RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 HBBP68871 147 aa11.31□□□□□ -0.6
EDC3-215ENST00000569007 LINC00862A6NCI5 91 aa11.3□□□□□ -0.6
EDC3-215ENST00000569007 PPP1R2P9O14990 202 aa11.3□□□□□ -0.6
EDC3-215ENST00000569007 MRPL52Q86TS9 123 aaKnown RBP11.3□□□□□ -0.6
EDC3-215ENST00000569007 C15orf56Q8N910 161 aa11.3□□□□□ -0.6
EDC3-215ENST00000569007 AP5S1Q9NUS5 200 aa11.3□□□□□ -0.6
EDC3-215ENST00000569007 F8W036 122 aa11.29□□□□□ -0.6
EDC3-215ENST00000569007 SLPIP03973 132 aa11.29□□□□□ -0.6
EDC3-215ENST00000569007 CFAP161Q6P656 301 aa11.29□□□□□ -0.6
EDC3-215ENST00000569007 KIR2DL4Q99706 377 aa11.29□□□□□ -0.6
EDC3-215ENST00000569007 CDC42SE2Q9NRR3 84 aa11.29□□□□□ -0.6
EDC3-215ENST00000569007 DMBT1Q9UGM3 2413 aaPredicted RBP11.29□□□□□ -0.6
EDC3-215ENST00000569007 TRBV24-1A0A075B6N3 115 aa11.28□□□□□ -0.6
EDC3-215ENST00000569007 LINC00959A0A1B0GUT2 108 aa11.28□□□□□ -0.6
EDC3-215ENST00000569007 PLA2G1BP04054 148 aaKnown RBP11.28□□□□□ -0.6
EDC3-215ENST00000569007 XCL1P47992 114 aa11.28□□□□□ -0.6
EDC3-215ENST00000569007 PNRC1Q12796 327 aaPredicted RBP11.28□□□□□ -0.6
EDC3-215ENST00000569007 CLLU1Q5K131 121 aa11.28□□□□□ -0.6
EDC3-215ENST00000569007 SDIM1Q6ZPB5 146 aa11.28□□□□□ -0.6
EDC3-215ENST00000569007 C20orf78Q9BR46 151 aa11.28□□□□□ -0.6
EDC3-215ENST00000569007 D6R8Y8 96 aa11.27□□□□□ -0.61
EDC3-215ENST00000569007 TNFRSF6BO95407 300 aa11.27□□□□□ -0.61
EDC3-215ENST00000569007 FOXI1Q12951 378 aa11.27□□□□□ -0.61
EDC3-215ENST00000569007 ZNF664Q8N3J9 261 aa11.27□□□□□ -0.61
EDC3-215ENST00000569007 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.26□□□□□ -0.61
EDC3-215ENST00000569007 CCL25O15444 150 aa11.26□□□□□ -0.61
EDC3-215ENST00000569007 MT-ND4LP03901 98 aa11.26□□□□□ -0.61
EDC3-215ENST00000569007 RPL32P62910 135 aaKnown RBP11.26□□□□□ -0.61
EDC3-215ENST00000569007 HIGD2BQ4VC39 106 aa11.26□□□□□ -0.61
EDC3-215ENST00000569007 ATP5L2Q7Z4Y8 100 aa11.26□□□□□ -0.61
EDC3-215ENST00000569007 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.26□□□□□ -0.61
EDC3-215ENST00000569007 PANO1I0J062 215 aa11.25□□□□□ -0.61
EDC3-215ENST00000569007 UBE2D4Q9Y2X8 147 aa11.25□□□□□ -0.61
EDC3-215ENST00000569007 IGHV3-64A0A075B6Q5 118 aa11.24□□□□□ -0.61
EDC3-215ENST00000569007 NPYP01303 97 aa11.24□□□□□ -0.61
EDC3-215ENST00000569007 PPBPP02775 128 aa11.24□□□□□ -0.61
EDC3-215ENST00000569007 SS18Q15532 418 aa11.24□□□□□ -0.61
EDC3-215ENST00000569007 ANAPC16Q96DE5 110 aa11.24□□□□□ -0.61
EDC3-215ENST00000569007 SMIM2Q9BVW6 85 aa11.24□□□□□ -0.61
EDC3-215ENST00000569007 CSDC2Q9Y534 153 aaKnown RBP11.24□□□□□ -0.61
EDC3-215ENST00000569007 HERC1Q15751 4861 aa11.24□□□□□ -0.61
EDC3-215ENST00000569007 GVQW2A0A096LPI5 108 aaPredicted RBP11.23□□□□□ -0.61
EDC3-215ENST00000569007 IFITM2Q01629 132 aa11.23□□□□□ -0.61
EDC3-215ENST00000569007 SMAGPQ0VAQ4 97 aa11.23□□□□□ -0.61
EDC3-215ENST00000569007 RNASE13Q5GAN3 156 aaKnown RBP11.23□□□□□ -0.61
EDC3-215ENST00000569007 PHOX2AO14813 284 aa11.22□□□□□ -0.61
EDC3-215ENST00000569007 TCAPO15273 167 aa11.22□□□□□ -0.61
EDC3-215ENST00000569007 ORMDL3Q8N138 153 aa11.22□□□□□ -0.61
EDC3-215ENST00000569007 TMEM18Q96B42 140 aa11.22□□□□□ -0.61
EDC3-215ENST00000569007 CD164L2Q6UWJ8 174 aa11.21□□□□□ -0.61
EDC3-215ENST00000569007 TMEM136Q6ZRR5 245 aa11.21□□□□□ -0.61
EDC3-215ENST00000569007 Q6ZUT4 128 aa11.21□□□□□ -0.61
EDC3-215ENST00000569007 TIMM21Q9BVV7 248 aa11.21□□□□□ -0.61
EDC3-215ENST00000569007 IGHV1-58A0A0C4DH39 117 aa11.2□□□□□ -0.62
EDC3-215ENST00000569007 RPL39P62891 51 aaKnown RBP11.2□□□□□ -0.62
EDC3-215ENST00000569007 CIRBPQ14011 172 aaKnown RBP11.2□□□□□ -0.62
EDC3-215ENST00000569007 PRELID3AQ96N28 172 aa11.2□□□□□ -0.62
EDC3-215ENST00000569007 TRAV13-1A0A0B4J241 112 aa11.19□□□□□ -0.62
EDC3-215ENST00000569007 C1orf196B1AJZ1 125 aa11.19□□□□□ -0.62
EDC3-215ENST00000569007 CHTF8P0CG12 524 aa11.19□□□□□ -0.62
EDC3-215ENST00000569007 KRTAP10-4P60372 401 aaPredicted RBP11.19□□□□□ -0.62
EDC3-215ENST00000569007 ADCYAP1P18509 176 aa11.18□□□□□ -0.62
EDC3-215ENST00000569007 COX6A2Q02221 97 aa11.18□□□□□ -0.62
EDC3-215ENST00000569007 UQCC3Q6UW78 93 aa11.18□□□□□ -0.62
EDC3-215ENST00000569007 LINC00526Q96FQ7 95 aa11.18□□□□□ -0.62
EDC3-215ENST00000569007 DPH3Q96FX2 82 aa11.18□□□□□ -0.62
EDC3-215ENST00000569007 TMEM218A2RU14 115 aa11.17□□□□□ -0.62
EDC3-215ENST00000569007 COX7A2LO14548 114 aa11.16□□□□□ -0.62
EDC3-215ENST00000569007 SPACA4Q8TDM5 124 aa11.16□□□□□ -0.62
EDC3-215ENST00000569007 FAM104AQ969W3 186 aa11.16□□□□□ -0.62
EDC3-215ENST00000569007 SPANXA1Q9NS26 97 aa11.16□□□□□ -0.62
EDC3-215ENST00000569007 A0A087WYN8 130 aa11.15□□□□□ -0.62
EDC3-215ENST00000569007 LOC389332A0A1B0GUA5 103 aa11.15□□□□□ -0.62
EDC3-215ENST00000569007 RAB5AP20339 215 aa11.15□□□□□ -0.62
EDC3-215ENST00000569007 RPL37AP61513 92 aaKnown RBP11.15□□□□□ -0.62
EDC3-215ENST00000569007 PRSS3P2Q8NHM4 247 aa11.15□□□□□ -0.62
EDC3-215ENST00000569007 OPRPNQ99935 248 aaPredicted RBP11.15□□□□□ -0.62
EDC3-215ENST00000569007 LAMTOR2Q9Y2Q5 125 aa11.15□□□□□ -0.62
EDC3-215ENST00000569007 ZNF561-AS1K7EIQ3 104 aa11.14□□□□□ -0.63
EDC3-215ENST00000569007 MALP21145 153 aa11.14□□□□□ -0.63
EDC3-215ENST00000569007 IGKV2-24A0A0C4DH68 120 aa11.13□□□□□ -0.63
EDC3-215ENST00000569007 PRSS47A8MTI9 375 aa11.13□□□□□ -0.63
EDC3-215ENST00000569007 MRPS36P82909 103 aaKnown RBP11.13□□□□□ -0.63
EDC3-215ENST00000569007 C5orf38Q86SI9 138 aa11.13□□□□□ -0.63
EDC3-215ENST00000569007 CARD19Q96LW7 228 aa11.13□□□□□ -0.63
EDC3-215ENST00000569007 IMMP2LQ96T52 175 aa11.13□□□□□ -0.63
EDC3-215ENST00000569007 MAP1LC3AQ9H492 121 aa11.13□□□□□ -0.63
EDC3-215ENST00000569007 LRP1Q07954 4544 aaKnown RBP11.12□□□□□ -0.63
EDC3-215ENST00000569007 PKHD1L1Q86WI1 4243 aa11.12□□□□□ -0.63
EDC3-215ENST00000569007 CTDSP1Q9GZU7 261 aa11.12□□□□□ -0.63
EDC3-215ENST00000569007 SYCNQ0VAF6 134 aa11.11□□□□□ -0.63
EDC3-215ENST00000569007 MAJINQ3KP22 176 aa11.11□□□□□ -0.63
EDC3-215ENST00000569007 COMMD7Q86VX2 200 aa11.11□□□□□ -0.63
EDC3-215ENST00000569007 SEC11CQ9BY50 192 aa11.11□□□□□ -0.63
EDC3-215ENST00000569007 PLAC8Q9NZF1 115 aa11.11□□□□□ -0.63
EDC3-215ENST00000569007 IGLV4-69A0A075B6H9 119 aa11.1□□□□□ -0.63
EDC3-215ENST00000569007 A0A096LNI7 61 aa11.1□□□□□ -0.63
EDC3-215ENST00000569007 IFITM10A6NMD0 228 aa11.1□□□□□ -0.63
EDC3-215ENST00000569007 Q8N8P6 123 aa11.1□□□□□ -0.63
EDC3-215ENST00000569007 FAT3Q8TDW7 4589 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms