RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 LINC00588Q9Y4M8 146 aa9.33□□□□□ -0.92
RPAIN-209ENST00000571558 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.32□□□□□ -0.92
RPAIN-209ENST00000571558 IGKV2-29A2NJV5 120 aaPredicted RBP9.32□□□□□ -0.92
RPAIN-209ENST00000571558 RPL39P62891 51 aaKnown RBP9.32□□□□□ -0.92
RPAIN-209ENST00000571558 C2orf66Q6UXQ4 117 aa9.32□□□□□ -0.92
RPAIN-209ENST00000571558 FAM19A2Q8N3H0 131 aa9.32□□□□□ -0.92
RPAIN-209ENST00000571558 TOMM6Q96B49 74 aa9.32□□□□□ -0.92
RPAIN-209ENST00000571558 MRPS16Q9Y3D3 137 aaKnown RBP9.32□□□□□ -0.92
RPAIN-209ENST00000571558 H7C423 109 aa9.31□□□□□ -0.92
RPAIN-209ENST00000571558 J3QL48 77 aa9.31□□□□□ -0.92
RPAIN-209ENST00000571558 BTF3P20290 206 aaKnown RBP9.31□□□□□ -0.92
RPAIN-209ENST00000571558 CCL18P55774 89 aa9.31□□□□□ -0.92
RPAIN-209ENST00000571558 SNRPEP62304 92 aaKnown RBP9.31□□□□□ -0.92
RPAIN-209ENST00000571558 PDZD11Q5EBL8 140 aa9.31□□□□□ -0.92
RPAIN-209ENST00000571558 CYSLTR1Q9Y271 337 aa9.31□□□□□ -0.92
RPAIN-209ENST00000571558 HBDP02042 147 aa9.31□□□□□ -0.92
RPAIN-209ENST00000571558 INAFM2P0DMQ5 153 aa9.31□□□□□ -0.92
RPAIN-209ENST00000571558 G0S2P27469 103 aa9.31□□□□□ -0.92
RPAIN-209ENST00000571558 MRPL52Q86TS9 123 aaKnown RBP9.31□□□□□ -0.92
RPAIN-209ENST00000571558 WFDC10BQ8IUB3 73 aa9.31□□□□□ -0.92
RPAIN-209ENST00000571558 HIST3H2BBQ8N257 126 aa9.31□□□□□ -0.92
RPAIN-209ENST00000571558 CHCHD5Q9BSY4 110 aa9.31□□□□□ -0.92
RPAIN-209ENST00000571558 UPK3BQ9BT76 320 aa9.31□□□□□ -0.92
RPAIN-209ENST00000571558 UBE2D4Q9Y2X8 147 aa9.31□□□□□ -0.92
RPAIN-209ENST00000571558 IGIPA6NJ69 53 aa9.3□□□□□ -0.92
RPAIN-209ENST00000571558 IFITM10A6NMD0 228 aa9.3□□□□□ -0.92
RPAIN-209ENST00000571558 FAM104AQ969W3 186 aa9.3□□□□□ -0.92
RPAIN-209ENST00000571558 TIMM21Q9BVV7 248 aa9.3□□□□□ -0.92
RPAIN-209ENST00000571558 TRAV8-6A0A0B4J262 113 aa9.29□□□□□ -0.92
RPAIN-209ENST00000571558 LINC01549A6NIU2 74 aa9.29□□□□□ -0.92
RPAIN-209ENST00000571558 FGF6P10767 208 aa9.29□□□□□ -0.92
RPAIN-209ENST00000571558 GAGE6Q13070 117 aa9.29□□□□□ -0.92
RPAIN-209ENST00000571558 TTC32Q5I0X7 151 aa9.29□□□□□ -0.92
RPAIN-209ENST00000571558 TMEM18Q96B42 140 aa9.29□□□□□ -0.92
RPAIN-209ENST00000571558 PACRGQ96M98 296 aaPredicted RBP9.29□□□□□ -0.92
RPAIN-209ENST00000571558 SPANXA1Q9NS26 97 aa9.29□□□□□ -0.92
RPAIN-209ENST00000571558 PYGO1Q9Y3Y4 419 aa9.29□□□□□ -0.92
RPAIN-209ENST00000571558 SRRM2Q9UQ35 2752 aaKnown RBP9.28□□□□□ -0.92
RPAIN-209ENST00000571558 UBE2L6O14933 153 aa9.28□□□□□ -0.92
RPAIN-209ENST00000571558 MPV17L2Q567V2 206 aa9.28□□□□□ -0.92
RPAIN-209ENST00000571558 ERASQ7Z444 233 aa9.28□□□□□ -0.92
RPAIN-209ENST00000571558 Q8N3U1 123 aa9.28□□□□□ -0.92
RPAIN-209ENST00000571558 CSDC2Q9Y534 153 aaKnown RBP9.28□□□□□ -0.92
RPAIN-209ENST00000571558 A0A1B0GUV1 79 aa9.27□□□□□ -0.93
RPAIN-209ENST00000571558 ZNF25P17030 456 aaPredicted RBP9.27□□□□□ -0.93
RPAIN-209ENST00000571558 RBX1P62877 108 aa9.27□□□□□ -0.93
RPAIN-209ENST00000571558 LINC00173Q6ZV60 143 aa9.27□□□□□ -0.93
RPAIN-209ENST00000571558 TIMM17AQ99595 171 aa9.27□□□□□ -0.93
RPAIN-209ENST00000571558 HIST1H2BLQ99880 126 aa9.27□□□□□ -0.93
RPAIN-209ENST00000571558 IGLV4-60A0A075B6I1 120 aa9.26□□□□□ -0.93
RPAIN-209ENST00000571558 LCE2BO14633 110 aa9.26□□□□□ -0.93
RPAIN-209ENST00000571558 NPSP0C0P6 89 aa9.26□□□□□ -0.93
RPAIN-209ENST00000571558 DNAH10OSP0CZ25 163 aa9.26□□□□□ -0.93
RPAIN-209ENST00000571558 PKIAP61925 76 aa9.26□□□□□ -0.93
RPAIN-209ENST00000571558 LINC01556Q5JQF7 62 aa9.26□□□□□ -0.93
RPAIN-209ENST00000571558 SCGB3A1Q96QR1 104 aa9.26□□□□□ -0.93
RPAIN-209ENST00000571558 IGLV4-3A0A075B6K6 122 aa9.25□□□□□ -0.93
RPAIN-209ENST00000571558 TMEM262E9PQX1 116 aa9.25□□□□□ -0.93
RPAIN-209ENST00000571558 LEPROTL1O95214 131 aa9.25□□□□□ -0.93
RPAIN-209ENST00000571558 FABP4P15090 132 aa9.25□□□□□ -0.93
RPAIN-209ENST00000571558 KRTAP10-2P60368 255 aa9.25□□□□□ -0.93
RPAIN-209ENST00000571558 MRPS36P82909 103 aaKnown RBP9.25□□□□□ -0.93
RPAIN-209ENST00000571558 AMMECR1LQ6DCA0 310 aa9.25□□□□□ -0.93
RPAIN-209ENST00000571558 Q8N976 141 aa9.25□□□□□ -0.93
RPAIN-209ENST00000571558 TMEM141Q96I45 108 aa9.25□□□□□ -0.93
RPAIN-209ENST00000571558 OPRPNQ99935 248 aaPredicted RBP9.25□□□□□ -0.93
RPAIN-209ENST00000571558 Q9H8V8 135 aa9.25□□□□□ -0.93
RPAIN-209ENST00000571558 CDC42SE2Q9NRR3 84 aa9.25□□□□□ -0.93
RPAIN-209ENST00000571558 A0A087WX48 190 aa9.24□□□□□ -0.93
RPAIN-209ENST00000571558 SIVA1O15304 175 aa9.24□□□□□ -0.93
RPAIN-209ENST00000571558 SMAGPQ0VAQ4 97 aa9.24□□□□□ -0.93
RPAIN-209ENST00000571558 Q6ZUT4 128 aa9.24□□□□□ -0.93
RPAIN-209ENST00000571558 PGPEP1Q9NXJ5 209 aa9.24□□□□□ -0.93
RPAIN-209ENST00000571558 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.23□□□□□ -0.93
RPAIN-209ENST00000571558 ATP5LO75964 103 aa9.23□□□□□ -0.93
RPAIN-209ENST00000571558 ZNF664Q8N3J9 261 aa9.23□□□□□ -0.93
RPAIN-209ENST00000571558 OR5A1Q8NGJ0 315 aa9.23□□□□□ -0.93
RPAIN-209ENST00000571558 HSPB8Q9UJY1 196 aa9.23□□□□□ -0.93
RPAIN-209ENST00000571558 MYCBP2O75592 4640 aa9.23□□□□□ -0.93
RPAIN-209ENST00000571558 S100A2P29034 98 aa9.22□□□□□ -0.93
RPAIN-209ENST00000571558 BAALCQ8WXS3 180 aa9.22□□□□□ -0.93
RPAIN-209ENST00000571558 IFI27L1Q96BM0 104 aa9.22□□□□□ -0.93
RPAIN-209ENST00000571558 TMEM101Q96IK0 257 aa9.22□□□□□ -0.93
RPAIN-209ENST00000571558 IGHV3-30P01768 117 aa9.22□□□□□ -0.93
RPAIN-209ENST00000571558 IGHV3-33P01772 117 aa9.22□□□□□ -0.93
RPAIN-209ENST00000571558 IGHV3-30-3P0DP02 117 aa9.22□□□□□ -0.93
RPAIN-209ENST00000571558 IGHV3-30-5P0DP03 117 aa9.22□□□□□ -0.93
RPAIN-209ENST00000571558 DGAT2L7PQ6IED9 249 aa9.22□□□□□ -0.93
RPAIN-209ENST00000571558 AMELXQ99217 191 aa9.22□□□□□ -0.93
RPAIN-209ENST00000571558 RNASE13Q5GAN3 156 aaKnown RBP9.21□□□□□ -0.94
RPAIN-209ENST00000571558 ZC2HC1BQ5TFG8 222 aa9.21□□□□□ -0.94
RPAIN-209ENST00000571558 Q5VSD8 79 aa9.21□□□□□ -0.94
RPAIN-209ENST00000571558 CDPF1Q6NVV7 123 aa9.21□□□□□ -0.94
RPAIN-209ENST00000571558 PRR34Q9NV39 138 aa9.21□□□□□ -0.94
RPAIN-209ENST00000571558 ANGP03950 147 aaKnown RBP9.2□□□□□ -0.94
RPAIN-209ENST00000571558 C3orf79P0CE67 100 aa9.19□□□□□ -0.94
RPAIN-209ENST00000571558 SMCPP49901 116 aaPredicted RBP9.19□□□□□ -0.94
RPAIN-209ENST00000571558 XGP55808 180 aa9.19□□□□□ -0.94
RPAIN-209ENST00000571558 PAPPA-AS1Q5QFB9 102 aa9.19□□□□□ -0.94
RPAIN-209ENST00000571558 Q6ZN92 141 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms