 SMIM20Q8N5G0 67 aa6.22□□□□□ -1.41
RPAIN-215ENST00000575112 IGLV10-54A0A075B6I4 117 aa6.21□□□□□ -1.41
RPAIN-215ENST00000575112 KLLNB2CW77 178 aa6.21□□□□□ -1.41
RPAIN-215ENST00000575112 K7EMT4 169 aa6.21□□□□□ -1.41
RPAIN-215ENST00000575112 C2orf82Q6UX34 121 aa6.21□□□□□ -1.41
RPAIN-215ENST00000575112 LINC00482Q8N8I6 264 aa6.21□□□□□ -1.41
RPAIN-215ENST00000575112 TMEM141Q96I45 108 aa6.21□□□□□ -1.42
RPAIN-215ENST00000575112 TMEM223A0PJW6 202 aa6.21□□□□□ -1.42
RPAIN-215ENST00000575112 RBMY1BA6NDE4 496 aaKnown RBP6.21□□□□□ -1.42
RPAIN-215ENST00000575112 RBMY1EA6NEQ0 496 aaKnown RBP6.21□□□□□ -1.42
RPAIN-215ENST00000575112 RBMY1DP0C7P1 496 aaKnown RBP6.21□□□□□ -1.42
RPAIN-215ENST00000575112 LINC01620Q4KN68 170 aa6.21□□□□□ -1.42
RPAIN-215ENST00000575112 C15orf53Q8NAA6 179 aa6.21□□□□□ -1.42
RPAIN-215ENST00000575112 C20orf203Q8NBC4 194 aa6.21□□□□□ -1.42
RPAIN-215ENST00000575112 GAGE2BQ13066 116 aa6.2□□□□□ -1.42
RPAIN-215ENST00000575112 GAGE2EQ4V326 116 aa6.2□□□□□ -1.42
RPAIN-215ENST00000575112 C6orf226Q5I0X4 101 aa6.2□□□□□ -1.42
RPAIN-215ENST00000575112 FAM19A4Q96LR4 140 aa6.2□□□□□ -1.42
RPAIN-215ENST00000575112 GAGE2DQ9UEU5 116 aa6.2□□□□□ -1.42
RPAIN-215ENST00000575112 A0A0J9YXY3 114 aa6.2□□□□□ -1.42
RPAIN-215ENST00000575112 RHODO00212 210 aa6.2□□□□□ -1.42
RPAIN-215ENST00000575112 MALP21145 153 aa6.2□□□□□ -1.42
RPAIN-215ENST00000575112 DEFB114Q30KQ6 69 aa6.2□□□□□ -1.42
RPAIN-215ENST00000575112 CDKN2A-AS1Q9UH64 79 aa6.2□□□□□ -1.42
RPAIN-215ENST00000575112 IGHV3-30-3P0DP02 117 aa6.19□□□□□ -1.42
RPAIN-215ENST00000575112 HERV-K104P63124 156 aa6.19□□□□□ -1.42
RPAIN-215ENST00000575112 LITAFQ99732 161 aa6.19□□□□□ -1.42
RPAIN-215ENST00000575112 Q9H8V8 135 aa6.19□□□□□ -1.42
RPAIN-215ENST00000575112 IGLV4-3A0A075B6K6 122 aa6.19□□□□□ -1.42
RPAIN-215ENST00000575112 H7C423 109 aa6.19□□□□□ -1.42
RPAIN-215ENST00000575112 TRBV27A0A0K0K1C4 114 aa6.18□□□□□ -1.42
RPAIN-215ENST00000575112 J3QLI3 93 aa6.18□□□□□ -1.42
RPAIN-215ENST00000575112 XCL1P47992 114 aa6.18□□□□□ -1.42
RPAIN-215ENST00000575112 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.18□□□□□ -1.42
RPAIN-215ENST00000575112 NSD1Q96L73 2696 aaPredicted RBP6.18□□□□□ -1.42
RPAIN-215ENST00000575112 TIMM17AQ99595 171 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms