RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 C20orf78Q9BR46 151 aa8.72□□□□□ -1.01
RPAIN-207ENST00000570883 VPS13BQ7Z7G8 4022 aa8.72□□□□□ -1.01
RPAIN-207ENST00000570883 SRRM2Q9UQ35 2752 aaKnown RBP8.72□□□□□ -1.01
RPAIN-207ENST00000570883 FCER1GP30273 86 aa8.71□□□□□ -1.02
RPAIN-207ENST00000570883 RPL32P62910 135 aaKnown RBP8.71□□□□□ -1.02
RPAIN-207ENST00000570883 OR5A1Q8NGJ0 315 aa8.71□□□□□ -1.02
RPAIN-207ENST00000570883 SMIM2Q9BVW6 85 aa8.71□□□□□ -1.02
RPAIN-207ENST00000570883 GAGE12HA6NDE8 117 aa8.7□□□□□ -1.02
RPAIN-207ENST00000570883 CHCHD10Q8WYQ3 142 aaPredicted RBP8.7□□□□□ -1.02
RPAIN-207ENST00000570883 KIR2DL4Q99706 377 aa8.7□□□□□ -1.02
RPAIN-207ENST00000570883 PPBPP02775 128 aa8.69□□□□□ -1.02
RPAIN-207ENST00000570883 SMR3BP02814 79 aaPredicted RBP8.69□□□□□ -1.02
RPAIN-207ENST00000570883 C15orf56Q8N910 161 aa8.69□□□□□ -1.02
RPAIN-207ENST00000570883 TMEM101Q96IK0 257 aa8.69□□□□□ -1.02
RPAIN-207ENST00000570883 BTF3L4Q96K17 158 aa8.69□□□□□ -1.02
RPAIN-207ENST00000570883 CDC42SE2Q9NRR3 84 aa8.69□□□□□ -1.02
RPAIN-207ENST00000570883 UBE2D4Q9Y2X8 147 aa8.69□□□□□ -1.02
RPAIN-207ENST00000570883 LINC00959A0A1B0GUT2 108 aa8.68□□□□□ -1.02
RPAIN-207ENST00000570883 PHOX2AO14813 284 aa8.68□□□□□ -1.02
RPAIN-207ENST00000570883 ORMDL3Q8N138 153 aa8.68□□□□□ -1.02
RPAIN-207ENST00000570883 PRELID3AQ96N28 172 aa8.68□□□□□ -1.02
RPAIN-207ENST00000570883 SEC11CQ9BY50 192 aa8.68□□□□□ -1.02
RPAIN-207ENST00000570883 EPM2AB3EWF7 344 aa8.67□□□□□ -1.02
RPAIN-207ENST00000570883 FOXI1Q12951 378 aa8.67□□□□□ -1.02
RPAIN-207ENST00000570883 Q5VSD8 79 aa8.67□□□□□ -1.02
RPAIN-207ENST00000570883 DGAT2L7PQ6IED9 249 aa8.67□□□□□ -1.02
RPAIN-207ENST00000570883 TMEM136Q6ZRR5 245 aa8.67□□□□□ -1.02
RPAIN-207ENST00000570883 ZNF664Q8N3J9 261 aa8.67□□□□□ -1.02
RPAIN-207ENST00000570883 CLRN3Q8NCR9 226 aa8.67□□□□□ -1.02
RPAIN-207ENST00000570883 hDV102S1A0JD36 115 aa8.66□□□□□ -1.02
RPAIN-207ENST00000570883 SLPIP03973 132 aa8.66□□□□□ -1.02
RPAIN-207ENST00000570883 XCL1P47992 114 aa8.66□□□□□ -1.02
RPAIN-207ENST00000570883 CNBPP62633 177 aaKnown RBP8.66□□□□□ -1.02
RPAIN-207ENST00000570883 RPL39P62891 51 aaKnown RBP8.66□□□□□ -1.02
RPAIN-207ENST00000570883 RNASE13Q5GAN3 156 aaKnown RBP8.66□□□□□ -1.02
RPAIN-207ENST00000570883 C10orf91Q5T1B1 145 aa8.66□□□□□ -1.02
RPAIN-207ENST00000570883 Q6ZUT4 128 aa8.66□□□□□ -1.02
RPAIN-207ENST00000570883 SCXQ7RTU7 201 aa8.66□□□□□ -1.02
RPAIN-207ENST00000570883 C9orf163Q8N9P6 203 aa8.66□□□□□ -1.02
RPAIN-207ENST00000570883 FAM104AQ969W3 186 aa8.66□□□□□ -1.02
RPAIN-207ENST00000570883 IMMP2LQ96T52 175 aa8.66□□□□□ -1.02
RPAIN-207ENST00000570883 CTDSP1Q9GZU7 261 aa8.66□□□□□ -1.02
RPAIN-207ENST00000570883 CSDC2Q9Y534 153 aaKnown RBP8.66□□□□□ -1.02
RPAIN-207ENST00000570883 TCAPO15273 167 aa8.65□□□□□ -1.02
RPAIN-207ENST00000570883 CCL25O15444 150 aa8.65□□□□□ -1.02
RPAIN-207ENST00000570883 TIMM21Q9BVV7 248 aa8.65□□□□□ -1.02
RPAIN-207ENST00000570883 HIGD2BQ4VC39 106 aa8.64□□□□□ -1.03
RPAIN-207ENST00000570883 CARHSP1Q9Y2V2 147 aaKnown RBP8.64□□□□□ -1.03
RPAIN-207ENST00000570883 FLG2Q5D862 2391 aaPredicted RBP8.64□□□□□ -1.03
RPAIN-207ENST00000570883 PRSS47A8MTI9 375 aa8.63□□□□□ -1.03
RPAIN-207ENST00000570883 APOC3P02656 99 aa8.63□□□□□ -1.03
RPAIN-207ENST00000570883 CHAC1Q9BUX1 264 aa8.63□□□□□ -1.03
RPAIN-207ENST00000570883 LAMTOR2Q9Y2Q5 125 aa8.63□□□□□ -1.03
RPAIN-207ENST00000570883 TRAV9-1A0A075B6T8 112 aa8.62□□□□□ -1.03
RPAIN-207ENST00000570883 GVQW2A0A096LPI5 108 aaPredicted RBP8.62□□□□□ -1.03
RPAIN-207ENST00000570883 PANO1I0J062 215 aa8.62□□□□□ -1.03
RPAIN-207ENST00000570883 SMAGPQ0VAQ4 97 aa8.62□□□□□ -1.03
RPAIN-207ENST00000570883 SS18Q15532 418 aa8.62□□□□□ -1.03
RPAIN-207ENST00000570883 SDIM1Q6ZPB5 146 aa8.62□□□□□ -1.03
RPAIN-207ENST00000570883 SVBPQ8N300 66 aa8.62□□□□□ -1.03
RPAIN-207ENST00000570883 CIRBP-AS1Q8TBR5 109 aa8.62□□□□□ -1.03
RPAIN-207ENST00000570883 TMEM18Q96B42 140 aa8.62□□□□□ -1.03
RPAIN-207ENST00000570883 OPRPNQ99935 248 aaPredicted RBP8.62□□□□□ -1.03
RPAIN-207ENST00000570883 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.62□□□□□ -1.03
RPAIN-207ENST00000570883 MYCBP2O75592 4640 aa8.61□□□□□ -1.03
RPAIN-207ENST00000570883 LOC389332A0A1B0GUA5 103 aa8.61□□□□□ -1.03
RPAIN-207ENST00000570883 CFAP161Q6P656 301 aa8.61□□□□□ -1.03
RPAIN-207ENST00000570883 CD164L2Q6UWJ8 174 aa8.61□□□□□ -1.03
RPAIN-207ENST00000570883 MAP1LC3AQ9H492 121 aa8.61□□□□□ -1.03
RPAIN-207ENST00000570883 SPANXA1Q9NS26 97 aa8.61□□□□□ -1.03
RPAIN-207ENST00000570883 AP5S1Q9NUS5 200 aa8.61□□□□□ -1.03
RPAIN-207ENST00000570883 TRAV13-1A0A0B4J241 112 aa8.6□□□□□ -1.03
RPAIN-207ENST00000570883 SNAPINO95295 136 aa8.6□□□□□ -1.03
RPAIN-207ENST00000570883 RAB5AP20339 215 aa8.6□□□□□ -1.03
RPAIN-207ENST00000570883 LINC00528Q8N1L1 170 aa8.6□□□□□ -1.03
RPAIN-207ENST00000570883 Q8N8P6 123 aa8.6□□□□□ -1.03
RPAIN-207ENST00000570883 KRTAP3-3Q9BYR6 98 aa8.6□□□□□ -1.03
RPAIN-207ENST00000570883 KRTAP3-2Q9BYR7 98 aa8.6□□□□□ -1.03
RPAIN-207ENST00000570883 C1orf196B1AJZ1 125 aa8.59□□□□□ -1.03
RPAIN-207ENST00000570883 FAM229AH3BQW9 127 aa8.59□□□□□ -1.03
RPAIN-207ENST00000570883 MRPS36P82909 103 aaKnown RBP8.59□□□□□ -1.03
RPAIN-207ENST00000570883 RHEBQ15382 184 aa8.59□□□□□ -1.03
RPAIN-207ENST00000570883 KIAA1644Q3SXP7 199 aa8.59□□□□□ -1.03
RPAIN-207ENST00000570883 LINC00526Q96FQ7 95 aa8.59□□□□□ -1.03
RPAIN-207ENST00000570883 IGHV3-64A0A075B6Q5 118 aa8.58□□□□□ -1.04
RPAIN-207ENST00000570883 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.58□□□□□ -1.04
RPAIN-207ENST00000570883 IGHV1-58A0A0C4DH39 117 aa8.58□□□□□ -1.04
RPAIN-207ENST00000570883 S100PP25815 95 aa8.58□□□□□ -1.04
RPAIN-207ENST00000570883 CIRBPQ14011 172 aaKnown RBP8.58□□□□□ -1.04
RPAIN-207ENST00000570883 RPS10P5Q9NQ39 176 aa8.58□□□□□ -1.04
RPAIN-207ENST00000570883 CHTF8P0CG12 524 aa8.57□□□□□ -1.04
RPAIN-207ENST00000570883 IGLV4-3A0A075B6K6 122 aa8.56□□□□□ -1.04
RPAIN-207ENST00000570883 IFITM10A6NMD0 228 aa8.56□□□□□ -1.04
RPAIN-207ENST00000570883 COX7A2LO14548 114 aa8.56□□□□□ -1.04
RPAIN-207ENST00000570883 INAFM2P0DMQ5 153 aa8.56□□□□□ -1.04
RPAIN-207ENST00000570883 IFI27P40305 119 aaPredicted RBP8.56□□□□□ -1.04
RPAIN-207ENST00000570883 GNB1LQ9BYB4 327 aa8.56□□□□□ -1.04
RPAIN-207ENST00000570883 PYGO1Q9Y3Y4 419 aa8.56□□□□□ -1.04
RPAIN-207ENST00000570883 KRTAP10-4P60372 401 aaPredicted RBP8.55□□□□□ -1.04
RPAIN-207ENST00000570883 C2orf66Q6UXQ4 117 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms