RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 BOD1L2Q8IYS8 172 aa10.32□□□□□ -0.76
COMMD4-221ENST00000567935 Q8NAQ8 132 aa10.32□□□□□ -0.76
COMMD4-221ENST00000567935 PHLDA1Q8WV24 401 aaPredicted RBP10.32□□□□□ -0.76
COMMD4-221ENST00000567935 Q9UF83 564 aa10.32□□□□□ -0.76
COMMD4-221ENST00000567935 GAGE12JA6NER3 117 aa10.31□□□□□ -0.76
COMMD4-221ENST00000567935 H7C423 109 aa10.31□□□□□ -0.76
COMMD4-221ENST00000567935 DEFB130BP0DP73 79 aa10.31□□□□□ -0.76
COMMD4-221ENST00000567935 DEFB130AP0DP74 79 aa10.31□□□□□ -0.76
COMMD4-221ENST00000567935 HERVK_113P61574 105 aa10.31□□□□□ -0.76
COMMD4-221ENST00000567935 CTAG1AP78358 180 aa10.31□□□□□ -0.76
COMMD4-221ENST00000567935 MRPS36P82909 103 aaKnown RBP10.31□□□□□ -0.76
COMMD4-221ENST00000567935 GAGE1Q13065 139 aa10.31□□□□□ -0.76
COMMD4-221ENST00000567935 GAGE4Q13068 117 aa10.31□□□□□ -0.76
COMMD4-221ENST00000567935 GAGE5Q13069 117 aa10.31□□□□□ -0.76
COMMD4-221ENST00000567935 GAGE13Q4V321 117 aa10.31□□□□□ -0.76
COMMD4-221ENST00000567935 FAM222AQ5U5X8 452 aa10.31□□□□□ -0.76
COMMD4-221ENST00000567935 NFE4Q86UQ8 179 aa10.31□□□□□ -0.76
COMMD4-221ENST00000567935 CSDC2Q9Y534 153 aaKnown RBP10.31□□□□□ -0.76
COMMD4-221ENST00000567935 SPART-AS1P0CW21 52 aa10.3□□□□□ -0.76
COMMD4-221ENST00000567935 LINC00694P0DN24 101 aa10.3□□□□□ -0.76
COMMD4-221ENST00000567935 AMELXQ99217 191 aa10.3□□□□□ -0.76
COMMD4-221ENST00000567935 PRO0255Q9UI72 69 aa10.3□□□□□ -0.76
COMMD4-221ENST00000567935 UBE2D4Q9Y2X8 147 aa10.3□□□□□ -0.76
COMMD4-221ENST00000567935 KIAA1109Q2LD37 5005 aa10.29□□□□□ -0.76
COMMD4-221ENST00000567935 IGLV4-69A0A075B6H9 119 aa10.29□□□□□ -0.76
COMMD4-221ENST00000567935 IGHV3-38A0A0C4DH36 116 aa10.29□□□□□ -0.76
COMMD4-221ENST00000567935 FGF6P10767 208 aa10.29□□□□□ -0.76
COMMD4-221ENST00000567935 NMUP48645 174 aa10.29□□□□□ -0.76
COMMD4-221ENST00000567935 DEFB104AQ8WTQ1 72 aa10.29□□□□□ -0.76
COMMD4-221ENST00000567935 C2orf88Q9BSF0 95 aa10.29□□□□□ -0.76
COMMD4-221ENST00000567935 SNHG12Q9BXW3 62 aa10.29□□□□□ -0.76
COMMD4-221ENST00000567935 TRBV25-1A0A075B6N4 114 aa10.28□□□□□ -0.76
COMMD4-221ENST00000567935 C11orf86A6NJI1 115 aa10.28□□□□□ -0.76
COMMD4-221ENST00000567935 E9PLD3 99 aa10.28□□□□□ -0.76
COMMD4-221ENST00000567935 DAD1P61803 113 aa10.28□□□□□ -0.76
COMMD4-221ENST00000567935 TMEM243Q9BU79 118 aa10.28□□□□□ -0.76
COMMD4-221ENST00000567935 ATP5G1P05496 136 aa10.27□□□□□ -0.77
COMMD4-221ENST00000567935 DGAT2L7PQ6IED9 249 aa10.27□□□□□ -0.77
COMMD4-221ENST00000567935 SBSPONQ8IVN8 264 aa10.27□□□□□ -0.77
COMMD4-221ENST00000567935 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.26□□□□□ -0.77
COMMD4-221ENST00000567935 IGKV2-29A2NJV5 120 aaPredicted RBP10.26□□□□□ -0.77
COMMD4-221ENST00000567935 ZNF25P17030 456 aaPredicted RBP10.26□□□□□ -0.77
COMMD4-221ENST00000567935 HIGD1BQ9P298 99 aa10.26□□□□□ -0.77
COMMD4-221ENST00000567935 UBE2L6O14933 153 aa10.25□□□□□ -0.77
COMMD4-221ENST00000567935 NTM-AS1Q6ZSK4 140 aa10.25□□□□□ -0.77
COMMD4-221ENST00000567935 CHAC1Q9BUX1 264 aa10.25□□□□□ -0.77
COMMD4-221ENST00000567935 IGKV2D-26A0A0A0MRZ7 120 aa10.24□□□□□ -0.77
COMMD4-221ENST00000567935 TRBV6-8A0A0A6YYG3 113 aa10.24□□□□□ -0.77
COMMD4-221ENST00000567935 EREGO14944 169 aa10.24□□□□□ -0.77
COMMD4-221ENST00000567935 PAX4O43316 350 aa10.24□□□□□ -0.77
COMMD4-221ENST00000567935 SEC11AP67812 179 aa10.24□□□□□ -0.77
COMMD4-221ENST00000567935 C2orf91Q6ZV80 131 aa10.24□□□□□ -0.77
COMMD4-221ENST00000567935 SH2D6Q7Z4S9 175 aa10.24□□□□□ -0.77
COMMD4-221ENST00000567935 PCP2Q8IVA1 136 aa10.24□□□□□ -0.77
COMMD4-221ENST00000567935 TMEM101Q96IK0 257 aa10.24□□□□□ -0.77
COMMD4-221ENST00000567935 OPRPNQ99935 248 aaPredicted RBP10.24□□□□□ -0.77
COMMD4-221ENST00000567935 C11orf68Q9H3H3 251 aaKnown RBP10.24□□□□□ -0.77
COMMD4-221ENST00000567935 HECTD4Q9Y4D8 3996 aa10.24□□□□□ -0.77
COMMD4-221ENST00000567935 TRAV26-1A0A087WT03 109 aa10.23□□□□□ -0.77
COMMD4-221ENST00000567935 TINCRA0A1B0GVN0 87 aa10.23□□□□□ -0.77
COMMD4-221ENST00000567935 GYPEP15421 78 aa10.23□□□□□ -0.77
COMMD4-221ENST00000567935 COL5A1-AS1Q5SY13 56 aa10.23□□□□□ -0.77
COMMD4-221ENST00000567935 TMEM170BQ5T4T1 132 aa10.23□□□□□ -0.77
COMMD4-221ENST00000567935 AMMECR1LQ6DCA0 310 aa10.23□□□□□ -0.77
COMMD4-221ENST00000567935 Q6ZUT4 128 aa10.23□□□□□ -0.77
COMMD4-221ENST00000567935 OR5A1Q8NGJ0 315 aa10.23□□□□□ -0.77
COMMD4-221ENST00000567935 ATP6V0E2Q8NHE4 81 aa10.23□□□□□ -0.77
COMMD4-221ENST00000567935 FAM104AQ969W3 186 aa10.23□□□□□ -0.77
COMMD4-221ENST00000567935 LOC100131303A0A0U1RQF7 123 aa10.22□□□□□ -0.77
COMMD4-221ENST00000567935 HSD52Q0P140 79 aa10.22□□□□□ -0.77
COMMD4-221ENST00000567935 ZNF22P17026 224 aaPredicted RBP10.21□□□□□ -0.77
COMMD4-221ENST00000567935 TIRAPP58753 221 aa10.21□□□□□ -0.77
COMMD4-221ENST00000567935 FAM19A3Q7Z5A8 133 aa10.21□□□□□ -0.77
COMMD4-221ENST00000567935 TRAV8-6A0A0B4J262 113 aa10.2□□□□□ -0.78
COMMD4-221ENST00000567935 A0A0J9YXV3 536 aa10.2□□□□□ -0.78
COMMD4-221ENST00000567935 MYMXA0A1B0GTQ4 84 aa10.2□□□□□ -0.78
COMMD4-221ENST00000567935 TMEM223A0PJW6 202 aa10.2□□□□□ -0.78
COMMD4-221ENST00000567935 DEFB4AO15263 64 aa10.2□□□□□ -0.78
COMMD4-221ENST00000567935 UBE2D1P51668 147 aa10.2□□□□□ -0.78
COMMD4-221ENST00000567935 TCTAP57738 103 aa10.2□□□□□ -0.78
COMMD4-221ENST00000567935 CEMP1Q6PRD7 247 aaPredicted RBP10.2□□□□□ -0.78
COMMD4-221ENST00000567935 ABCA13Q86UQ4 5058 aa10.2□□□□□ -0.78
COMMD4-221ENST00000567935 PLEKHB2Q96CS7 222 aa10.2□□□□□ -0.78
COMMD4-221ENST00000567935 CDC42SE2Q9NRR3 84 aa10.2□□□□□ -0.78
COMMD4-221ENST00000567935 CELA1Q9UNI1 258 aa10.2□□□□□ -0.78
COMMD4-221ENST00000567935 HINT1P49773 126 aaPredicted RBP10.19□□□□□ -0.78
COMMD4-221ENST00000567935 TAL2Q16559 108 aa10.19□□□□□ -0.78
COMMD4-221ENST00000567935 MPV17L2Q567V2 206 aa10.19□□□□□ -0.78
COMMD4-221ENST00000567935 GEMIN7Q9H840 131 aaKnown RBP10.19□□□□□ -0.78
COMMD4-221ENST00000567935 DNAH10Q8IVF4 4471 aa10.18□□□□□ -0.78
COMMD4-221ENST00000567935 IGLV5-45A0A087WSX0 123 aa10.18□□□□□ -0.78
COMMD4-221ENST00000567935 H3BRM9 83 aa10.18□□□□□ -0.78
COMMD4-221ENST00000567935 LEPROTO15243 131 aa10.18□□□□□ -0.78
COMMD4-221ENST00000567935 HERVK_113P63121 156 aa10.18□□□□□ -0.78
COMMD4-221ENST00000567935 BATFQ16520 125 aa10.18□□□□□ -0.78
COMMD4-221ENST00000567935 MRPL23Q16540 153 aaKnown RBP10.18□□□□□ -0.78
COMMD4-221ENST00000567935 BVES-AS1Q5T3Y7 98 aa10.18□□□□□ -0.78
COMMD4-221ENST00000567935 TP73-AS1Q9UF72 201 aa10.18□□□□□ -0.78
COMMD4-221ENST00000567935 F5H768 121 aa10.17□□□□□ -0.78
COMMD4-221ENST00000567935 H3BNG1 76 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms