RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 EPM2AB3EWF7 344 aa8.95□□□□□ -0.98
CNOT1-206ENST00000564557 TCAPO15273 167 aa8.95□□□□□ -0.98
CNOT1-206ENST00000564557 PPBPP02775 128 aa8.95□□□□□ -0.98
CNOT1-206ENST00000564557 ESDP10768 282 aa8.95□□□□□ -0.98
CNOT1-206ENST00000564557 IFITM2Q01629 132 aa8.95□□□□□ -0.98
CNOT1-206ENST00000564557 AP5S1Q9NUS5 200 aa8.95□□□□□ -0.98
CNOT1-206ENST00000564557 A0A1B0GXF2 115 aa8.94□□□□□ -0.98
CNOT1-206ENST00000564557 GAGE12HA6NDE8 117 aa8.94□□□□□ -0.98
CNOT1-206ENST00000564557 D6R8Y8 96 aa8.94□□□□□ -0.98
CNOT1-206ENST00000564557 TNFRSF6BO95407 300 aa8.94□□□□□ -0.98
CNOT1-206ENST00000564557 LINC01620Q4KN68 170 aa8.94□□□□□ -0.98
CNOT1-206ENST00000564557 CFAP161Q6P656 301 aa8.94□□□□□ -0.98
CNOT1-206ENST00000564557 TRBV24-1A0A075B6N3 115 aa8.93□□□□□ -0.98
CNOT1-206ENST00000564557 hDV102S1A0JD36 115 aa8.93□□□□□ -0.98
CNOT1-206ENST00000564557 TMEM218A2RU14 115 aa8.93□□□□□ -0.98
CNOT1-206ENST00000564557 KRTAP26-1Q6PEX3 210 aa8.93□□□□□ -0.98
CNOT1-206ENST00000564557 TMEM136Q6ZRR5 245 aa8.93□□□□□ -0.98
CNOT1-206ENST00000564557 ORMDL3Q8N138 153 aa8.93□□□□□ -0.98
CNOT1-206ENST00000564557 CHCHD10Q8WYQ3 142 aaPredicted RBP8.93□□□□□ -0.98
CNOT1-206ENST00000564557 SMR3BP02814 79 aaPredicted RBP8.92□□□□□ -0.98
CNOT1-206ENST00000564557 PRSS1P07477 247 aa8.92□□□□□ -0.98
CNOT1-206ENST00000564557 HAMPP81172 84 aa8.92□□□□□ -0.98
CNOT1-206ENST00000564557 SS18Q15532 418 aa8.92□□□□□ -0.98
CNOT1-206ENST00000564557 HSPG2P98160 4391 aa8.92□□□□□ -0.98
CNOT1-206ENST00000564557 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.91□□□□□ -0.98
CNOT1-206ENST00000564557 PHOX2AO14813 284 aa8.91□□□□□ -0.98
CNOT1-206ENST00000564557 RAB5AP20339 215 aa8.91□□□□□ -0.98
CNOT1-206ENST00000564557 RPL32P62910 135 aaKnown RBP8.91□□□□□ -0.98
CNOT1-206ENST00000564557 MRPL52Q86TS9 123 aaKnown RBP8.91□□□□□ -0.98
CNOT1-206ENST00000564557 COMMD7Q86VX2 200 aa8.91□□□□□ -0.98
CNOT1-206ENST00000564557 ZNF664Q8N3J9 261 aa8.91□□□□□ -0.98
CNOT1-206ENST00000564557 PRELID3AQ96N28 172 aa8.91□□□□□ -0.98
CNOT1-206ENST00000564557 SMIM2Q9BVW6 85 aa8.91□□□□□ -0.98
CNOT1-206ENST00000564557 KRTAP4-5Q9BYR2 181 aa8.91□□□□□ -0.98
CNOT1-206ENST00000564557 FAM30AQ9NZY2 134 aa8.91□□□□□ -0.98
CNOT1-206ENST00000564557 APOBP04114 4563 aaKnown RBP8.91□□□□□ -0.98
CNOT1-206ENST00000564557 NPYP01303 97 aa8.9□□□□□ -0.98
CNOT1-206ENST00000564557 IMMP2LQ96T52 175 aa8.9□□□□□ -0.98
CNOT1-206ENST00000564557 SEC11CQ9BY50 192 aa8.9□□□□□ -0.98
CNOT1-206ENST00000564557 CTDSP1Q9GZU7 261 aa8.9□□□□□ -0.98
CNOT1-206ENST00000564557 CDC42SE2Q9NRR3 84 aa8.9□□□□□ -0.98
CNOT1-206ENST00000564557 LINC00959A0A1B0GUT2 108 aa8.89□□□□□ -0.99
CNOT1-206ENST00000564557 S100PP25815 95 aa8.89□□□□□ -0.99
CNOT1-206ENST00000564557 XCL1P47992 114 aa8.89□□□□□ -0.99
CNOT1-206ENST00000564557 CCL25O15444 150 aa8.88□□□□□ -0.99
CNOT1-206ENST00000564557 Q5VSD8 79 aa8.88□□□□□ -0.99
CNOT1-206ENST00000564557 C9orf163Q8N9P6 203 aa8.88□□□□□ -0.99
CNOT1-206ENST00000564557 MAP1LC3AQ9H492 121 aa8.88□□□□□ -0.99
CNOT1-206ENST00000564557 LAMTOR2Q9Y2Q5 125 aa8.88□□□□□ -0.99
CNOT1-206ENST00000564557 UBE2D4Q9Y2X8 147 aa8.88□□□□□ -0.99
CNOT1-206ENST00000564557 CSDC2Q9Y534 153 aaKnown RBP8.88□□□□□ -0.99
CNOT1-206ENST00000564557 LOC389332A0A1B0GUA5 103 aa8.87□□□□□ -0.99
CNOT1-206ENST00000564557 C1orf196B1AJZ1 125 aa8.87□□□□□ -0.99
CNOT1-206ENST00000564557 ADCYAP1P18509 176 aa8.87□□□□□ -0.99
CNOT1-206ENST00000564557 Q6ZSA8 131 aa8.87□□□□□ -0.99
CNOT1-206ENST00000564557 CNBPP62633 177 aaKnown RBP8.86□□□□□ -0.99
CNOT1-206ENST00000564557 DPH3Q96FX2 82 aa8.86□□□□□ -0.99
CNOT1-206ENST00000564557 CHAC1Q9BUX1 264 aa8.86□□□□□ -0.99
CNOT1-206ENST00000564557 TIMM21Q9BVV7 248 aa8.86□□□□□ -0.99
CNOT1-206ENST00000564557 KRTAP17-1Q9BYP8 105 aa8.86□□□□□ -0.99
CNOT1-206ENST00000564557 IGHV3-64A0A075B6Q5 118 aa8.85□□□□□ -0.99
CNOT1-206ENST00000564557 TRAV9-1A0A075B6T8 112 aa8.85□□□□□ -0.99
CNOT1-206ENST00000564557 TRAV13-1A0A0B4J241 112 aa8.85□□□□□ -0.99
CNOT1-206ENST00000564557 MALP21145 153 aa8.85□□□□□ -0.99
CNOT1-206ENST00000564557 FOXI1Q12951 378 aa8.85□□□□□ -0.99
CNOT1-206ENST00000564557 HIGD2BQ4VC39 106 aa8.85□□□□□ -0.99
CNOT1-206ENST00000564557 RNASE13Q5GAN3 156 aaKnown RBP8.85□□□□□ -0.99
CNOT1-206ENST00000564557 CD164L2Q6UWJ8 174 aa8.85□□□□□ -0.99
CNOT1-206ENST00000564557 SCXQ7RTU7 201 aa8.85□□□□□ -0.99
CNOT1-206ENST00000564557 SPANXA1Q9NS26 97 aa8.85□□□□□ -0.99
CNOT1-206ENST00000564557 IGHV1-58A0A0C4DH39 117 aa8.84□□□□□ -0.99
CNOT1-206ENST00000564557 IFI27P40305 119 aaPredicted RBP8.84□□□□□ -0.99
CNOT1-206ENST00000564557 RPL39P62891 51 aaKnown RBP8.84□□□□□ -0.99
CNOT1-206ENST00000564557 C15orf56Q8N910 161 aa8.84□□□□□ -0.99
CNOT1-206ENST00000564557 ZNF561-AS1K7EIQ3 104 aa8.83□□□□□ -1
CNOT1-206ENST00000564557 PLA2G1BP04054 148 aaKnown RBP8.83□□□□□ -1
CNOT1-206ENST00000564557 INAFM2P0DMQ5 153 aa8.83□□□□□ -1
CNOT1-206ENST00000564557 Q6ZUT4 128 aa8.83□□□□□ -1
CNOT1-206ENST00000564557 RPS10P5Q9NQ39 176 aa8.83□□□□□ -1
CNOT1-206ENST00000564557 GVQW2A0A096LPI5 108 aaPredicted RBP8.82□□□□□ -1
CNOT1-206ENST00000564557 PRSS47A8MTI9 375 aa8.82□□□□□ -1
CNOT1-206ENST00000564557 COX7A2LO14548 114 aa8.82□□□□□ -1
CNOT1-206ENST00000564557 Q8N8P6 123 aa8.82□□□□□ -1
CNOT1-206ENST00000564557 CIRBP-AS1Q8TBR5 109 aa8.82□□□□□ -1
CNOT1-206ENST00000564557 APOMO95445 188 aa8.81□□□□□ -1
CNOT1-206ENST00000564557 RHEBQ15382 184 aa8.81□□□□□ -1
CNOT1-206ENST00000564557 NDUFA5Q16718 116 aa8.81□□□□□ -1
CNOT1-206ENST00000564557 COX19Q49B96 90 aa8.81□□□□□ -1
CNOT1-206ENST00000564557 ORMDL2Q53FV1 153 aa8.81□□□□□ -1
CNOT1-206ENST00000564557 SDIM1Q6ZPB5 146 aa8.81□□□□□ -1
CNOT1-206ENST00000564557 SLPIP03973 132 aa8.8□□□□□ -1
CNOT1-206ENST00000564557 G0S2P27469 103 aa8.8□□□□□ -1
CNOT1-206ENST00000564557 MRPS36P82909 103 aaKnown RBP8.8□□□□□ -1
CNOT1-206ENST00000564557 NXT2Q9NPJ8 142 aaKnown RBP8.8□□□□□ -1
CNOT1-206ENST00000564557 CYSLTR1Q9Y271 337 aa8.8□□□□□ -1
CNOT1-206ENST00000564557 PKIGQ9Y2B9 76 aa8.8□□□□□ -1
CNOT1-206ENST00000564557 CARHSP1Q9Y2V2 147 aaKnown RBP8.8□□□□□ -1
CNOT1-206ENST00000564557 IFITM10A6NMD0 228 aa8.79□□□□□ -1
CNOT1-206ENST00000564557 K7EMI3 77 aa8.79□□□□□ -1
CNOT1-206ENST00000564557 KIAA1644Q3SXP7 199 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms