RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 H3BNG1 76 aa5.34□□□□□ -1.55
CDH13-214ENST00000569455 IGKCP01834 107 aa5.34□□□□□ -1.55
CDH13-214ENST00000569455 PLNP26678 52 aa5.34□□□□□ -1.55
CDH13-214ENST00000569455 PKIAP61925 76 aa5.34□□□□□ -1.55
CDH13-214ENST00000569455 LCE2DQ5TA82 110 aaPredicted RBP5.34□□□□□ -1.55
CDH13-214ENST00000569455 AMMECR1LQ6DCA0 310 aa5.34□□□□□ -1.55
CDH13-214ENST00000569455 TMEM101Q96IK0 257 aa5.34□□□□□ -1.55
CDH13-214ENST00000569455 VSIG2Q96IQ7 327 aa5.34□□□□□ -1.55
CDH13-214ENST00000569455 PMCHL2Q9BQD1 86 aa5.34□□□□□ -1.55
CDH13-214ENST00000569455 VCX2Q9H322 139 aa5.34□□□□□ -1.55
CDH13-214ENST00000569455 UBE2D4Q9Y2X8 147 aa5.34□□□□□ -1.55
CDH13-214ENST00000569455 PAM16Q9Y3D7 125 aa5.34□□□□□ -1.55
CDH13-214ENST00000569455 IGLV4-3A0A075B6K6 122 aa5.33□□□□□ -1.56
CDH13-214ENST00000569455 FGF6P10767 208 aa5.33□□□□□ -1.56
CDH13-214ENST00000569455 ZNF25P17030 456 aaPredicted RBP5.33□□□□□ -1.56
CDH13-214ENST00000569455 MRPS36P82909 103 aaKnown RBP5.33□□□□□ -1.56
CDH13-214ENST00000569455 SPATA45Q537H7 98 aa5.33□□□□□ -1.56
CDH13-214ENST00000569455 NTM-AS1Q6ZSK4 140 aa5.33□□□□□ -1.56
CDH13-214ENST00000569455 Q6ZTC4 211 aa5.33□□□□□ -1.56
CDH13-214ENST00000569455 MRPL52Q86TS9 123 aaKnown RBP5.33□□□□□ -1.56
CDH13-214ENST00000569455 ZNF664Q8N3J9 261 aa5.33□□□□□ -1.56
CDH13-214ENST00000569455 OR5A1Q8NGJ0 315 aa5.33□□□□□ -1.56
CDH13-214ENST00000569455 C2orf88Q9BSF0 95 aa5.33□□□□□ -1.56
CDH13-214ENST00000569455 CHCHD5Q9BSY4 110 aa5.33□□□□□ -1.56
CDH13-214ENST00000569455 CST9LQ9H4G1 147 aa5.33□□□□□ -1.56
CDH13-214ENST00000569455 MRPL35Q9NZE8 188 aaKnown RBP5.33□□□□□ -1.56
CDH13-214ENST00000569455 CSDC2Q9Y534 153 aaKnown RBP5.33□□□□□ -1.56
CDH13-214ENST00000569455 TENM2Q9NT68 2774 aa5.33□□□□□ -1.56
CDH13-214ENST00000569455 HERC2O95714 4834 aa5.32□□□□□ -1.56
CDH13-214ENST00000569455 DEFB131BA0A096LNP1 70 aa5.32□□□□□ -1.56
CDH13-214ENST00000569455 TRAV10A0A0B4J240 114 aa5.32□□□□□ -1.56
CDH13-214ENST00000569455 NANOS2P60321 138 aaKnown RBP5.32□□□□□ -1.56
CDH13-214ENST00000569455 hDV102S1A0JD36 115 aa5.31□□□□□ -1.56
CDH13-214ENST00000569455 PCP4L1A6NKN8 68 aa5.31□□□□□ -1.56
CDH13-214ENST00000569455 C3orf84H3BNL1 204 aa5.31□□□□□ -1.56
CDH13-214ENST00000569455 CEMP1Q6PRD7 247 aaPredicted RBP5.31□□□□□ -1.56
CDH13-214ENST00000569455 AMELXQ99217 191 aa5.31□□□□□ -1.56
CDH13-214ENST00000569455 OPRPNQ99935 248 aaPredicted RBP5.31□□□□□ -1.56
CDH13-214ENST00000569455 PRO1933Q9H354 126 aa5.31□□□□□ -1.56
CDH13-214ENST00000569455 RYR1P21817 5038 aa5.31□□□□□ -1.56
CDH13-214ENST00000569455 A0A096LPF7 62 aa5.3□□□□□ -1.56
CDH13-214ENST00000569455 TIRAPP58753 221 aa5.3□□□□□ -1.56
CDH13-214ENST00000569455 SEC11AP67812 179 aa5.3□□□□□ -1.56
CDH13-214ENST00000569455 GAGE6Q13070 117 aa5.3□□□□□ -1.56
CDH13-214ENST00000569455 MAJINQ3KP22 176 aa5.3□□□□□ -1.56
CDH13-214ENST00000569455 LELP1Q5T871 98 aa5.3□□□□□ -1.56
CDH13-214ENST00000569455 ZC2HC1BQ5TFG8 222 aa5.3□□□□□ -1.56
CDH13-214ENST00000569455 Q6ZUT4 128 aa5.3□□□□□ -1.56
CDH13-214ENST00000569455 UQCR10Q9UDW1 63 aa5.3□□□□□ -1.56
CDH13-214ENST00000569455 CSMD3Q7Z407 3707 aa5.3□□□□□ -1.56
CDH13-214ENST00000569455 IGLV4-69A0A075B6H9 119 aa5.29□□□□□ -1.56
CDH13-214ENST00000569455 TRAV8-6A0A0B4J262 113 aa5.29□□□□□ -1.56
CDH13-214ENST00000569455 A0A1B0GUV1 79 aa5.29□□□□□ -1.56
CDH13-214ENST00000569455 C11orf86A6NJI1 115 aa5.29□□□□□ -1.56
CDH13-214ENST00000569455 TMEM262E9PQX1 116 aa5.29□□□□□ -1.56
CDH13-214ENST00000569455 IGLC3P0DOY3 106 aa5.29□□□□□ -1.56
CDH13-214ENST00000569455 HERVK_113P61574 105 aa5.29□□□□□ -1.56
CDH13-214ENST00000569455 NFE4Q86UQ8 179 aa5.29□□□□□ -1.56
CDH13-214ENST00000569455 STPG4Q8N801 248 aa5.29□□□□□ -1.56
CDH13-214ENST00000569455 C15orf53Q8NAA6 179 aa5.29□□□□□ -1.56
CDH13-214ENST00000569455 CHAC1Q9BUX1 264 aa5.29□□□□□ -1.56
CDH13-214ENST00000569455 CDC42SE2Q9NRR3 84 aa5.29□□□□□ -1.56
CDH13-214ENST00000569455 LYSTQ99698 3801 aa5.28□□□□□ -1.56
CDH13-214ENST00000569455 A0A0J9YXV3 536 aa5.28□□□□□ -1.56
CDH13-214ENST00000569455 LCE6AA0A183 80 aa5.28□□□□□ -1.56
CDH13-214ENST00000569455 DDTP30046 118 aa5.28□□□□□ -1.56
CDH13-214ENST00000569455 ANKRD39Q53RE8 183 aa5.28□□□□□ -1.56
CDH13-214ENST00000569455 RNASE13Q5GAN3 156 aaKnown RBP5.28□□□□□ -1.56
CDH13-214ENST00000569455 TMEM170BQ5T4T1 132 aa5.28□□□□□ -1.56
CDH13-214ENST00000569455 LYPD5Q6UWN5 251 aa5.28□□□□□ -1.56
CDH13-214ENST00000569455 FAM104AQ969W3 186 aa5.28□□□□□ -1.56
CDH13-214ENST00000569455 MIEN1Q9BRT3 115 aa5.28□□□□□ -1.56
CDH13-214ENST00000569455 GEMIN7Q9H840 131 aaKnown RBP5.28□□□□□ -1.56
CDH13-214ENST00000569455 TINCRA0A1B0GVN0 87 aa5.27□□□□□ -1.57
CDH13-214ENST00000569455 H3BRM9 83 aa5.27□□□□□ -1.57
CDH13-214ENST00000569455 COX8AP10176 69 aa5.27□□□□□ -1.57
CDH13-214ENST00000569455 NMUP48645 174 aa5.27□□□□□ -1.57
CDH13-214ENST00000569455 UBE2D1P51668 147 aa5.27□□□□□ -1.57
CDH13-214ENST00000569455 RBX1P62877 108 aa5.27□□□□□ -1.57
CDH13-214ENST00000569455 HERVK_113P63121 156 aa5.27□□□□□ -1.57
CDH13-214ENST00000569455 SLC25A34Q6PIV7 304 aa5.27□□□□□ -1.57
CDH13-214ENST00000569455 FAM19A3Q7Z5A8 133 aa5.27□□□□□ -1.57
CDH13-214ENST00000569455 MUC7Q8TAX7 377 aa5.27□□□□□ -1.57
CDH13-214ENST00000569455 C14orf144Q96I85 54 aa5.27□□□□□ -1.57
CDH13-214ENST00000569455 TRAV13-1A0A0B4J241 112 aa5.26□□□□□ -1.57
CDH13-214ENST00000569455 E9PLD3 99 aa5.26□□□□□ -1.57
CDH13-214ENST00000569455 HNRNPA3P51991 378 aaKnown RBP5.26□□□□□ -1.57
CDH13-214ENST00000569455 MPV17L2Q567V2 206 aa5.26□□□□□ -1.57
CDH13-214ENST00000569455 CASC10Q5T4H9 136 aa5.26□□□□□ -1.57
CDH13-214ENST00000569455 IGLV4-60A0A075B6I1 120 aa5.25□□□□□ -1.57
CDH13-214ENST00000569455 IGLV5-45A0A087WSX0 123 aa5.25□□□□□ -1.57
CDH13-214ENST00000569455 CCL25O15444 150 aa5.25□□□□□ -1.57
CDH13-214ENST00000569455 DLEU1O43261 78 aa5.25□□□□□ -1.57
CDH13-214ENST00000569455 ZNF22P17026 224 aaPredicted RBP5.25□□□□□ -1.57
CDH13-214ENST00000569455 TCTAP57738 103 aa5.25□□□□□ -1.57
CDH13-214ENST00000569455 SS18Q15532 418 aa5.25□□□□□ -1.57
CDH13-214ENST00000569455 BOD1L2Q8IYS8 172 aa5.25□□□□□ -1.57
CDH13-214ENST00000569455 LINC00469Q8N7U9 141 aa5.25□□□□□ -1.57
CDH13-214ENST00000569455 IGKV2D-26A0A0A0MRZ7 120 aa5.24□□□□□ -1.57
CDH13-214ENST00000569455 IGKV3OR2-268A0A0C4DH90 116 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms