RNA–Protein interactions for RNA: ENST00000573023.6

SLC12A4-212, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-212ENST00000573023 ATXN8Q156A1 80 aa13.72□□□□□ -0.21
SLC12A4-212ENST00000573023 C1QTNF4Q9BXJ3 329 aa13.72□□□□□ -0.21
SLC12A4-212ENST00000573023 IGHV1-58A0A0C4DH39 117 aa13.72□□□□□ -0.21
SLC12A4-212ENST00000573023 UBE2D1P51668 147 aa13.72□□□□□ -0.21
SLC12A4-212ENST00000573023 C2orf82Q6UX34 121 aa13.71□□□□□ -0.21
SLC12A4-212ENST00000573023 RPL13AP40429 203 aaKnown RBP13.71□□□□□ -0.21
SLC12A4-212ENST00000573023 NTN5Q8WTR8 489 aaPredicted RBP13.71□□□□□ -0.21
SLC12A4-212ENST00000573023 NF1P21359 2839 aa13.7□□□□□ -0.22
SLC12A4-212ENST00000573023 ODF3L2Q3SX64 289 aa13.7□□□□□ -0.22
SLC12A4-212ENST00000573023 NDUFA7O95182 113 aa13.7□□□□□ -0.22
SLC12A4-212ENST00000573023 ANKRD29Q8N6D5 301 aa13.69□□□□□ -0.22
SLC12A4-212ENST00000573023 A0A096LPF7 62 aa13.69□□□□□ -0.22
SLC12A4-212ENST00000573023 FBN2P35556 2912 aa13.68□□□□□ -0.22
SLC12A4-212ENST00000573023 TEN1Q86WV5 123 aa13.68□□□□□ -0.22
SLC12A4-212ENST00000573023 OR13C6PQ8NH95 151 aa13.68□□□□□ -0.22
SLC12A4-212ENST00000573023 POM121L12Q8N7R1 296 aa13.67□□□□□ -0.22
SLC12A4-212ENST00000573023 TMEM243Q9BU79 118 aa13.67□□□□□ -0.22
SLC12A4-212ENST00000573023 IGHV3-33P01772 117 aa13.67□□□□□ -0.22
SLC12A4-212ENST00000573023 LINC00158P58513 81 aa13.67□□□□□ -0.22
SLC12A4-212ENST00000573023 VSIG2Q96IQ7 327 aa13.66□□□□□ -0.22
SLC12A4-212ENST00000573023 MXRA5Q9NR99 2828 aa13.66□□□□□ -0.22
SLC12A4-212ENST00000573023 RNF152Q8N8N0 203 aa13.66□□□□□ -0.22
SLC12A4-212ENST00000573023 DNAJC30Q96LL9 226 aa13.66□□□□□ -0.22
SLC12A4-212ENST00000573023 UBE2D4Q9Y2X8 147 aa13.66□□□□□ -0.22
SLC12A4-212ENST00000573023 K7EQD1 137 aa13.66□□□□□ -0.22
SLC12A4-212ENST00000573023 HTN3P15516 51 aa13.65□□□□□ -0.22
SLC12A4-212ENST00000573023 HERVK_113P63121 156 aa13.65□□□□□ -0.22
SLC12A4-212ENST00000573023 A0A1B0GV72 72 aa13.65□□□□□ -0.22
SLC12A4-212ENST00000573023 CLEC2BQ92478 149 aa13.65□□□□□ -0.22
SLC12A4-212ENST00000573023 PYGO1Q9Y3Y4 419 aa13.65□□□□□ -0.22
SLC12A4-212ENST00000573023 SNCGO76070 127 aa13.64□□□□□ -0.23
SLC12A4-212ENST00000573023 A0A096LNT2 108 aa13.63□□□□□ -0.23
SLC12A4-212ENST00000573023 TINCRA0A1B0GVN0 87 aa13.63□□□□□ -0.23
SLC12A4-212ENST00000573023 PFN2P35080 140 aa13.63□□□□□ -0.23
SLC12A4-212ENST00000573023 LINC01620Q4KN68 170 aa13.63□□□□□ -0.23
SLC12A4-212ENST00000573023 CHCHD7Q9BUK0 85 aa13.63□□□□□ -0.23
SLC12A4-212ENST00000573023 MRPS36P82909 103 aaKnown RBP13.63□□□□□ -0.23
SLC12A4-212ENST00000573023 CLPSL2Q6UWE3 100 aa13.63□□□□□ -0.23
SLC12A4-212ENST00000573023 HELZ2Q9BYK8 2649 aaKnown RBP13.62□□□□□ -0.23
SLC12A4-212ENST00000573023 ADAMTSL4-AS1Q5T5F5 129 aa13.62□□□□□ -0.23
SLC12A4-212ENST00000573023 CKS1BP61024 79 aa13.62□□□□□ -0.23
SLC12A4-212ENST00000573023 C1orf158Q8N1D5 194 aa13.62□□□□□ -0.23
SLC12A4-212ENST00000573023 LOC100131303A0A0U1RQF7 123 aa13.62□□□□□ -0.23
SLC12A4-212ENST00000573023 PLA2G2AP14555 144 aa13.62□□□□□ -0.23
SLC12A4-212ENST00000573023 ICOSQ9Y6W8 199 aa13.62□□□□□ -0.23
SLC12A4-212ENST00000573023 LRRC75A-AS1Q8N1F1 130 aa13.61□□□□□ -0.23
SLC12A4-212ENST00000573023 LINC01006Q8NI28 216 aa13.61□□□□□ -0.23
SLC12A4-212ENST00000573023 TMEM263Q8WUH6 116 aaKnown RBP13.61□□□□□ -0.23
SLC12A4-212ENST00000573023 LINC00694P0DN24 101 aa13.61□□□□□ -0.23
SLC12A4-212ENST00000573023 C5orf38Q86SI9 138 aa13.61□□□□□ -0.23
SLC12A4-212ENST00000573023 TRAV8-4A0A0B4J246 113 aa13.6□□□□□ -0.23
SLC12A4-212ENST00000573023 RS1O15537 224 aa13.6□□□□□ -0.23
SLC12A4-212ENST00000573023 TRIAP1O43715 76 aa13.6□□□□□ -0.23
SLC12A4-212ENST00000573023 TRAV25A0A0B4J276 109 aa13.6□□□□□ -0.23
SLC12A4-212ENST00000573023 ESM1Q9NQ30 184 aa13.6□□□□□ -0.23
SLC12A4-212ENST00000573023 MIAQ16674 131 aa13.59□□□□□ -0.23
SLC12A4-212ENST00000573023 COPS9Q8WXC6 57 aa13.59□□□□□ -0.23
SLC12A4-212ENST00000573023 CARD19Q96LW7 228 aa13.59□□□□□ -0.23
SLC12A4-212ENST00000573023 CMC4P56277 68 aaPredicted RBP13.59□□□□□ -0.23
SLC12A4-212ENST00000573023 UBE2D3P61077 147 aa13.59□□□□□ -0.23
SLC12A4-212ENST00000573023 UBE2D2P62837 147 aa13.59□□□□□ -0.23
SLC12A4-212ENST00000573023 DAZ2Q13117 558 aaKnown RBP13.59□□□□□ -0.23
SLC12A4-212ENST00000573023 DAZ4Q86SG3 579 aaKnown RBP13.59□□□□□ -0.23
SLC12A4-212ENST00000573023 AMELXQ99217 191 aa13.59□□□□□ -0.23
SLC12A4-212ENST00000573023 DAZ3Q9NR90 486 aaKnown RBP13.59□□□□□ -0.23
SLC12A4-212ENST00000573023 A0A0B4J2C4 111 aa13.58□□□□□ -0.23
SLC12A4-212ENST00000573023 CSMD2Q7Z408 3487 aa13.58□□□□□ -0.24
SLC12A4-212ENST00000573023 COX6A2Q02221 97 aa13.58□□□□□ -0.24
SLC12A4-212ENST00000573023 C6orf226Q5I0X4 101 aa13.58□□□□□ -0.24
SLC12A4-212ENST00000573023 C11orf72Q8NBR9 251 aa13.58□□□□□ -0.24
SLC12A4-212ENST00000573023 DEFB4AO15263 64 aa13.57□□□□□ -0.24
SLC12A4-212ENST00000573023 SMCPP49901 116 aaPredicted RBP13.57□□□□□ -0.24
SLC12A4-212ENST00000573023 TTC32Q5I0X7 151 aa13.57□□□□□ -0.24
SLC12A4-212ENST00000573023 UBE2WQ96B02 151 aa13.57□□□□□ -0.24
SLC12A4-212ENST00000573023 PAX4O43316 350 aa13.57□□□□□ -0.24
SLC12A4-212ENST00000573023 MT-ATP8P03928 68 aa13.57□□□□□ -0.24
SLC12A4-212ENST00000573023 NBEAL2Q6ZNJ1 2754 aa13.56□□□□□ -0.24
SLC12A4-212ENST00000573023 TEX49A0A1B0GTD5 131 aa13.56□□□□□ -0.24
SLC12A4-212ENST00000573023 TMEM86BQ8N661 226 aa13.56□□□□□ -0.24
SLC12A4-212ENST00000573023 PRO0461Q9UI25 63 aa13.56□□□□□ -0.24
SLC12A4-212ENST00000573023 CRLF1O75462 422 aa13.56□□□□□ -0.24
SLC12A4-212ENST00000573023 DNAL4O96015 105 aa13.56□□□□□ -0.24
SLC12A4-212ENST00000573023 FSHBP01225 129 aa13.56□□□□□ -0.24
SLC12A4-212ENST00000573023 C16orf74Q96GX8 76 aa13.55□□□□□ -0.24
SLC12A4-212ENST00000573023 SMR3AQ99954 134 aa13.55□□□□□ -0.24
SLC12A4-212ENST00000573023 GAGE2BQ13066 116 aa13.54□□□□□ -0.24
SLC12A4-212ENST00000573023 GAGE2EQ4V326 116 aa13.54□□□□□ -0.24
SLC12A4-212ENST00000573023 GAGE2DQ9UEU5 116 aa13.54□□□□□ -0.24
SLC12A4-212ENST00000573023 TRAV4A0A0B4J268 109 aa13.54□□□□□ -0.24
SLC12A4-212ENST00000573023 XCL1P47992 114 aa13.54□□□□□ -0.24
SLC12A4-212ENST00000573023 TRBV10-1A0A0K0K1A3 114 aa13.54□□□□□ -0.24
SLC12A4-212ENST00000573023 CRPP02741 224 aa13.54□□□□□ -0.24
SLC12A4-212ENST00000573023 CRYBA4P53673 196 aa13.54□□□□□ -0.24
SLC12A4-212ENST00000573023 ZFAND6Q6FIF0 208 aa13.54□□□□□ -0.24
SLC12A4-212ENST00000573023 LINC00242Q5T6M2 205 aa13.53□□□□□ -0.24
SLC12A4-212ENST00000573023 RNASE1P07998 156 aaKnown RBP13.53□□□□□ -0.24
SLC12A4-212ENST00000573023 PIK3CD-AS1Q5SR53 167 aa13.53□□□□□ -0.24
SLC12A4-212ENST00000573023 ANAPC13Q9BS18 74 aa13.53□□□□□ -0.24
SLC12A4-212ENST00000573023 IFITM1P13164 125 aa13.52□□□□□ -0.25
SLC12A4-212ENST00000573023 J3QKU1 62 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms