RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 KRTAP19-1Q8IUB9 90 aa6.54□□□□□ -1.36
CDH1-206ENST00000564676 TMEM101Q96IK0 257 aa6.54□□□□□ -1.36
CDH1-206ENST00000564676 C20orf78Q9BR46 151 aa6.54□□□□□ -1.36
CDH1-206ENST00000564676 HSPG2P98160 4391 aa6.54□□□□□ -1.36
CDH1-206ENST00000564676 C7orf77A4D0Y5 90 aa6.53□□□□□ -1.36
CDH1-206ENST00000564676 USP17L23D6RBM5 183 aa6.53□□□□□ -1.36
CDH1-206ENST00000564676 TNFRSF6BO95407 300 aa6.53□□□□□ -1.36
CDH1-206ENST00000564676 PPBPP02775 128 aa6.53□□□□□ -1.36
CDH1-206ENST00000564676 ZNF25P17030 456 aaPredicted RBP6.53□□□□□ -1.36
CDH1-206ENST00000564676 OR5A1Q8NGJ0 315 aa6.53□□□□□ -1.36
CDH1-206ENST00000564676 SEC11CQ9BY50 192 aa6.53□□□□□ -1.36
CDH1-206ENST00000564676 TRBV24-1A0A075B6N3 115 aa6.52□□□□□ -1.37
CDH1-206ENST00000564676 DGAT2L7PQ6IED9 249 aa6.52□□□□□ -1.37
CDH1-206ENST00000564676 KRTAP26-1Q6PEX3 210 aa6.52□□□□□ -1.37
CDH1-206ENST00000564676 TMEM136Q6ZRR5 245 aa6.52□□□□□ -1.37
CDH1-206ENST00000564676 ORMDL3Q8N138 153 aa6.52□□□□□ -1.37
CDH1-206ENST00000564676 IMMP2LQ96T52 175 aa6.52□□□□□ -1.37
CDH1-206ENST00000564676 CTDSP1Q9GZU7 261 aa6.52□□□□□ -1.37
CDH1-206ENST00000564676 DNAH8Q96JB1 4490 aa6.52□□□□□ -1.37
CDH1-206ENST00000564676 GAGE12HA6NDE8 117 aa6.51□□□□□ -1.37
CDH1-206ENST00000564676 PHOX2AO14813 284 aa6.51□□□□□ -1.37
CDH1-206ENST00000564676 NPYP01303 97 aa6.51□□□□□ -1.37
CDH1-206ENST00000564676 RPL32P62910 135 aaKnown RBP6.51□□□□□ -1.37
CDH1-206ENST00000564676 SMAGPQ0VAQ4 97 aa6.51□□□□□ -1.37
CDH1-206ENST00000564676 TMEM18Q96B42 140 aa6.51□□□□□ -1.37
CDH1-206ENST00000564676 PRELID3AQ96N28 172 aa6.51□□□□□ -1.37
CDH1-206ENST00000564676 SMIM2Q9BVW6 85 aa6.51□□□□□ -1.37
CDH1-206ENST00000564676 TCAPO15273 167 aa6.5□□□□□ -1.37
CDH1-206ENST00000564676 XGP55808 180 aa6.5□□□□□ -1.37
CDH1-206ENST00000564676 CHCHD10Q8WYQ3 142 aaPredicted RBP6.5□□□□□ -1.37
CDH1-206ENST00000564676 PRSS1P07477 247 aa6.49□□□□□ -1.37
CDH1-206ENST00000564676 RAB5AP20339 215 aa6.49□□□□□ -1.37
CDH1-206ENST00000564676 S100PP25815 95 aa6.49□□□□□ -1.37
CDH1-206ENST00000564676 LINC01620Q4KN68 170 aa6.49□□□□□ -1.37
CDH1-206ENST00000564676 CFAP161Q6P656 301 aa6.49□□□□□ -1.37
CDH1-206ENST00000564676 MRPL52Q86TS9 123 aaKnown RBP6.49□□□□□ -1.37
CDH1-206ENST00000564676 ZNF664Q8N3J9 261 aa6.49□□□□□ -1.37
CDH1-206ENST00000564676 CLRN3Q8NCR9 226 aa6.49□□□□□ -1.37
CDH1-206ENST00000564676 CDC42SE2Q9NRR3 84 aa6.49□□□□□ -1.37
CDH1-206ENST00000564676 TRAV9-1A0A075B6T8 112 aa6.48□□□□□ -1.37
CDH1-206ENST00000564676 LOC389332A0A1B0GUA5 103 aa6.48□□□□□ -1.37
CDH1-206ENST00000564676 LINC00959A0A1B0GUT2 108 aa6.48□□□□□ -1.37
CDH1-206ENST00000564676 hDV102S1A0JD36 115 aa6.48□□□□□ -1.37
CDH1-206ENST00000564676 XCL1P47992 114 aa6.48□□□□□ -1.37
CDH1-206ENST00000564676 HAMPP81172 84 aa6.48□□□□□ -1.37
CDH1-206ENST00000564676 SS18Q15532 418 aa6.48□□□□□ -1.37
CDH1-206ENST00000564676 C10orf91Q5T1B1 145 aa6.48□□□□□ -1.37
CDH1-206ENST00000564676 Q8N1X5 172 aa6.48□□□□□ -1.37
CDH1-206ENST00000564676 KRTAP9-9Q9BYP9 154 aa6.48□□□□□ -1.37
CDH1-206ENST00000564676 KRTAP9-4Q9BYQ2 154 aa6.48□□□□□ -1.37
CDH1-206ENST00000564676 MAP1LC3AQ9H492 121 aa6.48□□□□□ -1.37
CDH1-206ENST00000564676 RPS10P5Q9NQ39 176 aa6.48□□□□□ -1.37
CDH1-206ENST00000564676 AP5S1Q9NUS5 200 aa6.48□□□□□ -1.37
CDH1-206ENST00000564676 FAM30AQ9NZY2 134 aa6.48□□□□□ -1.37
CDH1-206ENST00000564676 LAMTOR2Q9Y2Q5 125 aa6.48□□□□□ -1.37
CDH1-206ENST00000564676 UBE2D4Q9Y2X8 147 aa6.48□□□□□ -1.37
CDH1-206ENST00000564676 CCL25O15444 150 aa6.47□□□□□ -1.37
CDH1-206ENST00000564676 CARHSP1Q9Y2V2 147 aaKnown RBP6.47□□□□□ -1.37
CDH1-206ENST00000564676 CSDC2Q9Y534 153 aaKnown RBP6.47□□□□□ -1.37
CDH1-206ENST00000564676 RPL39P62891 51 aaKnown RBP6.46□□□□□ -1.38
CDH1-206ENST00000564676 FOXI1Q12951 378 aa6.46□□□□□ -1.38
CDH1-206ENST00000564676 RHEBQ15382 184 aa6.46□□□□□ -1.38
CDH1-206ENST00000564676 NDUFA5Q16718 116 aa6.46□□□□□ -1.38
CDH1-206ENST00000564676 RNASE13Q5GAN3 156 aaKnown RBP6.46□□□□□ -1.38
CDH1-206ENST00000564676 TIMM21Q9BVV7 248 aa6.46□□□□□ -1.38
CDH1-206ENST00000564676 KRTAP17-1Q9BYP8 105 aa6.46□□□□□ -1.38
CDH1-206ENST00000564676 KRTAP4-5Q9BYR2 181 aa6.46□□□□□ -1.38
CDH1-206ENST00000564676 TRAV13-1A0A0B4J241 112 aa6.45□□□□□ -1.38
CDH1-206ENST00000564676 PRSS47A8MTI9 375 aa6.45□□□□□ -1.38
CDH1-206ENST00000564676 EPM2AB3EWF7 344 aa6.45□□□□□ -1.38
CDH1-206ENST00000564676 APOC3P02656 99 aa6.45□□□□□ -1.38
CDH1-206ENST00000564676 SMR3BP02814 79 aaPredicted RBP6.45□□□□□ -1.38
CDH1-206ENST00000564676 KIAA1644Q3SXP7 199 aa6.45□□□□□ -1.38
CDH1-206ENST00000564676 CD164L2Q6UWJ8 174 aa6.45□□□□□ -1.38
CDH1-206ENST00000564676 Q6ZUT4 128 aa6.45□□□□□ -1.38
CDH1-206ENST00000564676 Q8N8P6 123 aa6.45□□□□□ -1.38
CDH1-206ENST00000564676 SPANXA1Q9NS26 97 aa6.45□□□□□ -1.38
CDH1-206ENST00000564676 FAT1Q14517 4588 aa6.45□□□□□ -1.38
CDH1-206ENST00000564676 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.44□□□□□ -1.38
CDH1-206ENST00000564676 C1orf196B1AJZ1 125 aa6.44□□□□□ -1.38
CDH1-206ENST00000564676 COX19Q49B96 90 aa6.44□□□□□ -1.38
CDH1-206ENST00000564676 HIGD2BQ4VC39 106 aa6.44□□□□□ -1.38
CDH1-206ENST00000564676 Q6ZSA8 131 aa6.44□□□□□ -1.38
CDH1-206ENST00000564676 C15orf56Q8N910 161 aa6.44□□□□□ -1.38
CDH1-206ENST00000564676 C9orf163Q8N9P6 203 aa6.44□□□□□ -1.38
CDH1-206ENST00000564676 IGHV1-58A0A0C4DH39 117 aa6.43□□□□□ -1.38
CDH1-206ENST00000564676 IFI27P40305 119 aaPredicted RBP6.43□□□□□ -1.38
CDH1-206ENST00000564676 CNBPP62633 177 aaKnown RBP6.43□□□□□ -1.38
CDH1-206ENST00000564676 SVBPQ8N300 66 aa6.43□□□□□ -1.38
CDH1-206ENST00000564676 OPRPNQ99935 248 aaPredicted RBP6.43□□□□□ -1.38
CDH1-206ENST00000564676 GNB1LQ9BYB4 327 aa6.43□□□□□ -1.38
CDH1-206ENST00000564676 NXT2Q9NPJ8 142 aaKnown RBP6.43□□□□□ -1.38
CDH1-206ENST00000564676 ABCA13Q86UQ4 5058 aa6.42□□□□□ -1.38
CDH1-206ENST00000564676 KRTAP4-8A0A0G2JLE6 195 aa6.42□□□□□ -1.38
CDH1-206ENST00000564676 SNAPINO95295 136 aa6.42□□□□□ -1.38
CDH1-206ENST00000564676 MALP21145 153 aa6.42□□□□□ -1.38
CDH1-206ENST00000564676 MRPS36P82909 103 aaKnown RBP6.42□□□□□ -1.38
CDH1-206ENST00000564676 FABP9Q0Z7S8 132 aa6.42□□□□□ -1.38
CDH1-206ENST00000564676 ORMDL2Q53FV1 153 aa6.42□□□□□ -1.38
CDH1-206ENST00000564676 CYSLTR1Q9Y271 337 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms