RNA–Protein interactions for RNA: ENST00000564674.5

DENND4A-206, Transcript of DENN domain containing 4A, humanhuman

TSL 1 (best)

Gene DENND4A, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-206ENST00000564674 TRGV11A0A075B6L2 103 aa13.42□□□□□ -0.26
DENND4A-206ENST00000564674 MSMBP08118 114 aa13.42□□□□□ -0.26
DENND4A-206ENST00000564674 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.42□□□□□ -0.26
DENND4A-206ENST00000564674 MIAQ16674 131 aa13.42□□□□□ -0.26
DENND4A-206ENST00000564674 COX6A2Q02221 97 aa13.41□□□□□ -0.26
DENND4A-206ENST00000564674 Q9H8V8 135 aa13.41□□□□□ -0.26
DENND4A-206ENST00000564674 FN1P02751 2386 aaKnown RBP13.41□□□□□ -0.26
DENND4A-206ENST00000564674 RS1O15537 224 aa13.41□□□□□ -0.26
DENND4A-206ENST00000564674 MRPS36P82909 103 aaKnown RBP13.41□□□□□ -0.26
DENND4A-206ENST00000564674 UBE2E2Q96LR5 201 aa13.41□□□□□ -0.26
DENND4A-206ENST00000564674 K7EMT4 169 aa13.4□□□□□ -0.26
DENND4A-206ENST00000564674 PSMB8P28062 276 aa13.4□□□□□ -0.26
DENND4A-206ENST00000564674 MEIG1Q5JSS6 88 aa13.4□□□□□ -0.26
DENND4A-206ENST00000564674 H3BUA1 57 aa13.4□□□□□ -0.26
DENND4A-206ENST00000564674 C11orf44Q8N8P7 122 aa13.4□□□□□ -0.26
DENND4A-206ENST00000564674 HELZ2Q9BYK8 2649 aaKnown RBP13.4□□□□□ -0.26
DENND4A-206ENST00000564674 TMEM61Q8N0U2 210 aa13.4□□□□□ -0.26
DENND4A-206ENST00000564674 NIPBLQ6KC79 2804 aaeCLIP13.39□□□□□ -0.27
DENND4A-206ENST00000564674 XCL2Q9UBD3 114 aa13.39□□□□□ -0.27
DENND4A-206ENST00000564674 C10orf105Q8TEF2 133 aa13.38□□□□□ -0.27
DENND4A-206ENST00000564674 UBE2D4Q9Y2X8 147 aa13.38□□□□□ -0.27
DENND4A-206ENST00000564674 ANKRD17O75179 2603 aaKnown RBP13.38□□□□□ -0.27
DENND4A-206ENST00000564674 CHCHD7Q9BUK0 85 aa13.38□□□□□ -0.27
DENND4A-206ENST00000564674 Q8N2B8 174 aa13.38□□□□□ -0.27
DENND4A-206ENST00000564674 TMEM101Q96IK0 257 aa13.37□□□□□ -0.27
DENND4A-206ENST00000564674 NF1P21359 2839 aa13.37□□□□□ -0.27
DENND4A-206ENST00000564674 RBMY1BA6NDE4 496 aaKnown RBP13.37□□□□□ -0.27
DENND4A-206ENST00000564674 RBMY1EA6NEQ0 496 aaKnown RBP13.37□□□□□ -0.27
DENND4A-206ENST00000564674 RBMY1DP0C7P1 496 aaKnown RBP13.37□□□□□ -0.27
DENND4A-206ENST00000564674 TEX15Q9BXT5 2789 aa13.35□□□□□ -0.27
DENND4A-206ENST00000564674 LST1O00453 97 aa13.35□□□□□ -0.27
DENND4A-206ENST00000564674 PIK3CD-AS1Q5SR53 167 aa13.35□□□□□ -0.27
DENND4A-206ENST00000564674 CITED2Q99967 270 aaPredicted RBP13.35□□□□□ -0.27
DENND4A-206ENST00000564674 LINC00694P0DN24 101 aa13.34□□□□□ -0.27
DENND4A-206ENST00000564674 Q9HAA7 133 aa13.34□□□□□ -0.27
DENND4A-206ENST00000564674 HERV-K104P63124 156 aa13.34□□□□□ -0.27
DENND4A-206ENST00000564674 PRIMA1Q86XR5 153 aa13.34□□□□□ -0.27
DENND4A-206ENST00000564674 TINCRA0A1B0GVN0 87 aa13.34□□□□□ -0.27
DENND4A-206ENST00000564674 CIRBPQ14011 172 aaKnown RBP13.34□□□□□ -0.27
DENND4A-206ENST00000564674 SVIPQ8NHG7 77 aa13.34□□□□□ -0.27
DENND4A-206ENST00000564674 TOMM7Q9P0U1 55 aa13.34□□□□□ -0.27
DENND4A-206ENST00000564674 FAM236AA0A1B0GUQ0 79 aa13.33□□□□□ -0.28
DENND4A-206ENST00000564674 FAM236BA0A1B0GV22 79 aa13.33□□□□□ -0.28
DENND4A-206ENST00000564674 PYGO1Q9Y3Y4 419 aa13.32□□□□□ -0.28
DENND4A-206ENST00000564674 TRGV1A0A0A0MS02 117 aa13.32□□□□□ -0.28
DENND4A-206ENST00000564674 SPANXDQ9BXN6 97 aa13.32□□□□□ -0.28
DENND4A-206ENST00000564674 SPANXCQ9NY87 97 aa13.32□□□□□ -0.28
DENND4A-206ENST00000564674 LINC00308Q8TCZ7 52 aa13.32□□□□□ -0.28
DENND4A-206ENST00000564674 YAE1D1Q9NRH1 226 aa13.31□□□□□ -0.28
DENND4A-206ENST00000564674 H3BT86 120 aa13.31□□□□□ -0.28
DENND4A-206ENST00000564674 SOSTDC1Q6X4U4 206 aa13.31□□□□□ -0.28
DENND4A-206ENST00000564674 ZNF415Q09FC8 603 aa13.3□□□□□ -0.28
DENND4A-206ENST00000564674 DOPEY1Q5JWR5 2465 aa13.29□□□□□ -0.28
DENND4A-206ENST00000564674 A0A1W2PRX2 142 aa13.29□□□□□ -0.28
DENND4A-206ENST00000564674 B4DSR2 109 aa13.29□□□□□ -0.28
DENND4A-206ENST00000564674 BRI3O95415 125 aa13.29□□□□□ -0.28
DENND4A-206ENST00000564674 SPANXA1Q9NS26 97 aa13.29□□□□□ -0.28
DENND4A-206ENST00000564674 DAZ2Q13117 558 aaKnown RBP13.28□□□□□ -0.28
DENND4A-206ENST00000564674 DAZ4Q86SG3 579 aaKnown RBP13.28□□□□□ -0.28
DENND4A-206ENST00000564674 DYNLRB2Q8TF09 96 aa13.28□□□□□ -0.28
DENND4A-206ENST00000564674 DAZ3Q9NR90 486 aaKnown RBP13.28□□□□□ -0.28
DENND4A-206ENST00000564674 ACANP16112 2415 aa13.28□□□□□ -0.28
DENND4A-206ENST00000564674 GAGE2AQ6NT46 116 aa13.28□□□□□ -0.28
DENND4A-206ENST00000564674 SHISA2Q6UWI4 295 aa13.28□□□□□ -0.28
DENND4A-206ENST00000564674 BAALC-AS2P0C853 105 aa13.27□□□□□ -0.29
DENND4A-206ENST00000564674 C11orf68Q9H3H3 251 aaKnown RBP13.27□□□□□ -0.29
DENND4A-206ENST00000564674 LINC00242Q5T6M2 205 aa13.26□□□□□ -0.29
DENND4A-206ENST00000564674 BBC3Q96PG8 261 aaPredicted RBP13.26□□□□□ -0.29
DENND4A-206ENST00000564674 MTORP42345 2549 aa13.26□□□□□ -0.29
DENND4A-206ENST00000564674 M0QXV9 152 aa13.26□□□□□ -0.29
DENND4A-206ENST00000564674 SMCR5Q8TEV8 140 aa13.26□□□□□ -0.29
DENND4A-206ENST00000564674 FAM218AQ96MZ4 157 aa13.25□□□□□ -0.29
DENND4A-206ENST00000564674 NDUFA1O15239 70 aa13.24□□□□□ -0.29
DENND4A-206ENST00000564674 NBEAL2Q6ZNJ1 2754 aa13.23□□□□□ -0.29
DENND4A-206ENST00000564674 Q6ZTI0 123 aa13.22□□□□□ -0.29
DENND4A-206ENST00000564674 ATP5G1P05496 136 aa13.22□□□□□ -0.29
DENND4A-206ENST00000564674 PLA2G2AP14555 144 aa13.22□□□□□ -0.29
DENND4A-206ENST00000564674 PRORYQ9H606 182 aa13.21□□□□□ -0.29
DENND4A-206ENST00000564674 MAP6D1Q9H9H5 199 aa13.21□□□□□ -0.29
DENND4A-206ENST00000564674 COX7A2LO14548 114 aa13.21□□□□□ -0.29
DENND4A-206ENST00000564674 KLK5Q9Y337 293 aaPredicted RBP13.21□□□□□ -0.29
DENND4A-206ENST00000564674 SMIM1B2RUZ4 78 aa13.21□□□□□ -0.3
DENND4A-206ENST00000564674 Q6Q795 121 aa13.21□□□□□ -0.3
DENND4A-206ENST00000564674 LOC100131303A0A0U1RQF7 123 aa13.2□□□□□ -0.3
DENND4A-206ENST00000564674 PFN2P35080 140 aa13.2□□□□□ -0.3
DENND4A-206ENST00000564674 TMEM89A2RUT3 159 aa13.19□□□□□ -0.3
DENND4A-206ENST00000564674 C11orf72Q8NBR9 251 aa13.19□□□□□ -0.3
DENND4A-206ENST00000564674 LINC00158P58513 81 aa13.18□□□□□ -0.3
DENND4A-206ENST00000564674 HERVK_113P63121 156 aa13.18□□□□□ -0.3
DENND4A-206ENST00000564674 HIST2H2BCQ6DN03 193 aa13.18□□□□□ -0.3
DENND4A-206ENST00000564674 NTM-AS1Q6ZSK4 140 aa13.18□□□□□ -0.3
DENND4A-206ENST00000564674 INSP01308 110 aa13.18□□□□□ -0.3
DENND4A-206ENST00000564674 Q96MF0 132 aa13.18□□□□□ -0.3
DENND4A-206ENST00000564674 TIRAPP58753 221 aa13.18□□□□□ -0.3
DENND4A-206ENST00000564674 C9orf153Q5TBE3 101 aa13.18□□□□□ -0.3
DENND4A-206ENST00000564674 OR13C6PQ8NH95 151 aa13.18□□□□□ -0.3
DENND4A-206ENST00000564674 MIR7-3HGQ8N6C7 128 aa13.17□□□□□ -0.3
DENND4A-206ENST00000564674 ZNF702PQ9H963 129 aa13.17□□□□□ -0.3
DENND4A-206ENST00000564674 NOP10Q9NPE3 64 aaKnown RBP13.17□□□□□ -0.3
DENND4A-206ENST00000564674 UBE2L6O14933 153 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms