RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 PRSS47A8MTI9 375 aa5.6□□□□□ -1.51
UBR1-204ENST00000563239 PHOX2AO14813 284 aa5.6□□□□□ -1.51
UBR1-204ENST00000563239 LORP23490 312 aaPredicted RBP5.6□□□□□ -1.51
UBR1-204ENST00000563239 RNASEKQ6P5S7 137 aaKnown RBP5.6□□□□□ -1.51
UBR1-204ENST00000563239 MRPL52Q86TS9 123 aaKnown RBP5.6□□□□□ -1.51
UBR1-204ENST00000563239 ORMDL3Q8N138 153 aa5.6□□□□□ -1.51
UBR1-204ENST00000563239 NTN5Q8WTR8 489 aaPredicted RBP5.6□□□□□ -1.51
UBR1-204ENST00000563239 FAM104AQ969W3 186 aa5.6□□□□□ -1.51
UBR1-204ENST00000563239 PRELID3AQ96N28 172 aa5.6□□□□□ -1.51
UBR1-204ENST00000563239 SMIM2Q9BVW6 85 aa5.6□□□□□ -1.51
UBR1-204ENST00000563239 TRAV9-1A0A075B6T8 112 aa5.59□□□□□ -1.51
UBR1-204ENST00000563239 TRAV8-4A0A0B4J246 113 aa5.59□□□□□ -1.51
UBR1-204ENST00000563239 CDK2AP2O75956 126 aa5.59□□□□□ -1.51
UBR1-204ENST00000563239 ZNF25P17030 456 aaPredicted RBP5.59□□□□□ -1.51
UBR1-204ENST00000563239 FCER1GP30273 86 aa5.59□□□□□ -1.51
UBR1-204ENST00000563239 RHEBQ15382 184 aa5.59□□□□□ -1.51
UBR1-204ENST00000563239 AMMECR1LQ6DCA0 310 aa5.59□□□□□ -1.51
UBR1-204ENST00000563239 CDC42SE2Q9NRR3 84 aa5.59□□□□□ -1.51
UBR1-204ENST00000563239 UBE2D4Q9Y2X8 147 aa5.59□□□□□ -1.51
UBR1-204ENST00000563239 FAT1Q14517 4588 aa5.58□□□□□ -1.52
UBR1-204ENST00000563239 IGLV5-52A0A0A0MRZ9 124 aa5.58□□□□□ -1.52
UBR1-204ENST00000563239 USP17L23D6RBM5 183 aa5.58□□□□□ -1.52
UBR1-204ENST00000563239 TCAPO15273 167 aa5.58□□□□□ -1.52
UBR1-204ENST00000563239 HLA-DQA1P01909 254 aa5.58□□□□□ -1.52
UBR1-204ENST00000563239 GCSHP23434 173 aa5.58□□□□□ -1.52
UBR1-204ENST00000563239 KIR2DL4Q99706 377 aa5.58□□□□□ -1.52
UBR1-204ENST00000563239 RPS10P5Q9NQ39 176 aa5.58□□□□□ -1.52
UBR1-204ENST00000563239 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.57□□□□□ -1.52
UBR1-204ENST00000563239 IGKV3OR2-268A0A0C4DH90 116 aa5.57□□□□□ -1.52
UBR1-204ENST00000563239 APOC3P02656 99 aa5.57□□□□□ -1.52
UBR1-204ENST00000563239 PRSS1P07477 247 aa5.57□□□□□ -1.52
UBR1-204ENST00000563239 XGP55808 180 aa5.57□□□□□ -1.52
UBR1-204ENST00000563239 RPL39P62891 51 aaKnown RBP5.57□□□□□ -1.52
UBR1-204ENST00000563239 KIAA1644Q3SXP7 199 aa5.57□□□□□ -1.52
UBR1-204ENST00000563239 ZNF664Q8N3J9 261 aa5.57□□□□□ -1.52
UBR1-204ENST00000563239 OR5A1Q8NGJ0 315 aa5.57□□□□□ -1.52
UBR1-204ENST00000563239 TIMM21Q9BVV7 248 aa5.57□□□□□ -1.52
UBR1-204ENST00000563239 MRPL18Q9H0U6 180 aaKnown RBP5.57□□□□□ -1.52
UBR1-204ENST00000563239 LAMTOR2Q9Y2Q5 125 aa5.57□□□□□ -1.52
UBR1-204ENST00000563239 CSDC2Q9Y534 153 aaKnown RBP5.57□□□□□ -1.52
UBR1-204ENST00000563239 LOC389332A0A1B0GUA5 103 aa5.56□□□□□ -1.52
UBR1-204ENST00000563239 LINC00959A0A1B0GUT2 108 aa5.56□□□□□ -1.52
UBR1-204ENST00000563239 GAGE12HA6NDE8 117 aa5.56□□□□□ -1.52
UBR1-204ENST00000563239 S100PP25815 95 aa5.56□□□□□ -1.52
UBR1-204ENST00000563239 LINC01620Q4KN68 170 aa5.56□□□□□ -1.52
UBR1-204ENST00000563239 SLC7A5P1Q8MH63 180 aa5.56□□□□□ -1.52
UBR1-204ENST00000563239 CHCHD10Q8WYQ3 142 aaPredicted RBP5.56□□□□□ -1.52
UBR1-204ENST00000563239 TMEM101Q96IK0 257 aa5.56□□□□□ -1.52
UBR1-204ENST00000563239 YPEL4Q96NS1 127 aa5.56□□□□□ -1.52
UBR1-204ENST00000563239 GNB1LQ9BYB4 327 aa5.56□□□□□ -1.52
UBR1-204ENST00000563239 FAM30AQ9NZY2 134 aa5.56□□□□□ -1.52
UBR1-204ENST00000563239 TGIF2-C20orf24A0A0A6YYL0 155 aa5.55□□□□□ -1.52
UBR1-204ENST00000563239 SLPIP03973 132 aa5.55□□□□□ -1.52
UBR1-204ENST00000563239 FOXI1Q12951 378 aa5.55□□□□□ -1.52
UBR1-204ENST00000563239 RNASE13Q5GAN3 156 aaKnown RBP5.55□□□□□ -1.52
UBR1-204ENST00000563239 Q6ZUT4 128 aa5.55□□□□□ -1.52
UBR1-204ENST00000563239 SVBPQ8N300 66 aa5.55□□□□□ -1.52
UBR1-204ENST00000563239 Q8N8P6 123 aa5.55□□□□□ -1.52
UBR1-204ENST00000563239 C15orf56Q8N910 161 aa5.55□□□□□ -1.52
UBR1-204ENST00000563239 OPRPNQ99935 248 aaPredicted RBP5.55□□□□□ -1.52
UBR1-204ENST00000563239 KRTAP4-5Q9BYR2 181 aa5.55□□□□□ -1.52
UBR1-204ENST00000563239 MAP1LC3AQ9H492 121 aa5.55□□□□□ -1.52
UBR1-204ENST00000563239 CCL25O15444 150 aa5.54□□□□□ -1.52
UBR1-204ENST00000563239 SNAPINO95295 136 aa5.54□□□□□ -1.52
UBR1-204ENST00000563239 IFI27P40305 119 aaPredicted RBP5.54□□□□□ -1.52
UBR1-204ENST00000563239 C14orf177Q52M58 125 aa5.54□□□□□ -1.52
UBR1-204ENST00000563239 Q6ZSA8 131 aa5.54□□□□□ -1.52
UBR1-204ENST00000563239 ALKBH7Q9BT30 221 aaPredicted RBP5.54□□□□□ -1.52
UBR1-204ENST00000563239 RAB5AP20339 215 aa5.53□□□□□ -1.52
UBR1-204ENST00000563239 XCL1P47992 114 aa5.53□□□□□ -1.52
UBR1-204ENST00000563239 MRPS36P82909 103 aaKnown RBP5.53□□□□□ -1.52
UBR1-204ENST00000563239 NDUFA5Q16718 116 aa5.53□□□□□ -1.52
UBR1-204ENST00000563239 COX19Q49B96 90 aa5.53□□□□□ -1.52
UBR1-204ENST00000563239 DGAT2L7PQ6IED9 249 aa5.53□□□□□ -1.52
UBR1-204ENST00000563239 TMEM18Q96B42 140 aa5.53□□□□□ -1.52
UBR1-204ENST00000563239 SPANXA1Q9NS26 97 aa5.53□□□□□ -1.52
UBR1-204ENST00000563239 VPS13BQ7Z7G8 4022 aa5.52□□□□□ -1.53
UBR1-204ENST00000563239 LINC01546A6NGU7 62 aa5.52□□□□□ -1.53
UBR1-204ENST00000563239 MT-ND6P03923 174 aa5.52□□□□□ -1.53
UBR1-204ENST00000563239 CNBPP62633 177 aaKnown RBP5.52□□□□□ -1.53
UBR1-204ENST00000563239 HAMPP81172 84 aa5.52□□□□□ -1.53
UBR1-204ENST00000563239 SMAGPQ0VAQ4 97 aa5.52□□□□□ -1.53
UBR1-204ENST00000563239 SS18Q15532 418 aa5.52□□□□□ -1.53
UBR1-204ENST00000563239 CD164L2Q6UWJ8 174 aa5.52□□□□□ -1.53
UBR1-204ENST00000563239 NXT2Q9NPJ8 142 aaKnown RBP5.52□□□□□ -1.53
UBR1-204ENST00000563239 PYGO1Q9Y3Y4 419 aa5.52□□□□□ -1.53
UBR1-204ENST00000563239 IGLV4-3A0A075B6K6 122 aa5.51□□□□□ -1.53
UBR1-204ENST00000563239 TRAV13-1A0A0B4J241 112 aa5.51□□□□□ -1.53
UBR1-204ENST00000563239 hDV102S1A0JD36 115 aa5.51□□□□□ -1.53
UBR1-204ENST00000563239 IGIPA6NJ69 53 aa5.51□□□□□ -1.53
UBR1-204ENST00000563239 C1orf196B1AJZ1 125 aa5.51□□□□□ -1.53
UBR1-204ENST00000563239 K7EMI3 77 aa5.51□□□□□ -1.53
UBR1-204ENST00000563239 FABP9Q0Z7S8 132 aa5.51□□□□□ -1.53
UBR1-204ENST00000563239 ORMDL2Q53FV1 153 aa5.51□□□□□ -1.53
UBR1-204ENST00000563239 C2orf66Q6UXQ4 117 aa5.51□□□□□ -1.53
UBR1-204ENST00000563239 Q8N1X5 172 aa5.51□□□□□ -1.53
UBR1-204ENST00000563239 C9orf163Q8N9P6 203 aa5.51□□□□□ -1.53
UBR1-204ENST00000563239 SRRM2Q9UQ35 2752 aaKnown RBP5.5□□□□□ -1.53
UBR1-204ENST00000563239 GVQW2A0A096LPI5 108 aaPredicted RBP5.5□□□□□ -1.53
UBR1-204ENST00000563239 HIGD2BQ4VC39 106 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms