RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 CDC42SE2Q9NRR3 84 aa3.46□□□□□ -1.86
CHD3-212ENST00000570758 NAT8BQ9UHF3 227 aa3.46□□□□□ -1.86
CHD3-212ENST00000570758 C7orf77A4D0Y5 90 aa3.45□□□□□ -1.86
CHD3-212ENST00000570758 VCYO14598 125 aa3.45□□□□□ -1.86
CHD3-212ENST00000570758 CCL25O15444 150 aa3.45□□□□□ -1.86
CHD3-212ENST00000570758 XCL1P47992 114 aa3.45□□□□□ -1.86
CHD3-212ENST00000570758 SUMO2P61956 95 aaKnown RBP3.45□□□□□ -1.86
CHD3-212ENST00000570758 CIRBPQ14011 172 aaKnown RBP3.45□□□□□ -1.86
CHD3-212ENST00000570758 CFAP161Q6P656 301 aa3.45□□□□□ -1.86
CHD3-212ENST00000570758 MRPL52Q86TS9 123 aaKnown RBP3.45□□□□□ -1.86
CHD3-212ENST00000570758 TMEM101Q96IK0 257 aa3.45□□□□□ -1.86
CHD3-212ENST00000570758 BTF3L4Q96K17 158 aa3.45□□□□□ -1.86
CHD3-212ENST00000570758 AP5S1Q9NUS5 200 aa3.45□□□□□ -1.86
CHD3-212ENST00000570758 FAT3Q8TDW7 4589 aa3.44□□□□□ -1.86
CHD3-212ENST00000570758 GVQW2A0A096LPI5 108 aaPredicted RBP3.44□□□□□ -1.86
CHD3-212ENST00000570758 A0A1B0GW15 77 aa3.44□□□□□ -1.86
CHD3-212ENST00000570758 PPP1R2P9O14990 202 aa3.44□□□□□ -1.86
CHD3-212ENST00000570758 PPP1R17O96001 155 aa3.44□□□□□ -1.86
CHD3-212ENST00000570758 FCER1GP30273 86 aa3.44□□□□□ -1.86
CHD3-212ENST00000570758 CKS2P33552 79 aa3.44□□□□□ -1.86
CHD3-212ENST00000570758 HNRNPA3P51991 378 aaKnown RBP3.44□□□□□ -1.86
CHD3-212ENST00000570758 RPL37AP61513 92 aaKnown RBP3.44□□□□□ -1.86
CHD3-212ENST00000570758 HBBP68871 147 aa3.44□□□□□ -1.86
CHD3-212ENST00000570758 RNASE13Q5GAN3 156 aaKnown RBP3.44□□□□□ -1.86
CHD3-212ENST00000570758 Q6ZUT4 128 aa3.44□□□□□ -1.86
CHD3-212ENST00000570758 ZNF664Q8N3J9 261 aa3.44□□□□□ -1.86
CHD3-212ENST00000570758 SPACA4Q8TDM5 124 aa3.44□□□□□ -1.86
CHD3-212ENST00000570758 LINC00526Q96FQ7 95 aa3.44□□□□□ -1.86
CHD3-212ENST00000570758 C20orf78Q9BR46 151 aa3.44□□□□□ -1.86
CHD3-212ENST00000570758 UBE2D4Q9Y2X8 147 aa3.44□□□□□ -1.86
CHD3-212ENST00000570758 HERC1Q15751 4861 aa3.44□□□□□ -1.86
CHD3-212ENST00000570758 TRBV24-1A0A075B6N3 115 aa3.43□□□□□ -1.86
CHD3-212ENST00000570758 A0A087WYN8 130 aa3.43□□□□□ -1.86
CHD3-212ENST00000570758 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.43□□□□□ -1.86
CHD3-212ENST00000570758 IGHV1-58A0A0C4DH39 117 aa3.43□□□□□ -1.86
CHD3-212ENST00000570758 LINC00862A6NCI5 91 aa3.43□□□□□ -1.86
CHD3-212ENST00000570758 KRTAP29-1A8MX34 341 aaPredicted RBP3.43□□□□□ -1.86
CHD3-212ENST00000570758 D6R8Y8 96 aa3.43□□□□□ -1.86
CHD3-212ENST00000570758 F8W036 122 aa3.43□□□□□ -1.86
CHD3-212ENST00000570758 J3QL48 77 aa3.43□□□□□ -1.86
CHD3-212ENST00000570758 TCAPO15273 167 aa3.43□□□□□ -1.86
CHD3-212ENST00000570758 TNFRSF6BO95407 300 aa3.43□□□□□ -1.86
CHD3-212ENST00000570758 NPYP01303 97 aa3.43□□□□□ -1.86
CHD3-212ENST00000570758 S100A8P05109 93 aa3.43□□□□□ -1.86
CHD3-212ENST00000570758 RPL39P62891 51 aaKnown RBP3.43□□□□□ -1.86
CHD3-212ENST00000570758 RPL32P62910 135 aaKnown RBP3.43□□□□□ -1.86
CHD3-212ENST00000570758 COX6A2Q02221 97 aa3.43□□□□□ -1.86
CHD3-212ENST00000570758 SS18Q15532 418 aa3.43□□□□□ -1.86
CHD3-212ENST00000570758 CD164L2Q6UWJ8 174 aa3.43□□□□□ -1.86
CHD3-212ENST00000570758 PRSS3P2Q8NHM4 247 aa3.43□□□□□ -1.86
CHD3-212ENST00000570758 FAM104AQ969W3 186 aa3.43□□□□□ -1.86
CHD3-212ENST00000570758 KIR2DL4Q99706 377 aa3.43□□□□□ -1.86
CHD3-212ENST00000570758 TIMM21Q9BVV7 248 aa3.43□□□□□ -1.86
CHD3-212ENST00000570758 SMIM2Q9BVW6 85 aa3.43□□□□□ -1.86
CHD3-212ENST00000570758 PLAC8Q9NZF1 115 aa3.43□□□□□ -1.86
CHD3-212ENST00000570758 CSDC2Q9Y534 153 aaKnown RBP3.43□□□□□ -1.86
CHD3-212ENST00000570758 TRAV13-1A0A0B4J241 112 aa3.42□□□□□ -1.86
CHD3-212ENST00000570758 IGKV2-24A0A0C4DH68 120 aa3.42□□□□□ -1.86
CHD3-212ENST00000570758 RAB14P61106 215 aa3.42□□□□□ -1.86
CHD3-212ENST00000570758 IFITM2Q01629 132 aa3.42□□□□□ -1.86
CHD3-212ENST00000570758 CLLU1Q5K131 121 aa3.42□□□□□ -1.86
CHD3-212ENST00000570758 ATP5L2Q7Z4Y8 100 aa3.42□□□□□ -1.86
CHD3-212ENST00000570758 DPH3Q96FX2 82 aa3.42□□□□□ -1.86
CHD3-212ENST00000570758 OPRPNQ99935 248 aaPredicted RBP3.42□□□□□ -1.86
CHD3-212ENST00000570758 LRP1Q07954 4544 aaKnown RBP3.42□□□□□ -1.86
CHD3-212ENST00000570758 SRRM2Q9UQ35 2752 aaKnown RBP3.41□□□□□ -1.86
CHD3-212ENST00000570758 A0A096LNI7 61 aa3.41□□□□□ -1.86
CHD3-212ENST00000570758 C1orf196B1AJZ1 125 aa3.41□□□□□ -1.86
CHD3-212ENST00000570758 PHOX2AO14813 284 aa3.41□□□□□ -1.86
CHD3-212ENST00000570758 PPBPP02775 128 aa3.41□□□□□ -1.86
CHD3-212ENST00000570758 MT-ND4LP03901 98 aa3.41□□□□□ -1.86
CHD3-212ENST00000570758 SYCNQ0VAF6 134 aa3.41□□□□□ -1.86
CHD3-212ENST00000570758 PNRC1Q12796 327 aaPredicted RBP3.41□□□□□ -1.86
CHD3-212ENST00000570758 MAJINQ3KP22 176 aa3.41□□□□□ -1.86
CHD3-212ENST00000570758 C5orf38Q86SI9 138 aa3.41□□□□□ -1.86
CHD3-212ENST00000570758 ORMDL3Q8N138 153 aa3.41□□□□□ -1.86
CHD3-212ENST00000570758 TMEM18Q96B42 140 aa3.41□□□□□ -1.86
CHD3-212ENST00000570758 ANAPC16Q96DE5 110 aa3.41□□□□□ -1.86
CHD3-212ENST00000570758 CARD19Q96LW7 228 aa3.41□□□□□ -1.86
CHD3-212ENST00000570758 PRELID3AQ96N28 172 aa3.41□□□□□ -1.86
CHD3-212ENST00000570758 DMBT1Q9UGM3 2413 aaPredicted RBP3.4□□□□□ -1.86
CHD3-212ENST00000570758 IGLV4-69A0A075B6H9 119 aa3.4□□□□□ -1.87
CHD3-212ENST00000570758 LOC389332A0A1B0GUA5 103 aa3.4□□□□□ -1.87
CHD3-212ENST00000570758 ZNF561-AS1K7EIQ3 104 aa3.4□□□□□ -1.87
CHD3-212ENST00000570758 COX7A2LO14548 114 aa3.4□□□□□ -1.87
CHD3-212ENST00000570758 OXTP01178 125 aa3.4□□□□□ -1.87
CHD3-212ENST00000570758 ADCYAP1P18509 176 aa3.4□□□□□ -1.87
CHD3-212ENST00000570758 MALP21145 153 aa3.4□□□□□ -1.87
CHD3-212ENST00000570758 MRPS36P82909 103 aaKnown RBP3.4□□□□□ -1.87
CHD3-212ENST00000570758 SMAGPQ0VAQ4 97 aa3.4□□□□□ -1.87
CHD3-212ENST00000570758 TMEM136Q6ZRR5 245 aa3.4□□□□□ -1.87
CHD3-212ENST00000570758 Q6ZRU5 148 aa3.4□□□□□ -1.87
CHD3-212ENST00000570758 STPG4Q8N801 248 aa3.4□□□□□ -1.87
CHD3-212ENST00000570758 SPANXA1Q9NS26 97 aa3.4□□□□□ -1.87
CHD3-212ENST00000570758 IGLV4-3A0A075B6K6 122 aa3.39□□□□□ -1.87
CHD3-212ENST00000570758 A0A0J9YXV3 536 aa3.39□□□□□ -1.87
CHD3-212ENST00000570758 TMEM218A2RU14 115 aa3.39□□□□□ -1.87
CHD3-212ENST00000570758 PRSS47A8MTI9 375 aa3.39□□□□□ -1.87
CHD3-212ENST00000570758 SPAG11BQ08648 103 aa3.39□□□□□ -1.87
CHD3-212ENST00000570758 ZC2HC1BQ5TFG8 222 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms