RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 TMEM191AQ9H0A3 160 aa4.08□□□□□ -1.76
TCF4-228ENST00000565393 OSTCQ9NRP0 149 aa4.08□□□□□ -1.76
TCF4-228ENST00000565393 TMEM242Q9NWH2 141 aa4.08□□□□□ -1.76
TCF4-228ENST00000565393 HSPG2P98160 4391 aa4.07□□□□□ -1.76
TCF4-228ENST00000565393 IGHV1-58A0A0C4DH39 117 aa4.07□□□□□ -1.76
TCF4-228ENST00000565393 SMKR1H3BMG3 65 aa4.07□□□□□ -1.76
TCF4-228ENST00000565393 ZNF561-AS1K7EIQ3 104 aa4.07□□□□□ -1.76
TCF4-228ENST00000565393 PPP1R17O96001 155 aa4.07□□□□□ -1.76
TCF4-228ENST00000565393 TSHBP01222 138 aa4.07□□□□□ -1.76
TCF4-228ENST00000565393 ESDP10768 282 aa4.07□□□□□ -1.76
TCF4-228ENST00000565393 MALP21145 153 aa4.07□□□□□ -1.76
TCF4-228ENST00000565393 POLR2KP53803 58 aaKnown RBP4.07□□□□□ -1.76
TCF4-228ENST00000565393 FOXI1Q12951 378 aa4.07□□□□□ -1.76
TCF4-228ENST00000565393 CIRBPQ14011 172 aaKnown RBP4.07□□□□□ -1.76
TCF4-228ENST00000565393 FAM74A3Q4VXF1 159 aa4.07□□□□□ -1.76
TCF4-228ENST00000565393 Q6ZRU5 148 aa4.07□□□□□ -1.76
TCF4-228ENST00000565393 LINC00518Q8N0U6 118 aa4.07□□□□□ -1.76
TCF4-228ENST00000565393 SPACA4Q8TDM5 124 aa4.07□□□□□ -1.76
TCF4-228ENST00000565393 LINC00526Q96FQ7 95 aa4.07□□□□□ -1.76
TCF4-228ENST00000565393 CDC42SE2Q9NRR3 84 aa4.07□□□□□ -1.76
TCF4-228ENST00000565393 NAT8BQ9UHF3 227 aa4.07□□□□□ -1.76
TCF4-228ENST00000565393 UBR4Q5T4S7 5183 aa4.06□□□□□ -1.76
TCF4-228ENST00000565393 GVQW2A0A096LPI5 108 aaPredicted RBP4.06□□□□□ -1.76
TCF4-228ENST00000565393 C7orf77A4D0Y5 90 aa4.06□□□□□ -1.76
TCF4-228ENST00000565393 C1orf196B1AJZ1 125 aa4.06□□□□□ -1.76
TCF4-228ENST00000565393 PHOX2AO14813 284 aa4.06□□□□□ -1.76
TCF4-228ENST00000565393 CAMPP49913 170 aa4.06□□□□□ -1.76
TCF4-228ENST00000565393 SMAGPQ0VAQ4 97 aa4.06□□□□□ -1.76
TCF4-228ENST00000565393 PEA15Q15121 130 aa4.06□□□□□ -1.76
TCF4-228ENST00000565393 ADIRFQ15847 76 aa4.06□□□□□ -1.76
TCF4-228ENST00000565393 NUP35Q8NFH5 326 aa4.06□□□□□ -1.76
TCF4-228ENST00000565393 KIR2DL4Q99706 377 aa4.06□□□□□ -1.76
TCF4-228ENST00000565393 PLAC8Q9NZF1 115 aa4.06□□□□□ -1.76
TCF4-228ENST00000565393 LINC00474Q9P2X8 69 aa4.06□□□□□ -1.76
TCF4-228ENST00000565393 PLA2G2DQ9UNK4 145 aa4.06□□□□□ -1.76
TCF4-228ENST00000565393 V9GYV3 84 aa4.06□□□□□ -1.76
TCF4-228ENST00000565393 LRP1BQ9NZR2 4599 aa4.05□□□□□ -1.76
TCF4-228ENST00000565393 TRAV13-1A0A0B4J241 112 aa4.05□□□□□ -1.76
TCF4-228ENST00000565393 TRBV27A0A0K0K1C4 114 aa4.05□□□□□ -1.76
TCF4-228ENST00000565393 CKS2P33552 79 aa4.05□□□□□ -1.76
TCF4-228ENST00000565393 SUMO2P61956 95 aaKnown RBP4.05□□□□□ -1.76
TCF4-228ENST00000565393 RPL23P62829 140 aaKnown RBP4.05□□□□□ -1.76
TCF4-228ENST00000565393 SYCNQ0VAF6 134 aa4.05□□□□□ -1.76
TCF4-228ENST00000565393 GAGE2BQ13066 116 aa4.05□□□□□ -1.76
TCF4-228ENST00000565393 MRPL51Q4U2R6 128 aaKnown RBP4.05□□□□□ -1.76
TCF4-228ENST00000565393 RNASE13Q5GAN3 156 aaKnown RBP4.05□□□□□ -1.76
TCF4-228ENST00000565393 CD164L2Q6UWJ8 174 aa4.05□□□□□ -1.76
TCF4-228ENST00000565393 MRPL52Q86TS9 123 aaKnown RBP4.05□□□□□ -1.76
TCF4-228ENST00000565393 ISOC2Q96AB3 205 aa4.05□□□□□ -1.76
TCF4-228ENST00000565393 TMEM18Q96B42 140 aa4.05□□□□□ -1.76
TCF4-228ENST00000565393 NAT8Q9UHE5 227 aa4.05□□□□□ -1.76
TCF4-228ENST00000565393 PKIGQ9Y2B9 76 aa4.05□□□□□ -1.76
TCF4-228ENST00000565393 DNAH5Q8TE73 4624 aa4.04□□□□□ -1.76
TCF4-228ENST00000565393 IGLV4-69A0A075B6H9 119 aa4.04□□□□□ -1.76
TCF4-228ENST00000565393 A0A096LNI7 61 aa4.04□□□□□ -1.76
TCF4-228ENST00000565393 LINC00862A6NCI5 91 aa4.04□□□□□ -1.76
TCF4-228ENST00000565393 C9JQL5 133 aa4.04□□□□□ -1.76
TCF4-228ENST00000565393 COX7A2LO14548 114 aa4.04□□□□□ -1.76
TCF4-228ENST00000565393 PPP1R2P9O14990 202 aa4.04□□□□□ -1.76
TCF4-228ENST00000565393 FAM104BQ5XKR9 115 aa4.04□□□□□ -1.76
TCF4-228ENST00000565393 C5orf38Q86SI9 138 aa4.04□□□□□ -1.76
TCF4-228ENST00000565393 NRACQ8N912 160 aa4.04□□□□□ -1.76
TCF4-228ENST00000565393 CARD19Q96LW7 228 aa4.04□□□□□ -1.76
TCF4-228ENST00000565393 UBE2D4Q9Y2X8 147 aa4.04□□□□□ -1.76
TCF4-228ENST00000565393 HERC1Q15751 4861 aa4.04□□□□□ -1.76
TCF4-228ENST00000565393 APOBP04114 4563 aaKnown RBP4.04□□□□□ -1.76
TCF4-228ENST00000565393 A0A1B0GW15 77 aa4.03□□□□□ -1.76
TCF4-228ENST00000565393 SMIM27A0A1W2PRY6 76 aa4.03□□□□□ -1.76
TCF4-228ENST00000565393 F8W036 122 aa4.03□□□□□ -1.76
TCF4-228ENST00000565393 APOMO95445 188 aa4.03□□□□□ -1.76
TCF4-228ENST00000565393 RAB14P61106 215 aa4.03□□□□□ -1.76
TCF4-228ENST00000565393 SRSF3P84103 164 aaKnown RBP4.03□□□□□ -1.76
TCF4-228ENST00000565393 SVIPQ8NHG7 77 aa4.03□□□□□ -1.76
TCF4-228ENST00000565393 CAMK2N2Q96S95 79 aa4.03□□□□□ -1.76
TCF4-228ENST00000565393 C20orf78Q9BR46 151 aa4.03□□□□□ -1.76
TCF4-228ENST00000565393 CBY1Q9Y3M2 126 aa4.03□□□□□ -1.76
TCF4-228ENST00000565393 CSDC2Q9Y534 153 aaKnown RBP4.03□□□□□ -1.76
TCF4-228ENST00000565393 LOC107984640A0A0U1RRK4 108 aa4.02□□□□□ -1.77
TCF4-228ENST00000565393 PRSS47A8MTI9 375 aa4.02□□□□□ -1.77
TCF4-228ENST00000565393 TCAPO15273 167 aa4.02□□□□□ -1.77
TCF4-228ENST00000565393 SCO1O75880 301 aa4.02□□□□□ -1.77
TCF4-228ENST00000565393 TNFRSF6BO95407 300 aa4.02□□□□□ -1.77
TCF4-228ENST00000565393 S100A8P05109 93 aa4.02□□□□□ -1.77
TCF4-228ENST00000565393 RAB5AP20339 215 aa4.02□□□□□ -1.77
TCF4-228ENST00000565393 AKR1D1P51857 326 aa4.02□□□□□ -1.77
TCF4-228ENST00000565393 C21orf62-AS1Q17RA5 79 aa4.02□□□□□ -1.77
TCF4-228ENST00000565393 ANKRD39Q53RE8 183 aa4.02□□□□□ -1.77
TCF4-228ENST00000565393 MRPL54Q6P161 138 aaKnown RBP4.02□□□□□ -1.77
TCF4-228ENST00000565393 OPRPNQ99935 248 aaPredicted RBP4.02□□□□□ -1.77
TCF4-228ENST00000565393 SMDT1Q9H4I9 107 aa4.02□□□□□ -1.77
TCF4-228ENST00000565393 TRBV24-1A0A075B6N3 115 aa4.01□□□□□ -1.77
TCF4-228ENST00000565393 D6R8Y8 96 aa4.01□□□□□ -1.77
TCF4-228ENST00000565393 MT1HL1P0DM35 61 aa4.01□□□□□ -1.77
TCF4-228ENST00000565393 PTTG1IPP53801 180 aa4.01□□□□□ -1.77
TCF4-228ENST00000565393 RPL39P62891 51 aaKnown RBP4.01□□□□□ -1.77
TCF4-228ENST00000565393 HBBP68871 147 aa4.01□□□□□ -1.77
TCF4-228ENST00000565393 PRR3P79522 188 aaKnown RBP4.01□□□□□ -1.77
TCF4-228ENST00000565393 SPINK6Q6UWN8 80 aa4.01□□□□□ -1.77
TCF4-228ENST00000565393 Q6ZRP5 223 aa4.01□□□□□ -1.77
TCF4-228ENST00000565393 TMEM136Q6ZRR5 245 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms