RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 TP73-AS1Q9UF72 201 aa8.83□□□□□ -1
SF3B3-206ENST00000565990 KLK5Q9Y337 293 aaPredicted RBP8.83□□□□□ -1
SF3B3-206ENST00000565990 CHTOPQ9Y3Y2 248 aaKnown RBP8.83□□□□□ -1
SF3B3-206ENST00000565990 PLECQ15149 4684 aaKnown RBP8.82□□□□□ -1
SF3B3-206ENST00000565990 IGHV3-53P01767 116 aa8.82□□□□□ -1
SF3B3-206ENST00000565990 HTN3P15516 51 aa8.82□□□□□ -1
SF3B3-206ENST00000565990 CRYBA4P53673 196 aa8.82□□□□□ -1
SF3B3-206ENST00000565990 TCTAP57738 103 aa8.82□□□□□ -1
SF3B3-206ENST00000565990 ZFAND6Q6FIF0 208 aa8.82□□□□□ -1
SF3B3-206ENST00000565990 VSIG2Q96IQ7 327 aa8.82□□□□□ -1
SF3B3-206ENST00000565990 TIMM17AQ99595 171 aa8.82□□□□□ -1
SF3B3-206ENST00000565990 PRO0255Q9UI72 69 aa8.82□□□□□ -1
SF3B3-206ENST00000565990 CYSLTR1Q9Y271 337 aa8.82□□□□□ -1
SF3B3-206ENST00000565990 TRGV4A0A0C4DH28 118 aa8.81□□□□□ -1
SF3B3-206ENST00000565990 A0A1B0GWB2 263 aa8.81□□□□□ -1
SF3B3-206ENST00000565990 TRBV6-4A0A1B0GX49 114 aa8.81□□□□□ -1
SF3B3-206ENST00000565990 E9PLD3 99 aa8.81□□□□□ -1
SF3B3-206ENST00000565990 RHODO00212 210 aa8.81□□□□□ -1
SF3B3-206ENST00000565990 VCYO14598 125 aa8.81□□□□□ -1
SF3B3-206ENST00000565990 POLR2KP53803 58 aaKnown RBP8.81□□□□□ -1
SF3B3-206ENST00000565990 C2orf66Q6UXQ4 117 aa8.81□□□□□ -1
SF3B3-206ENST00000565990 Q6ZSN1 163 aa8.81□□□□□ -1
SF3B3-206ENST00000565990 C14orf178Q8N769 122 aaPredicted RBP8.81□□□□□ -1
SF3B3-206ENST00000565990 APLNQ9ULZ1 77 aa8.81□□□□□ -1
SF3B3-206ENST00000565990 TRAV26-1A0A087WT03 109 aa8.8□□□□□ -1
SF3B3-206ENST00000565990 A0A087WWL8 130 aa8.8□□□□□ -1
SF3B3-206ENST00000565990 IGKV2D-26A0A0A0MRZ7 120 aa8.8□□□□□ -1
SF3B3-206ENST00000565990 IGLL5B9A064 214 aa8.8□□□□□ -1
SF3B3-206ENST00000565990 HERVK_113P61574 105 aa8.8□□□□□ -1
SF3B3-206ENST00000565990 RHOHQ15669 191 aa8.8□□□□□ -1
SF3B3-206ENST00000565990 SLC25A29Q8N8R3 303 aa8.8□□□□□ -1
SF3B3-206ENST00000565990 IGHV3-73A0A0B4J1V6 119 aa8.79□□□□□ -1
SF3B3-206ENST00000565990 TRAV26-2A0A0B4J265 109 aa8.79□□□□□ -1
SF3B3-206ENST00000565990 MYMXA0A1B0GTQ4 84 aa8.79□□□□□ -1
SF3B3-206ENST00000565990 TMEM238LA0A1B0GVL6 79 aa8.79□□□□□ -1
SF3B3-206ENST00000565990 A6NJY4 79 aa8.79□□□□□ -1
SF3B3-206ENST00000565990 H3BUT2 72 aa8.79□□□□□ -1
SF3B3-206ENST00000565990 PAX4O43316 350 aa8.79□□□□□ -1
SF3B3-206ENST00000565990 BAALCQ8WXS3 180 aa8.79□□□□□ -1
SF3B3-206ENST00000565990 KIR2DL4Q99706 377 aa8.79□□□□□ -1
SF3B3-206ENST00000565990 TRBV27A0A0K0K1C4 114 aa8.78□□□□□ -1
SF3B3-206ENST00000565990 GCSHP23434 173 aa8.78□□□□□ -1
SF3B3-206ENST00000565990 NEGR1Q7Z3B1 354 aa8.78□□□□□ -1
SF3B3-206ENST00000565990 SPCS1Q9Y6A9 102 aa8.78□□□□□ -1
SF3B3-206ENST00000565990 TRBV7-3A0A075B6L6 115 aa8.77□□□□□ -1.01
SF3B3-206ENST00000565990 A0A0J9YY99 117 aa8.77□□□□□ -1.01
SF3B3-206ENST00000565990 MGPP08493 103 aa8.77□□□□□ -1.01
SF3B3-206ENST00000565990 FXYD2P54710 66 aa8.77□□□□□ -1.01
SF3B3-206ENST00000565990 FAM74A4Q5TZK3 123 aa8.77□□□□□ -1.01
SF3B3-206ENST00000565990 C15orf53Q8NAA6 179 aa8.77□□□□□ -1.01
SF3B3-206ENST00000565990 TRBV10-1A0A0K0K1A3 114 aa8.76□□□□□ -1.01
SF3B3-206ENST00000565990 PMVKQ15126 192 aa8.76□□□□□ -1.01
SF3B3-206ENST00000565990 LYRM7Q5U5X0 104 aa8.76□□□□□ -1.01
SF3B3-206ENST00000565990 Q9UF83 564 aa8.76□□□□□ -1.01
SF3B3-206ENST00000565990 A0A096LPF7 62 aa8.75□□□□□ -1.01
SF3B3-206ENST00000565990 PRSS29PA6NIE9 313 aa8.75□□□□□ -1.01
SF3B3-206ENST00000565990 IGIPA6NJ69 53 aa8.75□□□□□ -1.01
SF3B3-206ENST00000565990 C11orf86A6NJI1 115 aa8.75□□□□□ -1.01
SF3B3-206ENST00000565990 K7EQD1 137 aa8.75□□□□□ -1.01
SF3B3-206ENST00000565990 M0QY20 66 aa8.75□□□□□ -1.01
SF3B3-206ENST00000565990 MRPL23Q16540 153 aaKnown RBP8.75□□□□□ -1.01
SF3B3-206ENST00000565990 RPL39LQ96EH5 51 aaKnown RBP8.75□□□□□ -1.01
SF3B3-206ENST00000565990 PRADC1Q9BSG0 188 aa8.75□□□□□ -1.01
SF3B3-206ENST00000565990 SPANXB1Q9NS25 103 aaPredicted RBP8.75□□□□□ -1.01
SF3B3-206ENST00000565990 F5H697 171 aa8.74□□□□□ -1.01
SF3B3-206ENST00000565990 F8W1H4 67 aa8.74□□□□□ -1.01
SF3B3-206ENST00000565990 LINC00694P0DN24 101 aa8.74□□□□□ -1.01
SF3B3-206ENST00000565990 GYPEP15421 78 aa8.74□□□□□ -1.01
SF3B3-206ENST00000565990 PCP4P48539 62 aa8.74□□□□□ -1.01
SF3B3-206ENST00000565990 SUMO4Q6EEV6 95 aa8.74□□□□□ -1.01
SF3B3-206ENST00000565990 NFE4Q86UQ8 179 aa8.74□□□□□ -1.01
SF3B3-206ENST00000565990 HIST1H4GQ99525 98 aa8.74□□□□□ -1.01
SF3B3-206ENST00000565990 LOC100131303A0A0U1RQF7 123 aa8.73□□□□□ -1.01
SF3B3-206ENST00000565990 ZNF56Q15929 161 aa8.73□□□□□ -1.01
SF3B3-206ENST00000565990 SH2D6Q7Z4S9 175 aa8.73□□□□□ -1.01
SF3B3-206ENST00000565990 MAPKAPK5-AS1Q8N8E1 139 aa8.73□□□□□ -1.01
SF3B3-206ENST00000565990 VPS25Q9BRG1 176 aa8.73□□□□□ -1.01
SF3B3-206ENST00000565990 NHP2Q9NX24 153 aaKnown RBP8.73□□□□□ -1.01
SF3B3-206ENST00000565990 ICOSQ9Y6W8 199 aa8.73□□□□□ -1.01
SF3B3-206ENST00000565990 SDHAF1A6NFY7 115 aa8.72□□□□□ -1.01
SF3B3-206ENST00000565990 J3QR89 54 aa8.72□□□□□ -1.01
SF3B3-206ENST00000565990 P0DMU3 169 aa8.72□□□□□ -1.01
SF3B3-206ENST00000565990 FAM231AP0DMU4 169 aa8.72□□□□□ -1.01
SF3B3-206ENST00000565990 FAM231CP0DMU5 169 aa8.72□□□□□ -1.01
SF3B3-206ENST00000565990 LYPD5Q6UWN5 251 aa8.72□□□□□ -1.01
SF3B3-206ENST00000565990 RAB37Q96AX2 223 aa8.72□□□□□ -1.01
SF3B3-206ENST00000565990 DNAJC30Q96LL9 226 aa8.72□□□□□ -1.01
SF3B3-206ENST00000565990 ESRGQ1W209 222 aa8.71□□□□□ -1.02
SF3B3-206ENST00000565990 ZNRF2Q8NHG8 242 aa8.71□□□□□ -1.02
SF3B3-206ENST00000565990 IGLV4-69A0A075B6H9 119 aa8.7□□□□□ -1.02
SF3B3-206ENST00000565990 ZNF815PA8K554 130 aa8.7□□□□□ -1.02
SF3B3-206ENST00000565990 UBE2D1P51668 147 aa8.7□□□□□ -1.02
SF3B3-206ENST00000565990 TIRAPP58753 221 aa8.7□□□□□ -1.02
SF3B3-206ENST00000565990 UBE2D3P61077 147 aa8.7□□□□□ -1.02
SF3B3-206ENST00000565990 UBE2D2P62837 147 aa8.7□□□□□ -1.02
SF3B3-206ENST00000565990 PYGO1Q9Y3Y4 419 aa8.7□□□□□ -1.02
SF3B3-206ENST00000565990 GAGE12JA6NER3 117 aa8.69□□□□□ -1.02
SF3B3-206ENST00000565990 I3L3M4 83 aa8.69□□□□□ -1.02
SF3B3-206ENST00000565990 RPL36AP83881 106 aaKnown RBP8.69□□□□□ -1.02
SF3B3-206ENST00000565990 GAGE4Q13068 117 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms