RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 LINC00862A6NCI5 91 aa11.51□□□□□ -0.57
CMTM3-204ENST00000562357 CKS2P33552 79 aa11.5□□□□□ -0.57
CMTM3-204ENST00000562357 HBBP68871 147 aa11.5□□□□□ -0.57
CMTM3-204ENST00000562357 SS18Q15532 418 aa11.5□□□□□ -0.57
CMTM3-204ENST00000562357 XCL1P47992 114 aa11.49□□□□□ -0.57
CMTM3-204ENST00000562357 MRPL51Q4U2R6 128 aaKnown RBP11.49□□□□□ -0.57
CMTM3-204ENST00000562357 MRPL54Q6P161 138 aaKnown RBP11.49□□□□□ -0.57
CMTM3-204ENST00000562357 MRPL52Q86TS9 123 aaKnown RBP11.49□□□□□ -0.57
CMTM3-204ENST00000562357 NRACQ8N912 160 aa11.49□□□□□ -0.57
CMTM3-204ENST00000562357 TMEM18Q96B42 140 aa11.49□□□□□ -0.57
CMTM3-204ENST00000562357 TCAPO15273 167 aa11.48□□□□□ -0.57
CMTM3-204ENST00000562357 C15orf56Q8N910 161 aa11.48□□□□□ -0.57
CMTM3-204ENST00000562357 DPH3Q96FX2 82 aa11.48□□□□□ -0.57
CMTM3-204ENST00000562357 C20orf78Q9BR46 151 aa11.48□□□□□ -0.57
CMTM3-204ENST00000562357 SRRM2Q9UQ35 2752 aaKnown RBP11.47□□□□□ -0.57
CMTM3-204ENST00000562357 LINC00959A0A1B0GUT2 108 aa11.47□□□□□ -0.57
CMTM3-204ENST00000562357 CCL25O15444 150 aa11.47□□□□□ -0.57
CMTM3-204ENST00000562357 HIGD2BQ4VC39 106 aa11.47□□□□□ -0.57
CMTM3-204ENST00000562357 SDIM1Q6ZPB5 146 aa11.47□□□□□ -0.57
CMTM3-204ENST00000562357 ZNF664Q8N3J9 261 aa11.47□□□□□ -0.57
CMTM3-204ENST00000562357 CDC42SE2Q9NRR3 84 aa11.47□□□□□ -0.57
CMTM3-204ENST00000562357 DMBT1Q9UGM3 2413 aaPredicted RBP11.47□□□□□ -0.57
CMTM3-204ENST00000562357 FLG2Q5D862 2391 aaPredicted RBP11.47□□□□□ -0.57
CMTM3-204ENST00000562357 PNRC1Q12796 327 aaPredicted RBP11.46□□□□□ -0.57
CMTM3-204ENST00000562357 GVQW2A0A096LPI5 108 aaPredicted RBP11.45□□□□□ -0.58
CMTM3-204ENST00000562357 PPBPP02775 128 aa11.45□□□□□ -0.58
CMTM3-204ENST00000562357 FOXI1Q12951 378 aa11.45□□□□□ -0.58
CMTM3-204ENST00000562357 ATP5L2Q7Z4Y8 100 aa11.45□□□□□ -0.58
CMTM3-204ENST00000562357 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.45□□□□□ -0.58
CMTM3-204ENST00000562357 TRBV24-1A0A075B6N3 115 aa11.44□□□□□ -0.58
CMTM3-204ENST00000562357 IGHV1-58A0A0C4DH39 117 aa11.44□□□□□ -0.58
CMTM3-204ENST00000562357 D6R8Y8 96 aa11.44□□□□□ -0.58
CMTM3-204ENST00000562357 J3QL48 77 aa11.44□□□□□ -0.58
CMTM3-204ENST00000562357 TNFRSF6BO95407 300 aa11.44□□□□□ -0.58
CMTM3-204ENST00000562357 PKIGQ9Y2B9 76 aa11.44□□□□□ -0.58
CMTM3-204ENST00000562357 CSDC2Q9Y534 153 aaKnown RBP11.44□□□□□ -0.58
CMTM3-204ENST00000562357 VPS13BQ7Z7G8 4022 aa11.44□□□□□ -0.58
CMTM3-204ENST00000562357 UBR4Q5T4S7 5183 aa11.44□□□□□ -0.58
CMTM3-204ENST00000562357 A0A1B0GXF2 115 aa11.43□□□□□ -0.58
CMTM3-204ENST00000562357 MT-ND4LP03901 98 aa11.43□□□□□ -0.58
CMTM3-204ENST00000562357 RPL37AP61513 92 aaKnown RBP11.43□□□□□ -0.58
CMTM3-204ENST00000562357 RPL32P62910 135 aaKnown RBP11.43□□□□□ -0.58
CMTM3-204ENST00000562357 CD164L2Q6UWJ8 174 aa11.43□□□□□ -0.58
CMTM3-204ENST00000562357 UBE2D4Q9Y2X8 147 aa11.43□□□□□ -0.58
CMTM3-204ENST00000562357 C1orf196B1AJZ1 125 aa11.42□□□□□ -0.58
CMTM3-204ENST00000562357 PHOX2AO14813 284 aa11.42□□□□□ -0.58
CMTM3-204ENST00000562357 SLPIP03973 132 aa11.42□□□□□ -0.58
CMTM3-204ENST00000562357 SMIM2Q9BVW6 85 aa11.42□□□□□ -0.58
CMTM3-204ENST00000562357 ORMDL3Q8N138 153 aa11.41□□□□□ -0.58
CMTM3-204ENST00000562357 ANAPC16Q96DE5 110 aa11.41□□□□□ -0.58
CMTM3-204ENST00000562357 TIMM21Q9BVV7 248 aa11.41□□□□□ -0.58
CMTM3-204ENST00000562357 ZNF561-AS1K7EIQ3 104 aa11.4□□□□□ -0.58
CMTM3-204ENST00000562357 MALP21145 153 aa11.4□□□□□ -0.58
CMTM3-204ENST00000562357 CIRBPQ14011 172 aaKnown RBP11.4□□□□□ -0.58
CMTM3-204ENST00000562357 TRAV13-1A0A0B4J241 112 aa11.39□□□□□ -0.59
CMTM3-204ENST00000562357 PANO1I0J062 215 aa11.39□□□□□ -0.59
CMTM3-204ENST00000562357 NPYP01303 97 aa11.39□□□□□ -0.59
CMTM3-204ENST00000562357 RAB5AP20339 215 aa11.39□□□□□ -0.59
CMTM3-204ENST00000562357 COX6A2Q02221 97 aa11.39□□□□□ -0.59
CMTM3-204ENST00000562357 COX7A2LO14548 114 aa11.38□□□□□ -0.59
CMTM3-204ENST00000562357 CHTF8P0CG12 524 aa11.38□□□□□ -0.59
CMTM3-204ENST00000562357 RNASE13Q5GAN3 156 aaKnown RBP11.38□□□□□ -0.59
CMTM3-204ENST00000562357 CLLU1Q5K131 121 aa11.38□□□□□ -0.59
CMTM3-204ENST00000562357 TMEM136Q6ZRR5 245 aa11.38□□□□□ -0.59
CMTM3-204ENST00000562357 Q6ZUT4 128 aa11.38□□□□□ -0.59
CMTM3-204ENST00000562357 SPACA4Q8TDM5 124 aa11.38□□□□□ -0.59
CMTM3-204ENST00000562357 PRELID3AQ96N28 172 aa11.38□□□□□ -0.59
CMTM3-204ENST00000562357 MYCBP2O75592 4640 aa11.37□□□□□ -0.59
CMTM3-204ENST00000562357 A0A087WYN8 130 aa11.37□□□□□ -0.59
CMTM3-204ENST00000562357 CARD19Q96LW7 228 aa11.37□□□□□ -0.59
CMTM3-204ENST00000562357 SPANXA1Q9NS26 97 aa11.37□□□□□ -0.59
CMTM3-204ENST00000562357 IGKV2-24A0A0C4DH68 120 aa11.36□□□□□ -0.59
CMTM3-204ENST00000562357 LAMTOR2Q9Y2Q5 125 aa11.36□□□□□ -0.59
CMTM3-204ENST00000562357 APOMO95445 188 aa11.35□□□□□ -0.59
CMTM3-204ENST00000562357 KRTAP10-4P60372 401 aaPredicted RBP11.35□□□□□ -0.59
CMTM3-204ENST00000562357 RPL39P62891 51 aaKnown RBP11.35□□□□□ -0.59
CMTM3-204ENST00000562357 MAJINQ3KP22 176 aa11.35□□□□□ -0.59
CMTM3-204ENST00000562357 C7orf33Q8WU49 177 aa11.35□□□□□ -0.59
CMTM3-204ENST00000562357 LINC00474Q9P2X8 69 aa11.35□□□□□ -0.59
CMTM3-204ENST00000562357 KRTAP29-1A8MX34 341 aaPredicted RBP11.34□□□□□ -0.59
CMTM3-204ENST00000562357 SYCNQ0VAF6 134 aa11.34□□□□□ -0.59
CMTM3-204ENST00000562357 PRSS3P2Q8NHM4 247 aa11.34□□□□□ -0.59
CMTM3-204ENST00000562357 LINC00526Q96FQ7 95 aa11.34□□□□□ -0.59
CMTM3-204ENST00000562357 MAP1LC3AQ9H492 121 aa11.34□□□□□ -0.59
CMTM3-204ENST00000562357 IFI27P40305 119 aaPredicted RBP11.33□□□□□ -0.6
CMTM3-204ENST00000562357 UQCC3Q6UW78 93 aa11.33□□□□□ -0.6
CMTM3-204ENST00000562357 PLAC8Q9NZF1 115 aa11.33□□□□□ -0.6
CMTM3-204ENST00000562357 MRPS36P82909 103 aaKnown RBP11.32□□□□□ -0.6
CMTM3-204ENST00000562357 IFITM10A6NMD0 228 aa11.31□□□□□ -0.6
CMTM3-204ENST00000562357 C5orf38Q86SI9 138 aa11.31□□□□□ -0.6
CMTM3-204ENST00000562357 HERC1Q15751 4861 aa11.31□□□□□ -0.6
CMTM3-204ENST00000562357 IGLV4-69A0A075B6H9 119 aa11.3□□□□□ -0.6
CMTM3-204ENST00000562357 LOC389332A0A1B0GUA5 103 aa11.3□□□□□ -0.6
CMTM3-204ENST00000562357 OXTP01178 125 aa11.3□□□□□ -0.6
CMTM3-204ENST00000562357 STPG4Q8N801 248 aa11.3□□□□□ -0.6
CMTM3-204ENST00000562357 CAMK2N2Q96S95 79 aa11.3□□□□□ -0.6
CMTM3-204ENST00000562357 CTDSP1Q9GZU7 261 aa11.3□□□□□ -0.6
CMTM3-204ENST00000562357 A0A096LNI7 61 aa11.29□□□□□ -0.6
CMTM3-204ENST00000562357 SPAG11BQ08648 103 aa11.29□□□□□ -0.6
CMTM3-204ENST00000562357 IMMP2LQ96T52 175 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms