RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 CLRN3Q8NCR9 226 aa8.85□□□□□ -0.99
GTF3C1-211ENST00000569653 C7orf77A4D0Y5 90 aa8.84□□□□□ -0.99
GTF3C1-211ENST00000569653 RPS10P46783 165 aaKnown RBP8.84□□□□□ -0.99
GTF3C1-211ENST00000569653 CIRBPQ14011 172 aaKnown RBP8.84□□□□□ -0.99
GTF3C1-211ENST00000569653 FAM104BQ5XKR9 115 aa8.84□□□□□ -0.99
GTF3C1-211ENST00000569653 AMMECR1LQ6DCA0 310 aa8.84□□□□□ -0.99
GTF3C1-211ENST00000569653 MRPL54Q6P161 138 aaKnown RBP8.84□□□□□ -0.99
GTF3C1-211ENST00000569653 TRAV8-4A0A0B4J246 113 aa8.83□□□□□ -1
GTF3C1-211ENST00000569653 TRBV27A0A0K0K1C4 114 aa8.83□□□□□ -1
GTF3C1-211ENST00000569653 SMKR1H3BMG3 65 aa8.83□□□□□ -1
GTF3C1-211ENST00000569653 CHTF8P0CG12 524 aa8.83□□□□□ -1
GTF3C1-211ENST00000569653 RPL37AP61513 92 aaKnown RBP8.83□□□□□ -1
GTF3C1-211ENST00000569653 CNBPP62633 177 aaKnown RBP8.83□□□□□ -1
GTF3C1-211ENST00000569653 MRPL51Q4U2R6 128 aaKnown RBP8.83□□□□□ -1
GTF3C1-211ENST00000569653 ATP5L2Q7Z4Y8 100 aa8.83□□□□□ -1
GTF3C1-211ENST00000569653 CTDSP1Q9GZU7 261 aa8.83□□□□□ -1
GTF3C1-211ENST00000569653 TMEM242Q9NWH2 141 aa8.83□□□□□ -1
GTF3C1-211ENST00000569653 UBR4Q5T4S7 5183 aa8.83□□□□□ -1
GTF3C1-211ENST00000569653 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.82□□□□□ -1
GTF3C1-211ENST00000569653 IGKV2-29A2NJV5 120 aaPredicted RBP8.82□□□□□ -1
GTF3C1-211ENST00000569653 TSHBP01222 138 aa8.82□□□□□ -1
GTF3C1-211ENST00000569653 APOC3P02656 99 aa8.82□□□□□ -1
GTF3C1-211ENST00000569653 ZNF25P17030 456 aaPredicted RBP8.82□□□□□ -1
GTF3C1-211ENST00000569653 POLR2KP53803 58 aaKnown RBP8.82□□□□□ -1
GTF3C1-211ENST00000569653 C15orf56Q8N910 161 aa8.82□□□□□ -1
GTF3C1-211ENST00000569653 NRACQ8N912 160 aa8.82□□□□□ -1
GTF3C1-211ENST00000569653 IMMP2LQ96T52 175 aa8.82□□□□□ -1
GTF3C1-211ENST00000569653 hDV102S1A0JD36 115 aa8.81□□□□□ -1
GTF3C1-211ENST00000569653 VCYO14598 125 aa8.81□□□□□ -1
GTF3C1-211ENST00000569653 OXTP01178 125 aa8.81□□□□□ -1
GTF3C1-211ENST00000569653 FGF6P10767 208 aa8.81□□□□□ -1
GTF3C1-211ENST00000569653 SUMO2P61956 95 aaKnown RBP8.81□□□□□ -1
GTF3C1-211ENST00000569653 RNASEKQ6P5S7 137 aaKnown RBP8.81□□□□□ -1
GTF3C1-211ENST00000569653 MT1HL1P0DM35 61 aa8.8□□□□□ -1
GTF3C1-211ENST00000569653 ESDP10768 282 aa8.8□□□□□ -1
GTF3C1-211ENST00000569653 FCER1GP30273 86 aa8.8□□□□□ -1
GTF3C1-211ENST00000569653 CKS2P33552 79 aa8.8□□□□□ -1
GTF3C1-211ENST00000569653 RHEBQ15382 184 aa8.8□□□□□ -1
GTF3C1-211ENST00000569653 TMEM101Q96IK0 257 aa8.8□□□□□ -1
GTF3C1-211ENST00000569653 BTF3L4Q96K17 158 aa8.8□□□□□ -1
GTF3C1-211ENST00000569653 KIR2DL4Q99706 377 aa8.8□□□□□ -1
GTF3C1-211ENST00000569653 RPS10P5Q9NQ39 176 aa8.8□□□□□ -1
GTF3C1-211ENST00000569653 C20orf78Q9BR46 151 aa8.79□□□□□ -1
GTF3C1-211ENST00000569653 TRBV24-1A0A075B6N3 115 aa8.78□□□□□ -1
GTF3C1-211ENST00000569653 GAGE12HA6NDE8 117 aa8.78□□□□□ -1
GTF3C1-211ENST00000569653 D6R8Y8 96 aa8.78□□□□□ -1
GTF3C1-211ENST00000569653 TCAPO15273 167 aa8.78□□□□□ -1
GTF3C1-211ENST00000569653 PPBPP02775 128 aa8.78□□□□□ -1
GTF3C1-211ENST00000569653 SMAGPQ0VAQ4 97 aa8.78□□□□□ -1
GTF3C1-211ENST00000569653 SVBPQ8N300 66 aa8.78□□□□□ -1
GTF3C1-211ENST00000569653 OR5A1Q8NGJ0 315 aa8.78□□□□□ -1
GTF3C1-211ENST00000569653 SPACA4Q8TDM5 124 aa8.78□□□□□ -1
GTF3C1-211ENST00000569653 TNXBP22105 4242 aa8.77□□□□□ -1.01
GTF3C1-211ENST00000569653 A0A087WYN8 130 aa8.77□□□□□ -1.01
GTF3C1-211ENST00000569653 IGKV3OR2-268A0A0C4DH90 116 aa8.77□□□□□ -1.01
GTF3C1-211ENST00000569653 TNFRSF6BO95407 300 aa8.77□□□□□ -1.01
GTF3C1-211ENST00000569653 RPL32P62910 135 aaKnown RBP8.77□□□□□ -1.01
GTF3C1-211ENST00000569653 MRPL52Q86TS9 123 aaKnown RBP8.77□□□□□ -1.01
GTF3C1-211ENST00000569653 PHOX2AO14813 284 aa8.76□□□□□ -1.01
GTF3C1-211ENST00000569653 SNAPINO95295 136 aa8.76□□□□□ -1.01
GTF3C1-211ENST00000569653 NDUFA5Q16718 116 aa8.76□□□□□ -1.01
GTF3C1-211ENST00000569653 HIGD2BQ4VC39 106 aa8.76□□□□□ -1.01
GTF3C1-211ENST00000569653 TMEM136Q6ZRR5 245 aa8.76□□□□□ -1.01
GTF3C1-211ENST00000569653 ORMDL3Q8N138 153 aa8.76□□□□□ -1.01
GTF3C1-211ENST00000569653 SMIM2Q9BVW6 85 aa8.76□□□□□ -1.01
GTF3C1-211ENST00000569653 IGHV3-64A0A075B6Q5 118 aa8.75□□□□□ -1.01
GTF3C1-211ENST00000569653 TRAV9-1A0A075B6T8 112 aa8.75□□□□□ -1.01
GTF3C1-211ENST00000569653 TMEM18Q96B42 140 aa8.75□□□□□ -1.01
GTF3C1-211ENST00000569653 NPYP01303 97 aa8.74□□□□□ -1.01
GTF3C1-211ENST00000569653 FOXI1Q12951 378 aa8.74□□□□□ -1.01
GTF3C1-211ENST00000569653 CHCHD10Q8WYQ3 142 aaPredicted RBP8.74□□□□□ -1.01
GTF3C1-211ENST00000569653 YPEL4Q96NS1 127 aa8.74□□□□□ -1.01
GTF3C1-211ENST00000569653 TGIF2-C20orf24A0A0A6YYL0 155 aa8.73□□□□□ -1.01
GTF3C1-211ENST00000569653 S100PP25815 95 aa8.73□□□□□ -1.01
GTF3C1-211ENST00000569653 COX6A2Q02221 97 aa8.73□□□□□ -1.01
GTF3C1-211ENST00000569653 SERTAD4-AS1Q5TG53 156 aa8.73□□□□□ -1.01
GTF3C1-211ENST00000569653 ZNF664Q8N3J9 261 aa8.73□□□□□ -1.01
GTF3C1-211ENST00000569653 PRSS3P2Q8NHM4 247 aa8.73□□□□□ -1.01
GTF3C1-211ENST00000569653 PRELID3AQ96N28 172 aa8.73□□□□□ -1.01
GTF3C1-211ENST00000569653 CDC42SE2Q9NRR3 84 aa8.73□□□□□ -1.01
GTF3C1-211ENST00000569653 PLAC8Q9NZF1 115 aa8.73□□□□□ -1.01
GTF3C1-211ENST00000569653 LAMTOR2Q9Y2Q5 125 aa8.73□□□□□ -1.01
GTF3C1-211ENST00000569653 CSDC2Q9Y534 153 aaKnown RBP8.73□□□□□ -1.01
GTF3C1-211ENST00000569653 GVQW2A0A096LPI5 108 aaPredicted RBP8.72□□□□□ -1.01
GTF3C1-211ENST00000569653 CFAP161Q6P656 301 aa8.72□□□□□ -1.01
GTF3C1-211ENST00000569653 AP5S1Q9NUS5 200 aa8.72□□□□□ -1.01
GTF3C1-211ENST00000569653 UBE2D4Q9Y2X8 147 aa8.72□□□□□ -1.01
GTF3C1-211ENST00000569653 LINC00959A0A1B0GUT2 108 aa8.71□□□□□ -1.02
GTF3C1-211ENST00000569653 SS18Q15532 418 aa8.71□□□□□ -1.02
GTF3C1-211ENST00000569653 LINC00526Q96FQ7 95 aa8.71□□□□□ -1.02
GTF3C1-211ENST00000569653 TIMM21Q9BVV7 248 aa8.71□□□□□ -1.02
GTF3C1-211ENST00000569653 GNB1LQ9BYB4 327 aa8.71□□□□□ -1.02
GTF3C1-211ENST00000569653 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.7□□□□□ -1.02
GTF3C1-211ENST00000569653 CCL25O15444 150 aa8.7□□□□□ -1.02
GTF3C1-211ENST00000569653 RAB5AP20339 215 aa8.7□□□□□ -1.02
GTF3C1-211ENST00000569653 XCL1P47992 114 aa8.7□□□□□ -1.02
GTF3C1-211ENST00000569653 MAP1LC3AQ9H492 121 aa8.7□□□□□ -1.02
GTF3C1-211ENST00000569653 PLA2G2DQ9UNK4 145 aa8.7□□□□□ -1.02
GTF3C1-211ENST00000569653 A0A096LNI7 61 aa8.69□□□□□ -1.02
GTF3C1-211ENST00000569653 IGKV2-24A0A0C4DH68 120 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms