RNA–Protein interactions for RNA: ENST00000563835.1

PTPN9-203, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-203ENST00000563835 LINC00959A0A1B0GUT2 108 aa5.89□□□□□ -1.47
PTPN9-203ENST00000563835 C7orf77A4D0Y5 90 aa5.89□□□□□ -1.47
PTPN9-203ENST00000563835 CCL25O15444 150 aa5.89□□□□□ -1.47
PTPN9-203ENST00000563835 ZNF25P17030 456 aaPredicted RBP5.89□□□□□ -1.47
PTPN9-203ENST00000563835 XCL1P47992 114 aa5.89□□□□□ -1.47
PTPN9-203ENST00000563835 HNRNPA3P51991 378 aaKnown RBP5.89□□□□□ -1.47
PTPN9-203ENST00000563835 RNASE13Q5GAN3 156 aaKnown RBP5.89□□□□□ -1.47
PTPN9-203ENST00000563835 OR5A1Q8NGJ0 315 aa5.89□□□□□ -1.47
PTPN9-203ENST00000563835 AP5S1Q9NUS5 200 aa5.89□□□□□ -1.47
PTPN9-203ENST00000563835 IGHV3-64A0A075B6Q5 118 aa5.88□□□□□ -1.47
PTPN9-203ENST00000563835 RPL37AP61513 92 aaKnown RBP5.88□□□□□ -1.47
PTPN9-203ENST00000563835 SUMO2P61956 95 aaKnown RBP5.88□□□□□ -1.47
PTPN9-203ENST00000563835 CIRBPQ14011 172 aaKnown RBP5.88□□□□□ -1.47
PTPN9-203ENST00000563835 FAM104BQ5XKR9 115 aa5.88□□□□□ -1.47
PTPN9-203ENST00000563835 MRPL52Q86TS9 123 aaKnown RBP5.88□□□□□ -1.47
PTPN9-203ENST00000563835 LINC00526Q96FQ7 95 aa5.88□□□□□ -1.47
PTPN9-203ENST00000563835 TMEM101Q96IK0 257 aa5.88□□□□□ -1.47
PTPN9-203ENST00000563835 BTF3L4Q96K17 158 aa5.88□□□□□ -1.47
PTPN9-203ENST00000563835 GVQW2A0A096LPI5 108 aaPredicted RBP5.87□□□□□ -1.47
PTPN9-203ENST00000563835 A0A1B0GXF2 115 aa5.87□□□□□ -1.47
PTPN9-203ENST00000563835 FCER1GP30273 86 aa5.87□□□□□ -1.47
PTPN9-203ENST00000563835 Q6ZUT4 128 aa5.87□□□□□ -1.47
PTPN9-203ENST00000563835 SPACA4Q8TDM5 124 aa5.87□□□□□ -1.47
PTPN9-203ENST00000563835 SMDT1Q9H4I9 107 aa5.87□□□□□ -1.47
PTPN9-203ENST00000563835 CDC42SE2Q9NRR3 84 aa5.87□□□□□ -1.47
PTPN9-203ENST00000563835 UBE2D4Q9Y2X8 147 aa5.87□□□□□ -1.47
PTPN9-203ENST00000563835 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.86□□□□□ -1.47
PTPN9-203ENST00000563835 D6R8Y8 96 aa5.86□□□□□ -1.47
PTPN9-203ENST00000563835 J3QL48 77 aa5.86□□□□□ -1.47
PTPN9-203ENST00000563835 VCYO14598 125 aa5.86□□□□□ -1.47
PTPN9-203ENST00000563835 NPYP01303 97 aa5.86□□□□□ -1.47
PTPN9-203ENST00000563835 HBBP68871 147 aa5.86□□□□□ -1.47
PTPN9-203ENST00000563835 COX6A2Q02221 97 aa5.86□□□□□ -1.47
PTPN9-203ENST00000563835 ZNF664Q8N3J9 261 aa5.86□□□□□ -1.47
PTPN9-203ENST00000563835 A0A087WYN8 130 aa5.85□□□□□ -1.47
PTPN9-203ENST00000563835 IGKV2-24A0A0C4DH68 120 aa5.85□□□□□ -1.47
PTPN9-203ENST00000563835 PPP1R2P9O14990 202 aa5.85□□□□□ -1.47
PTPN9-203ENST00000563835 TNFRSF6BO95407 300 aa5.85□□□□□ -1.47
PTPN9-203ENST00000563835 CKS2P33552 79 aa5.85□□□□□ -1.47
PTPN9-203ENST00000563835 RPL39P62891 51 aaKnown RBP5.85□□□□□ -1.47
PTPN9-203ENST00000563835 CFAP161Q6P656 301 aa5.85□□□□□ -1.47
PTPN9-203ENST00000563835 PRSS3P2Q8NHM4 247 aa5.85□□□□□ -1.47
PTPN9-203ENST00000563835 KIR2DL4Q99706 377 aa5.85□□□□□ -1.47
PTPN9-203ENST00000563835 SMIM2Q9BVW6 85 aa5.85□□□□□ -1.47
PTPN9-203ENST00000563835 A0A096LNI7 61 aa5.84□□□□□ -1.47
PTPN9-203ENST00000563835 A0A1B0GW15 77 aa5.84□□□□□ -1.47
PTPN9-203ENST00000563835 KRTAP29-1A8MX34 341 aaPredicted RBP5.84□□□□□ -1.47
PTPN9-203ENST00000563835 PPP1R17O96001 155 aa5.84□□□□□ -1.47
PTPN9-203ENST00000563835 SS18Q15532 418 aa5.84□□□□□ -1.47
PTPN9-203ENST00000563835 CD164L2Q6UWJ8 174 aa5.84□□□□□ -1.47
PTPN9-203ENST00000563835 FAM104AQ969W3 186 aa5.84□□□□□ -1.47
PTPN9-203ENST00000563835 TRBV24-1A0A075B6N3 115 aa5.83□□□□□ -1.48
PTPN9-203ENST00000563835 TRAV13-1A0A0B4J241 112 aa5.83□□□□□ -1.48
PTPN9-203ENST00000563835 IGHV1-58A0A0C4DH39 117 aa5.83□□□□□ -1.48
PTPN9-203ENST00000563835 LINC00862A6NCI5 91 aa5.83□□□□□ -1.48
PTPN9-203ENST00000563835 TCAPO15273 167 aa5.83□□□□□ -1.48
PTPN9-203ENST00000563835 MAJINQ3KP22 176 aa5.83□□□□□ -1.48
PTPN9-203ENST00000563835 OPRPNQ99935 248 aaPredicted RBP5.83□□□□□ -1.48
PTPN9-203ENST00000563835 C20orf78Q9BR46 151 aa5.83□□□□□ -1.48
PTPN9-203ENST00000563835 F8W036 122 aa5.82□□□□□ -1.48
PTPN9-203ENST00000563835 PHOX2AO14813 284 aa5.82□□□□□ -1.48
PTPN9-203ENST00000563835 S100A8P05109 93 aa5.82□□□□□ -1.48
PTPN9-203ENST00000563835 RPL32P62910 135 aaKnown RBP5.82□□□□□ -1.48
PTPN9-203ENST00000563835 SLC7A5P1Q8MH63 180 aa5.82□□□□□ -1.48
PTPN9-203ENST00000563835 DPH3Q96FX2 82 aa5.82□□□□□ -1.48
PTPN9-203ENST00000563835 CARD19Q96LW7 228 aa5.82□□□□□ -1.48
PTPN9-203ENST00000563835 PLAC8Q9NZF1 115 aa5.82□□□□□ -1.48
PTPN9-203ENST00000563835 CSDC2Q9Y534 153 aaKnown RBP5.82□□□□□ -1.48
PTPN9-203ENST00000563835 HMCN2Q8NDA2 5059 aa5.81□□□□□ -1.48
PTPN9-203ENST00000563835 IGLV4-69A0A075B6H9 119 aa5.81□□□□□ -1.48
PTPN9-203ENST00000563835 COX7A2LO14548 114 aa5.81□□□□□ -1.48
PTPN9-203ENST00000563835 ADCYAP1P18509 176 aa5.81□□□□□ -1.48
PTPN9-203ENST00000563835 CLLU1Q5K131 121 aa5.81□□□□□ -1.48
PTPN9-203ENST00000563835 Q6ZRU5 148 aa5.81□□□□□ -1.48
PTPN9-203ENST00000563835 ATP5L2Q7Z4Y8 100 aa5.81□□□□□ -1.48
PTPN9-203ENST00000563835 C5orf38Q86SI9 138 aa5.81□□□□□ -1.48
PTPN9-203ENST00000563835 ORMDL3Q8N138 153 aa5.81□□□□□ -1.48
PTPN9-203ENST00000563835 TIMM21Q9BVV7 248 aa5.81□□□□□ -1.48
PTPN9-203ENST00000563835 C1orf196B1AJZ1 125 aa5.8□□□□□ -1.48
PTPN9-203ENST00000563835 ZNF561-AS1K7EIQ3 104 aa5.8□□□□□ -1.48
PTPN9-203ENST00000563835 MALP21145 153 aa5.8□□□□□ -1.48
PTPN9-203ENST00000563835 RAB14P61106 215 aa5.8□□□□□ -1.48
PTPN9-203ENST00000563835 SYCNQ0VAF6 134 aa5.8□□□□□ -1.48
PTPN9-203ENST00000563835 PNRC1Q12796 327 aaPredicted RBP5.8□□□□□ -1.48
PTPN9-203ENST00000563835 STPG4Q8N801 248 aa5.8□□□□□ -1.48
PTPN9-203ENST00000563835 PRELID3AQ96N28 172 aa5.8□□□□□ -1.48
PTPN9-203ENST00000563835 LOC389332A0A1B0GUA5 103 aa5.79□□□□□ -1.48
PTPN9-203ENST00000563835 PPBPP02775 128 aa5.79□□□□□ -1.48
PTPN9-203ENST00000563835 SMAGPQ0VAQ4 97 aa5.79□□□□□ -1.48
PTPN9-203ENST00000563835 TMEM136Q6ZRR5 245 aa5.79□□□□□ -1.48
PTPN9-203ENST00000563835 TMEM18Q96B42 140 aa5.79□□□□□ -1.48
PTPN9-203ENST00000563835 SPANXA1Q9NS26 97 aa5.79□□□□□ -1.48
PTPN9-203ENST00000563835 IFITM10A6NMD0 228 aa5.78□□□□□ -1.48
PTPN9-203ENST00000563835 OXTP01178 125 aa5.78□□□□□ -1.48
PTPN9-203ENST00000563835 MT-ND4LP03901 98 aa5.78□□□□□ -1.48
PTPN9-203ENST00000563835 SPAG11BQ08648 103 aa5.78□□□□□ -1.48
PTPN9-203ENST00000563835 COMMD7Q86VX2 200 aa5.78□□□□□ -1.48
PTPN9-203ENST00000563835 ANAPC16Q96DE5 110 aa5.78□□□□□ -1.48
PTPN9-203ENST00000563835 CAMK2N2Q96S95 79 aa5.78□□□□□ -1.48
PTPN9-203ENST00000563835 IGLV4-3A0A075B6K6 122 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms