RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 GAGE13Q4V321 117 aa6.23□□□□□ -1.41
LSM3P5-201ENST00000566307 NTM-AS1Q6ZSK4 140 aa6.23□□□□□ -1.41
LSM3P5-201ENST00000566307 FAM19A3Q7Z5A8 133 aa6.23□□□□□ -1.41
LSM3P5-201ENST00000566307 VCX2Q9H322 139 aa6.23□□□□□ -1.41
LSM3P5-201ENST00000566307 STAB1Q9NY15 2570 aa6.23□□□□□ -1.41
LSM3P5-201ENST00000566307 E9PLD3 99 aa6.22□□□□□ -1.41
LSM3P5-201ENST00000566307 M0R143 59 aa6.22□□□□□ -1.41
LSM3P5-201ENST00000566307 SH2D6Q7Z4S9 175 aa6.22□□□□□ -1.41
LSM3P5-201ENST00000566307 STPG4Q8N801 248 aa6.22□□□□□ -1.41
LSM3P5-201ENST00000566307 PHLDA1Q8WV24 401 aaPredicted RBP6.22□□□□□ -1.41
LSM3P5-201ENST00000566307 TMEM243Q9BU79 118 aa6.22□□□□□ -1.41
LSM3P5-201ENST00000566307 TRBV25-1A0A075B6N4 114 aa6.21□□□□□ -1.42
LSM3P5-201ENST00000566307 TRBV6-8A0A0A6YYG3 113 aa6.21□□□□□ -1.42
LSM3P5-201ENST00000566307 IGHV3-38A0A0C4DH36 116 aa6.21□□□□□ -1.42
LSM3P5-201ENST00000566307 H3BNG1 76 aa6.21□□□□□ -1.42
LSM3P5-201ENST00000566307 HERVK_113P61574 105 aa6.21□□□□□ -1.42
LSM3P5-201ENST00000566307 HIGD1BQ9P298 99 aa6.21□□□□□ -1.42
LSM3P5-201ENST00000566307 COL6A5A8TX70 2615 aa6.21□□□□□ -1.42
LSM3P5-201ENST00000566307 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.2□□□□□ -1.42
LSM3P5-201ENST00000566307 TINCRA0A1B0GVN0 87 aa6.2□□□□□ -1.42
LSM3P5-201ENST00000566307 IGKV2-29A2NJV5 120 aaPredicted RBP6.2□□□□□ -1.42
LSM3P5-201ENST00000566307 PAX4O43316 350 aa6.2□□□□□ -1.42
LSM3P5-201ENST00000566307 TIRAPP58753 221 aa6.2□□□□□ -1.42
LSM3P5-201ENST00000566307 SEC11AP67812 179 aa6.2□□□□□ -1.42
LSM3P5-201ENST00000566307 CTAG1AP78358 180 aa6.2□□□□□ -1.42
LSM3P5-201ENST00000566307 ATP6V0E2Q8NHE4 81 aa6.2□□□□□ -1.42
LSM3P5-201ENST00000566307 VSIG2Q96IQ7 327 aa6.2□□□□□ -1.42
LSM3P5-201ENST00000566307 C2orf88Q9BSF0 95 aa6.2□□□□□ -1.42
LSM3P5-201ENST00000566307 CELA1Q9UNI1 258 aa6.2□□□□□ -1.42
LSM3P5-201ENST00000566307 FBN1P35555 2871 aaKnown RBP6.2□□□□□ -1.42
LSM3P5-201ENST00000566307 IGLV5-45A0A087WSX0 123 aa6.19□□□□□ -1.42
LSM3P5-201ENST00000566307 IGKV2D-26A0A0A0MRZ7 120 aa6.19□□□□□ -1.42
LSM3P5-201ENST00000566307 LOC100131303A0A0U1RQF7 123 aa6.19□□□□□ -1.42
LSM3P5-201ENST00000566307 GYPEP15421 78 aa6.19□□□□□ -1.42
LSM3P5-201ENST00000566307 ZNF22P17026 224 aaPredicted RBP6.19□□□□□ -1.42
LSM3P5-201ENST00000566307 C2orf91Q6ZV80 131 aa6.19□□□□□ -1.42
LSM3P5-201ENST00000566307 OPRPNQ99935 248 aaPredicted RBP6.19□□□□□ -1.42
LSM3P5-201ENST00000566307 CHAC1Q9BUX1 264 aa6.19□□□□□ -1.42
LSM3P5-201ENST00000566307 SNHG12Q9BXW3 62 aa6.19□□□□□ -1.42
LSM3P5-201ENST00000566307 CDC42SE2Q9NRR3 84 aa6.19□□□□□ -1.42
LSM3P5-201ENST00000566307 A0A1B0GUV1 79 aa6.18□□□□□ -1.42
LSM3P5-201ENST00000566307 TMEM223A0PJW6 202 aa6.18□□□□□ -1.42
LSM3P5-201ENST00000566307 NMUP48645 174 aa6.18□□□□□ -1.42
LSM3P5-201ENST00000566307 UBE2D1P51668 147 aa6.18□□□□□ -1.42
LSM3P5-201ENST00000566307 DGAT2L7PQ6IED9 249 aa6.18□□□□□ -1.42
LSM3P5-201ENST00000566307 Q6ZUT4 128 aa6.18□□□□□ -1.42
LSM3P5-201ENST00000566307 OR5A1Q8NGJ0 315 aa6.18□□□□□ -1.42
LSM3P5-201ENST00000566307 DEFB104AQ8WTQ1 72 aa6.18□□□□□ -1.42
LSM3P5-201ENST00000566307 TMEM101Q96IK0 257 aa6.18□□□□□ -1.42
LSM3P5-201ENST00000566307 SPATA25Q9BR10 227 aa6.18□□□□□ -1.42
LSM3P5-201ENST00000566307 TM2D3Q9BRN9 247 aa6.18□□□□□ -1.42
LSM3P5-201ENST00000566307 TRRAPQ9Y4A5 3859 aa6.18□□□□□ -1.42
LSM3P5-201ENST00000566307 A0A0J9YXV3 536 aa6.17□□□□□ -1.42
LSM3P5-201ENST00000566307 K7EIL1 84 aa6.17□□□□□ -1.42
LSM3P5-201ENST00000566307 UBE2L6O14933 153 aa6.17□□□□□ -1.42
LSM3P5-201ENST00000566307 DEFB4AO15263 64 aa6.17□□□□□ -1.42
LSM3P5-201ENST00000566307 MRPL23Q16540 153 aaKnown RBP6.17□□□□□ -1.42
LSM3P5-201ENST00000566307 TAL2Q16559 108 aa6.17□□□□□ -1.42
LSM3P5-201ENST00000566307 C12orf74Q32Q52 190 aa6.17□□□□□ -1.42
LSM3P5-201ENST00000566307 PCP2Q8IVA1 136 aa6.17□□□□□ -1.42
LSM3P5-201ENST00000566307 MYMXA0A1B0GTQ4 84 aa6.16□□□□□ -1.42
LSM3P5-201ENST00000566307 LEPROTO15243 131 aa6.16□□□□□ -1.42
LSM3P5-201ENST00000566307 CCL25O15444 150 aa6.16□□□□□ -1.42
LSM3P5-201ENST00000566307 HERVK_113P63121 156 aa6.16□□□□□ -1.42
LSM3P5-201ENST00000566307 HSD52Q0P140 79 aa6.16□□□□□ -1.42
LSM3P5-201ENST00000566307 AMMECR1LQ6DCA0 310 aa6.16□□□□□ -1.42
LSM3P5-201ENST00000566307 CEMP1Q6PRD7 247 aaPredicted RBP6.16□□□□□ -1.42
LSM3P5-201ENST00000566307 PLEKHB2Q96CS7 222 aa6.16□□□□□ -1.42
LSM3P5-201ENST00000566307 ICOSQ9Y6W8 199 aa6.16□□□□□ -1.42
LSM3P5-201ENST00000566307 DNAH3Q8TD57 4116 aa6.15□□□□□ -1.42
LSM3P5-201ENST00000566307 F5H768 121 aa6.15□□□□□ -1.42
LSM3P5-201ENST00000566307 H3BRM9 83 aa6.15□□□□□ -1.42
LSM3P5-201ENST00000566307 TMEM170BQ5T4T1 132 aa6.15□□□□□ -1.42
LSM3P5-201ENST00000566307 IGHV1-58A0A0C4DH39 117 aa6.14□□□□□ -1.43
LSM3P5-201ENST00000566307 COL5A1-AS1Q5SY13 56 aa6.14□□□□□ -1.43
LSM3P5-201ENST00000566307 BVES-AS1Q5T3Y7 98 aa6.14□□□□□ -1.43
LSM3P5-201ENST00000566307 LINC00242Q5T6M2 205 aa6.14□□□□□ -1.43
LSM3P5-201ENST00000566307 LELP1Q5T871 98 aa6.14□□□□□ -1.43
LSM3P5-201ENST00000566307 KRTAP4-12Q9BQ66 201 aa6.14□□□□□ -1.43
LSM3P5-201ENST00000566307 CHCHD5Q9BSY4 110 aa6.14□□□□□ -1.43
LSM3P5-201ENST00000566307 GEMIN7Q9H840 131 aaKnown RBP6.14□□□□□ -1.43
LSM3P5-201ENST00000566307 RETNQ9HD89 108 aa6.14□□□□□ -1.43
LSM3P5-201ENST00000566307 A0A096LPF7 62 aa6.13□□□□□ -1.43
LSM3P5-201ENST00000566307 TRAV8-6A0A0B4J262 113 aa6.13□□□□□ -1.43
LSM3P5-201ENST00000566307 IGLV5-39A0A0G2JS06 123 aa6.13□□□□□ -1.43
LSM3P5-201ENST00000566307 J3QQQ9 107 aa6.13□□□□□ -1.43
LSM3P5-201ENST00000566307 KRTAP21-3Q3LHN1 58 aa6.13□□□□□ -1.43
LSM3P5-201ENST00000566307 MPV17L2Q567V2 206 aa6.13□□□□□ -1.43
LSM3P5-201ENST00000566307 MAPKAPK5-AS1Q8N8E1 139 aa6.13□□□□□ -1.43
LSM3P5-201ENST00000566307 TP73-AS1Q9UF72 201 aa6.13□□□□□ -1.43
LSM3P5-201ENST00000566307 ANK2Q01484 3957 aa6.13□□□□□ -1.43
LSM3P5-201ENST00000566307 CMYA5Q8N3K9 4069 aa6.13□□□□□ -1.43
LSM3P5-201ENST00000566307 A0A0J9YY99 117 aa6.12□□□□□ -1.43
LSM3P5-201ENST00000566307 ZNF815PA8K554 130 aa6.12□□□□□ -1.43
LSM3P5-201ENST00000566307 LGALS3P17931 250 aaKnown RBP6.12□□□□□ -1.43
LSM3P5-201ENST00000566307 HINT1P49773 126 aaPredicted RBP6.12□□□□□ -1.43
LSM3P5-201ENST00000566307 RBX1P62877 108 aa6.12□□□□□ -1.43
LSM3P5-201ENST00000566307 GAGE6Q13070 117 aa6.12□□□□□ -1.43
LSM3P5-201ENST00000566307 LINC01561Q8N1V8 128 aa6.12□□□□□ -1.43
LSM3P5-201ENST00000566307 C11orf45Q8TAV5 145 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms