RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 C7orf77A4D0Y5 90 aa11.86□□□□□ -0.51
CLN6-204ENST00000564752 CNBPP62633 177 aaKnown RBP11.86□□□□□ -0.51
CLN6-204ENST00000564752 OR5A1Q8NGJ0 315 aa11.86□□□□□ -0.51
CLN6-204ENST00000564752 CHCHD10Q8WYQ3 142 aaPredicted RBP11.86□□□□□ -0.51
CLN6-204ENST00000564752 PANO1I0J062 215 aa11.85□□□□□ -0.51
CLN6-204ENST00000564752 FCER1GP30273 86 aa11.85□□□□□ -0.51
CLN6-204ENST00000564752 SUMO2P61956 95 aaKnown RBP11.85□□□□□ -0.51
CLN6-204ENST00000564752 FAM104BQ5XKR9 115 aa11.85□□□□□ -0.51
CLN6-204ENST00000564752 NRACQ8N912 160 aa11.85□□□□□ -0.51
CLN6-204ENST00000564752 UBR4Q5T4S7 5183 aa11.84□□□□□ -0.51
CLN6-204ENST00000564752 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.84□□□□□ -0.51
CLN6-204ENST00000564752 VCYO14598 125 aa11.84□□□□□ -0.51
CLN6-204ENST00000564752 PPP1R2P9O14990 202 aa11.84□□□□□ -0.51
CLN6-204ENST00000564752 RAB14P61106 215 aa11.84□□□□□ -0.51
CLN6-204ENST00000564752 MRPL51Q4U2R6 128 aaKnown RBP11.84□□□□□ -0.51
CLN6-204ENST00000564752 MRPL54Q6P161 138 aaKnown RBP11.84□□□□□ -0.51
CLN6-204ENST00000564752 CFAP161Q6P656 301 aa11.84□□□□□ -0.51
CLN6-204ENST00000564752 S100A8P05109 93 aa11.83□□□□□ -0.52
CLN6-204ENST00000564752 HNRNPA3P51991 378 aaKnown RBP11.83□□□□□ -0.52
CLN6-204ENST00000564752 HBBP68871 147 aa11.83□□□□□ -0.52
CLN6-204ENST00000564752 MRPL52Q86TS9 123 aaKnown RBP11.83□□□□□ -0.52
CLN6-204ENST00000564752 C15orf56Q8N910 161 aa11.83□□□□□ -0.52
CLN6-204ENST00000564752 KIR2DL4Q99706 377 aa11.83□□□□□ -0.52
CLN6-204ENST00000564752 LINC00862A6NCI5 91 aa11.81□□□□□ -0.52
CLN6-204ENST00000564752 F8W036 122 aa11.81□□□□□ -0.52
CLN6-204ENST00000564752 CKS2P33552 79 aa11.81□□□□□ -0.52
CLN6-204ENST00000564752 XCL1P47992 114 aa11.81□□□□□ -0.52
CLN6-204ENST00000564752 CIRBPQ14011 172 aaKnown RBP11.81□□□□□ -0.52
CLN6-204ENST00000564752 PLA2G2DQ9UNK4 145 aa11.81□□□□□ -0.52
CLN6-204ENST00000564752 IGHV3-64A0A075B6Q5 118 aa11.8□□□□□ -0.52
CLN6-204ENST00000564752 LINC00959A0A1B0GUT2 108 aa11.8□□□□□ -0.52
CLN6-204ENST00000564752 SMAGPQ0VAQ4 97 aa11.8□□□□□ -0.52
CLN6-204ENST00000564752 FOXI1Q12951 378 aa11.8□□□□□ -0.52
CLN6-204ENST00000564752 HIGD2BQ4VC39 106 aa11.8□□□□□ -0.52
CLN6-204ENST00000564752 CDC42SE2Q9NRR3 84 aa11.8□□□□□ -0.52
CLN6-204ENST00000564752 A0A1B0GXF2 115 aa11.79□□□□□ -0.52
CLN6-204ENST00000564752 CCL25O15444 150 aa11.79□□□□□ -0.52
CLN6-204ENST00000564752 SLPIP03973 132 aa11.79□□□□□ -0.52
CLN6-204ENST00000564752 ZNF664Q8N3J9 261 aa11.79□□□□□ -0.52
CLN6-204ENST00000564752 C20orf78Q9BR46 151 aa11.79□□□□□ -0.52
CLN6-204ENST00000564752 D6R8Y8 96 aa11.78□□□□□ -0.52
CLN6-204ENST00000564752 PNRC1Q12796 327 aaPredicted RBP11.78□□□□□ -0.52
CLN6-204ENST00000564752 SS18Q15532 418 aa11.78□□□□□ -0.52
CLN6-204ENST00000564752 TRBV24-1A0A075B6N3 115 aa11.77□□□□□ -0.53
CLN6-204ENST00000564752 GVQW2A0A096LPI5 108 aaPredicted RBP11.77□□□□□ -0.53
CLN6-204ENST00000564752 TNFRSF6BO95407 300 aa11.77□□□□□ -0.53
CLN6-204ENST00000564752 ATP5L2Q7Z4Y8 100 aa11.77□□□□□ -0.53
CLN6-204ENST00000564752 TMEM18Q96B42 140 aa11.77□□□□□ -0.53
CLN6-204ENST00000564752 UBE2D4Q9Y2X8 147 aa11.77□□□□□ -0.53
CLN6-204ENST00000564752 TCAPO15273 167 aa11.76□□□□□ -0.53
CLN6-204ENST00000564752 RPL32P62910 135 aaKnown RBP11.76□□□□□ -0.53
CLN6-204ENST00000564752 SMIM2Q9BVW6 85 aa11.76□□□□□ -0.53
CLN6-204ENST00000564752 CSDC2Q9Y534 153 aaKnown RBP11.76□□□□□ -0.53
CLN6-204ENST00000564752 PPBPP02775 128 aa11.75□□□□□ -0.53
CLN6-204ENST00000564752 DPH3Q96FX2 82 aa11.75□□□□□ -0.53
CLN6-204ENST00000564752 IGHV1-58A0A0C4DH39 117 aa11.74□□□□□ -0.53
CLN6-204ENST00000564752 NPYP01303 97 aa11.74□□□□□ -0.53
CLN6-204ENST00000564752 CD164L2Q6UWJ8 174 aa11.74□□□□□ -0.53
CLN6-204ENST00000564752 A0A087WYN8 130 aa11.73□□□□□ -0.53
CLN6-204ENST00000564752 PHOX2AO14813 284 aa11.73□□□□□ -0.53
CLN6-204ENST00000564752 MT-ND4LP03901 98 aa11.73□□□□□ -0.53
CLN6-204ENST00000564752 CHTF8P0CG12 524 aa11.73□□□□□ -0.53
CLN6-204ENST00000564752 RNASE13Q5GAN3 156 aaKnown RBP11.73□□□□□ -0.53
CLN6-204ENST00000564752 CLLU1Q5K131 121 aa11.73□□□□□ -0.53
CLN6-204ENST00000564752 Q6ZUT4 128 aa11.73□□□□□ -0.53
CLN6-204ENST00000564752 ORMDL3Q8N138 153 aa11.73□□□□□ -0.53
CLN6-204ENST00000564752 SPACA4Q8TDM5 124 aa11.73□□□□□ -0.53
CLN6-204ENST00000564752 ANAPC16Q96DE5 110 aa11.73□□□□□ -0.53
CLN6-204ENST00000564752 Q6ZRU5 148 aa11.72□□□□□ -0.53
CLN6-204ENST00000564752 TIMM21Q9BVV7 248 aa11.72□□□□□ -0.53
CLN6-204ENST00000564752 C1orf196B1AJZ1 125 aa11.71□□□□□ -0.53
CLN6-204ENST00000564752 TRAV13-1A0A0B4J241 112 aa11.7□□□□□ -0.54
CLN6-204ENST00000564752 MT1HL1P0DM35 61 aa11.7□□□□□ -0.54
CLN6-204ENST00000564752 RPL39P62891 51 aaKnown RBP11.7□□□□□ -0.54
CLN6-204ENST00000564752 COX6A2Q02221 97 aa11.7□□□□□ -0.54
CLN6-204ENST00000564752 TMEM136Q6ZRR5 245 aa11.7□□□□□ -0.54
CLN6-204ENST00000564752 PRELID3AQ96N28 172 aa11.7□□□□□ -0.54
CLN6-204ENST00000564752 MALP21145 153 aa11.69□□□□□ -0.54
CLN6-204ENST00000564752 PLAC8Q9NZF1 115 aa11.69□□□□□ -0.54
CLN6-204ENST00000564752 ZNF561-AS1K7EIQ3 104 aa11.68□□□□□ -0.54
CLN6-204ENST00000564752 COX7A2LO14548 114 aa11.68□□□□□ -0.54
CLN6-204ENST00000564752 PRSS3P2Q8NHM4 247 aa11.68□□□□□ -0.54
CLN6-204ENST00000564752 LINC00526Q96FQ7 95 aa11.68□□□□□ -0.54
CLN6-204ENST00000564752 CARD19Q96LW7 228 aa11.68□□□□□ -0.54
CLN6-204ENST00000564752 SPANXA1Q9NS26 97 aa11.68□□□□□ -0.54
CLN6-204ENST00000564752 PKIGQ9Y2B9 76 aa11.68□□□□□ -0.54
CLN6-204ENST00000564752 TNXBP22105 4242 aa11.67□□□□□ -0.54
CLN6-204ENST00000564752 IGKV2-24A0A0C4DH68 120 aa11.67□□□□□ -0.54
CLN6-204ENST00000564752 RAB5AP20339 215 aa11.67□□□□□ -0.54
CLN6-204ENST00000564752 LAMTOR2Q9Y2Q5 125 aa11.66□□□□□ -0.54
CLN6-204ENST00000564752 SYCNQ0VAF6 134 aa11.65□□□□□ -0.54
CLN6-204ENST00000564752 MAJINQ3KP22 176 aa11.65□□□□□ -0.54
CLN6-204ENST00000564752 UQCC3Q6UW78 93 aa11.65□□□□□ -0.54
CLN6-204ENST00000564752 MAP1LC3AQ9H492 121 aa11.65□□□□□ -0.54
CLN6-204ENST00000564752 MRPS36P82909 103 aaKnown RBP11.64□□□□□ -0.55
CLN6-204ENST00000564752 IFITM2Q01629 132 aa11.64□□□□□ -0.55
CLN6-204ENST00000564752 C7orf33Q8WU49 177 aa11.64□□□□□ -0.55
CLN6-204ENST00000564752 A0A096LNI7 61 aa11.63□□□□□ -0.55
CLN6-204ENST00000564752 LOC389332A0A1B0GUA5 103 aa11.63□□□□□ -0.55
CLN6-204ENST00000564752 ADCYAP1P18509 176 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms