RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 TRAV8-4A0A0B4J246 113 aa10.65□□□□□ -0.7
HDGFL3-203ENST00000563404 S100PP25815 95 aa10.65□□□□□ -0.7
HDGFL3-203ENST00000563404 TMEM243Q9BU79 118 aa10.65□□□□□ -0.7
HDGFL3-203ENST00000563404 TMEM191AQ9H0A3 160 aa10.65□□□□□ -0.7
HDGFL3-203ENST00000563404 H7C1H1 209 aa10.64□□□□□ -0.71
HDGFL3-203ENST00000563404 RASL11AQ6T310 242 aa10.64□□□□□ -0.71
HDGFL3-203ENST00000563404 SPACA4Q8TDM5 124 aa10.64□□□□□ -0.71
HDGFL3-203ENST00000563404 DPH3P1Q9H4G8 78 aa10.64□□□□□ -0.71
HDGFL3-203ENST00000563404 LRP2P98164 4655 aa10.64□□□□□ -0.71
HDGFL3-203ENST00000563404 A0A1B0GXF2 115 aa10.63□□□□□ -0.71
HDGFL3-203ENST00000563404 GATD1Q8NB37 220 aa10.63□□□□□ -0.71
HDGFL3-203ENST00000563404 HBBP68871 147 aa10.62□□□□□ -0.71
HDGFL3-203ENST00000563404 C15orf56Q8N910 161 aa10.62□□□□□ -0.71
HDGFL3-203ENST00000563404 RNF185Q96GF1 192 aa10.62□□□□□ -0.71
HDGFL3-203ENST00000563404 S100A1P23297 94 aa10.61□□□□□ -0.71
HDGFL3-203ENST00000563404 DPH3Q96FX2 82 aa10.61□□□□□ -0.71
HDGFL3-203ENST00000563404 NIT2Q9NQR4 276 aa10.61□□□□□ -0.71
HDGFL3-203ENST00000563404 AP5S1Q9NUS5 200 aa10.61□□□□□ -0.71
HDGFL3-203ENST00000563404 PLAC8Q9NZF1 115 aa10.61□□□□□ -0.71
HDGFL3-203ENST00000563404 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.6□□□□□ -0.71
HDGFL3-203ENST00000563404 PHOX2AO14813 284 aa10.6□□□□□ -0.71
HDGFL3-203ENST00000563404 COX19Q49B96 90 aa10.6□□□□□ -0.71
HDGFL3-203ENST00000563404 TRBV24-1A0A075B6N3 115 aa10.59□□□□□ -0.71
HDGFL3-203ENST00000563404 GAGE12HA6NDE8 117 aa10.59□□□□□ -0.71
HDGFL3-203ENST00000563404 AMTP48728 403 aa10.59□□□□□ -0.71
HDGFL3-203ENST00000563404 MRPL54Q6P161 138 aaKnown RBP10.59□□□□□ -0.71
HDGFL3-203ENST00000563404 SMCO4Q9NRQ5 59 aa10.59□□□□□ -0.71
HDGFL3-203ENST00000563404 UBE2L6O14933 153 aa10.58□□□□□ -0.72
HDGFL3-203ENST00000563404 RAB4AP20338 218 aa10.58□□□□□ -0.72
HDGFL3-203ENST00000563404 CAMPP49913 170 aa10.58□□□□□ -0.72
HDGFL3-203ENST00000563404 COX6A2Q02221 97 aa10.58□□□□□ -0.72
HDGFL3-203ENST00000563404 FAM104BQ5XKR9 115 aa10.58□□□□□ -0.72
HDGFL3-203ENST00000563404 IGKV3OR2-268A0A0C4DH90 116 aa10.57□□□□□ -0.72
HDGFL3-203ENST00000563404 COTL1Q14019 142 aa10.57□□□□□ -0.72
HDGFL3-203ENST00000563404 MRAP2Q96G30 205 aa10.57□□□□□ -0.72
HDGFL3-203ENST00000563404 TRAV26-2A0A0B4J265 109 aa10.56□□□□□ -0.72
HDGFL3-203ENST00000563404 PPP1R17O96001 155 aa10.56□□□□□ -0.72
HDGFL3-203ENST00000563404 HIGD2BQ4VC39 106 aa10.56□□□□□ -0.72
HDGFL3-203ENST00000563404 PRSS3P2Q8NHM4 247 aa10.56□□□□□ -0.72
HDGFL3-203ENST00000563404 GNB1LQ9BYB4 327 aa10.56□□□□□ -0.72
HDGFL3-203ENST00000563404 PPBPP02775 128 aa10.55□□□□□ -0.72
HDGFL3-203ENST00000563404 ODF1Q14990 250 aa10.55□□□□□ -0.72
HDGFL3-203ENST00000563404 YPEL4Q96NS1 127 aa10.55□□□□□ -0.72
HDGFL3-203ENST00000563404 RPS10P46783 165 aaKnown RBP10.54□□□□□ -0.72
HDGFL3-203ENST00000563404 MAJINQ3KP22 176 aa10.54□□□□□ -0.72
HDGFL3-203ENST00000563404 AMN1Q8IY45 258 aa10.54□□□□□ -0.72
HDGFL3-203ENST00000563404 IGKV2-24A0A0C4DH68 120 aa10.53□□□□□ -0.72
HDGFL3-203ENST00000563404 ATP6V1G1O75348 118 aa10.53□□□□□ -0.72
HDGFL3-203ENST00000563404 MT-ND6P03923 174 aa10.53□□□□□ -0.72
HDGFL3-203ENST00000563404 CFAP161Q6P656 301 aa10.53□□□□□ -0.72
HDGFL3-203ENST00000563404 TMEM136Q6ZRR5 245 aa10.53□□□□□ -0.72
HDGFL3-203ENST00000563404 C7orf33Q8WU49 177 aa10.53□□□□□ -0.72
HDGFL3-203ENST00000563404 CHCHD10Q8WYQ3 142 aaPredicted RBP10.53□□□□□ -0.72
HDGFL3-203ENST00000563404 RPL39LQ96EH5 51 aaKnown RBP10.53□□□□□ -0.72
HDGFL3-203ENST00000563404 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.52□□□□□ -0.73
HDGFL3-203ENST00000563404 TRBV6-5A0A0K0K1A5 114 aa10.52□□□□□ -0.73
HDGFL3-203ENST00000563404 IGKV2-29A2NJV5 120 aaPredicted RBP10.52□□□□□ -0.73
HDGFL3-203ENST00000563404 PRR3P79522 188 aaKnown RBP10.52□□□□□ -0.73
HDGFL3-203ENST00000563404 MRPL51Q4U2R6 128 aaKnown RBP10.52□□□□□ -0.73
HDGFL3-203ENST00000563404 LINC01600Q96MT4 127 aa10.52□□□□□ -0.73
HDGFL3-203ENST00000563404 GVQW2A0A096LPI5 108 aaPredicted RBP10.51□□□□□ -0.73
HDGFL3-203ENST00000563404 FOXI1Q12951 378 aa10.51□□□□□ -0.73
HDGFL3-203ENST00000563404 STPG4Q8N801 248 aa10.51□□□□□ -0.73
HDGFL3-203ENST00000563404 LAMTOR2Q9Y2Q5 125 aa10.51□□□□□ -0.73
HDGFL3-203ENST00000563404 A0A096LNI7 61 aa10.5□□□□□ -0.73
HDGFL3-203ENST00000563404 TGIF2-C20orf24A0A0A6YYL0 155 aa10.5□□□□□ -0.73
HDGFL3-203ENST00000563404 CKS2P33552 79 aa10.5□□□□□ -0.73
HDGFL3-203ENST00000563404 CBLN2Q8IUK8 224 aa10.5□□□□□ -0.73
HDGFL3-203ENST00000563404 FGF6P10767 208 aa10.49□□□□□ -0.73
HDGFL3-203ENST00000563404 AMMECR1LQ6DCA0 310 aa10.49□□□□□ -0.73
HDGFL3-203ENST00000563404 RNASEKQ6P5S7 137 aaKnown RBP10.49□□□□□ -0.73
HDGFL3-203ENST00000563404 ORMDL3Q8N138 153 aa10.49□□□□□ -0.73
HDGFL3-203ENST00000563404 C20orf78Q9BR46 151 aa10.49□□□□□ -0.73
HDGFL3-203ENST00000563404 NCR2O95944 276 aa10.48□□□□□ -0.73
HDGFL3-203ENST00000563404 APCSP02743 223 aa10.48□□□□□ -0.73
HDGFL3-203ENST00000563404 RPL32P62910 135 aaKnown RBP10.48□□□□□ -0.73
HDGFL3-203ENST00000563404 NRACQ8N912 160 aa10.48□□□□□ -0.73
HDGFL3-203ENST00000563404 PRSS47A8MTI9 375 aa10.47□□□□□ -0.73
HDGFL3-203ENST00000563404 H7C423 109 aa10.47□□□□□ -0.73
HDGFL3-203ENST00000563404 POLR2KP53803 58 aaKnown RBP10.47□□□□□ -0.73
HDGFL3-203ENST00000563404 LINC00526Q96FQ7 95 aa10.47□□□□□ -0.73
HDGFL3-203ENST00000563404 ST20Q9HBF5 79 aa10.47□□□□□ -0.73
HDGFL3-203ENST00000563404 SDHAF1A6NFY7 115 aa10.46□□□□□ -0.73
HDGFL3-203ENST00000563404 COLCA2A8K830 154 aa10.46□□□□□ -0.73
HDGFL3-203ENST00000563404 D6R8Y8 96 aa10.46□□□□□ -0.73
HDGFL3-203ENST00000563404 GAS8-AS1O95177 125 aa10.46□□□□□ -0.73
HDGFL3-203ENST00000563404 OR5A1Q8NGJ0 315 aa10.46□□□□□ -0.73
HDGFL3-203ENST00000563404 TRBV27A0A0K0K1C4 114 aa10.45□□□□□ -0.74
HDGFL3-203ENST00000563404 VCYO14598 125 aa10.45□□□□□ -0.74
HDGFL3-203ENST00000563404 TNFRSF6BO95407 300 aa10.45□□□□□ -0.74
HDGFL3-203ENST00000563404 XCL1P47992 114 aa10.45□□□□□ -0.74
HDGFL3-203ENST00000563404 KRTAP10-8P60410 259 aa10.45□□□□□ -0.74
HDGFL3-203ENST00000563404 SUMO2P61956 95 aaKnown RBP10.45□□□□□ -0.74
HDGFL3-203ENST00000563404 PRELID3AQ96N28 172 aa10.45□□□□□ -0.74
HDGFL3-203ENST00000563404 TRAPPC1Q9Y5R8 145 aa10.45□□□□□ -0.74
HDGFL3-203ENST00000563404 A0A0J9YXV3 536 aa10.44□□□□□ -0.74
HDGFL3-203ENST00000563404 LINC00959A0A1B0GUT2 108 aa10.44□□□□□ -0.74
HDGFL3-203ENST00000563404 TCAPO15273 167 aa10.44□□□□□ -0.74
HDGFL3-203ENST00000563404 CCL25O15444 150 aa10.44□□□□□ -0.74
HDGFL3-203ENST00000563404 FABP9Q0Z7S8 132 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms