RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 MRPL23Q16540 153 aaKnown RBP10.09□□□□□ -0.79
VPS9D1-202ENST00000561976 ZNF702PQ9H963 129 aa10.09□□□□□ -0.79
VPS9D1-202ENST00000561976 IGHV3OR16-12A0A075B7B8 117 aa10.08□□□□□ -0.8
VPS9D1-202ENST00000561976 HERVK_113P63121 156 aa10.08□□□□□ -0.8
VPS9D1-202ENST00000561976 C11orf72Q8NBR9 251 aa10.08□□□□□ -0.8
VPS9D1-202ENST00000561976 IGLV5-45A0A087WSX0 123 aa10.08□□□□□ -0.8
VPS9D1-202ENST00000561976 FAM240AA0A1B0GVK7 77 aa10.08□□□□□ -0.8
VPS9D1-202ENST00000561976 A8MTW9 85 aa10.08□□□□□ -0.8
VPS9D1-202ENST00000561976 KHDC1LQ5JSQ8 128 aa10.08□□□□□ -0.8
VPS9D1-202ENST00000561976 MEIG1Q5JSS6 88 aa10.08□□□□□ -0.8
VPS9D1-202ENST00000561976 DYNLRB2Q8TF09 96 aa10.08□□□□□ -0.8
VPS9D1-202ENST00000561976 INSP01308 110 aa10.07□□□□□ -0.8
VPS9D1-202ENST00000561976 DEFB121Q5J5C9 76 aa10.07□□□□□ -0.8
VPS9D1-202ENST00000561976 MAP6D1Q9H9H5 199 aa10.07□□□□□ -0.8
VPS9D1-202ENST00000561976 TRAV13-1A0A0B4J241 112 aa10.07□□□□□ -0.8
VPS9D1-202ENST00000561976 RS1O15537 224 aa10.07□□□□□ -0.8
VPS9D1-202ENST00000561976 LINC00242Q5T6M2 205 aa10.07□□□□□ -0.8
VPS9D1-202ENST00000561976 NDUFA7O95182 113 aa10.06□□□□□ -0.8
VPS9D1-202ENST00000561976 PRORYQ9H606 182 aa10.06□□□□□ -0.8
VPS9D1-202ENST00000561976 DSCR9P59020 149 aa10.06□□□□□ -0.8
VPS9D1-202ENST00000561976 BEAN1Q3B7T3 259 aa10.06□□□□□ -0.8
VPS9D1-202ENST00000561976 PRIMA1Q86XR5 153 aa10.06□□□□□ -0.8
VPS9D1-202ENST00000561976 PEMTQ9UBM1 199 aa10.06□□□□□ -0.8
VPS9D1-202ENST00000561976 COX7A2LO14548 114 aa10.05□□□□□ -0.8
VPS9D1-202ENST00000561976 XCL2Q9UBD3 114 aa10.05□□□□□ -0.8
VPS9D1-202ENST00000561976 USP9YO00507 2555 aaPredicted RBP10.05□□□□□ -0.8
VPS9D1-202ENST00000561976 IGLV5-39A0A0G2JS06 123 aa10.05□□□□□ -0.8
VPS9D1-202ENST00000561976 LINC00694P0DN24 101 aa10.05□□□□□ -0.8
VPS9D1-202ENST00000561976 COPS9Q8WXC6 57 aa10.05□□□□□ -0.8
VPS9D1-202ENST00000561976 TRGV1A0A0A0MS02 117 aa10.04□□□□□ -0.8
VPS9D1-202ENST00000561976 SOSTDC1Q6X4U4 206 aa10.04□□□□□ -0.8
VPS9D1-202ENST00000561976 SMIM1B2RUZ4 78 aa10.03□□□□□ -0.8
VPS9D1-202ENST00000561976 Q8N2B8 174 aa10.03□□□□□ -0.8
VPS9D1-202ENST00000561976 CHCHD5Q9BSY4 110 aa10.03□□□□□ -0.8
VPS9D1-202ENST00000561976 J3QLI3 93 aa10.03□□□□□ -0.8
VPS9D1-202ENST00000561976 Q6YL49 198 aa10.03□□□□□ -0.8
VPS9D1-202ENST00000561976 RPL36AP83881 106 aaKnown RBP10.02□□□□□ -0.81
VPS9D1-202ENST00000561976 HIST2H2BDQ6DRA6 164 aa10.02□□□□□ -0.81
VPS9D1-202ENST00000561976 RPL36ALQ969Q0 106 aaKnown RBP10.02□□□□□ -0.81
VPS9D1-202ENST00000561976 ZANQ9Y493 2812 aa10.01□□□□□ -0.81
VPS9D1-202ENST00000561976 ACYP1P07311 99 aa10.01□□□□□ -0.81
VPS9D1-202ENST00000561976 PIEZO1Q92508 2521 aa10.01□□□□□ -0.81
VPS9D1-202ENST00000561976 TRBV7-7A0A0K0K1E9 115 aa10.01□□□□□ -0.81
VPS9D1-202ENST00000561976 BAALC-AS2P0C853 105 aa10□□□□□ -0.81
VPS9D1-202ENST00000561976 DAZ2Q13117 558 aaKnown RBP10□□□□□ -0.81
VPS9D1-202ENST00000561976 DAZ4Q86SG3 579 aaKnown RBP10□□□□□ -0.81
VPS9D1-202ENST00000561976 DAZ3Q9NR90 486 aaKnown RBP10□□□□□ -0.81
VPS9D1-202ENST00000561976 DEFB114Q30KQ6 69 aa10□□□□□ -0.81
VPS9D1-202ENST00000561976 STHQ8IWL8 128 aa9.99□□□□□ -0.81
VPS9D1-202ENST00000561976 FLNCQ14315 2725 aa9.99□□□□□ -0.81
VPS9D1-202ENST00000561976 K7EQD1 137 aa9.99□□□□□ -0.81
VPS9D1-202ENST00000561976 NTM-AS1Q6ZSK4 140 aa9.99□□□□□ -0.81
VPS9D1-202ENST00000561976 DOPEY1Q5JWR5 2465 aa9.99□□□□□ -0.81
VPS9D1-202ENST00000561976 FAM236AA0A1B0GUQ0 79 aa9.98□□□□□ -0.81
VPS9D1-202ENST00000561976 FAM236BA0A1B0GV22 79 aa9.98□□□□□ -0.81
VPS9D1-202ENST00000561976 TRACP01848 142 aa9.98□□□□□ -0.81
VPS9D1-202ENST00000561976 C4orf3Q8WVX3 66 aa9.98□□□□□ -0.81
VPS9D1-202ENST00000561976 UTP20O75691 2785 aaKnown RBP9.98□□□□□ -0.81
VPS9D1-202ENST00000561976 UBE2L6O14933 153 aa9.97□□□□□ -0.81
VPS9D1-202ENST00000561976 Q6ZTI0 123 aa9.97□□□□□ -0.81
VPS9D1-202ENST00000561976 CDC42SE2Q9NRR3 84 aa9.97□□□□□ -0.81
VPS9D1-202ENST00000561976 CSDC2Q9Y534 153 aaKnown RBP9.97□□□□□ -0.81
VPS9D1-202ENST00000561976 POLQO75417 2590 aa9.97□□□□□ -0.81
VPS9D1-202ENST00000561976 USP9XQ93008 2570 aaPredicted RBP9.97□□□□□ -0.81
VPS9D1-202ENST00000561976 FAM19A3Q7Z5A8 133 aa9.97□□□□□ -0.81
VPS9D1-202ENST00000561976 C1orf158Q8N1D5 194 aa9.97□□□□□ -0.81
VPS9D1-202ENST00000561976 CSMD2Q7Z408 3487 aa9.97□□□□□ -0.81
VPS9D1-202ENST00000561976 ANKRD17O75179 2603 aaKnown RBP9.97□□□□□ -0.81
VPS9D1-202ENST00000561976 MYO9AB2RTY4 2548 aa9.97□□□□□ -0.81
VPS9D1-202ENST00000561976 MXRA5Q9NR99 2828 aa9.97□□□□□ -0.81
VPS9D1-202ENST00000561976 A0A096LNT2 108 aa9.97□□□□□ -0.81
VPS9D1-202ENST00000561976 F5H768 121 aa9.97□□□□□ -0.81
VPS9D1-202ENST00000561976 TRBV10-1A0A0K0K1A3 114 aa9.96□□□□□ -0.81
VPS9D1-202ENST00000561976 C3orf56Q8N813 242 aa9.96□□□□□ -0.81
VPS9D1-202ENST00000561976 SMCR5Q8TEV8 140 aa9.96□□□□□ -0.81
VPS9D1-202ENST00000561976 FAM218AQ96MZ4 157 aa9.96□□□□□ -0.81
VPS9D1-202ENST00000561976 PPDPFQ9H3Y8 114 aa9.96□□□□□ -0.81
VPS9D1-202ENST00000561976 ODF3L2Q3SX64 289 aa9.96□□□□□ -0.82
VPS9D1-202ENST00000561976 CFAP46Q8IYW2 2715 aa9.96□□□□□ -0.82
VPS9D1-202ENST00000561976 C2CD3Q4AC94 2353 aa9.96□□□□□ -0.82
VPS9D1-202ENST00000561976 NOTCH3Q9UM47 2321 aa9.96□□□□□ -0.82
VPS9D1-202ENST00000561976 PKD1L2Q7Z442 2459 aa9.95□□□□□ -0.82
VPS9D1-202ENST00000561976 LINC00643Q86TS7 51 aa9.95□□□□□ -0.82
VPS9D1-202ENST00000561976 Q9HAA7 133 aa9.95□□□□□ -0.82
VPS9D1-202ENST00000561976 TOMM7Q9P0U1 55 aa9.95□□□□□ -0.82
VPS9D1-202ENST00000561976 CACNA1AO00555 2505 aa9.95□□□□□ -0.82
VPS9D1-202ENST00000561976 CRPP02741 224 aa9.95□□□□□ -0.82
VPS9D1-202ENST00000561976 HIST2H2BCQ6DN03 193 aa9.95□□□□□ -0.82
VPS9D1-202ENST00000561976 IMUPQ9GZP8 106 aa9.95□□□□□ -0.82
VPS9D1-202ENST00000561976 IGKV3OR2-268A0A0C4DH90 116 aa9.94□□□□□ -0.82
VPS9D1-202ENST00000561976 Q96MF0 132 aa9.94□□□□□ -0.82
VPS9D1-202ENST00000561976 TRAV13-2A0A0B4J235 113 aa9.94□□□□□ -0.82
VPS9D1-202ENST00000561976 FSHBP01225 129 aa9.94□□□□□ -0.82
VPS9D1-202ENST00000561976 TMEM243Q9BU79 118 aa9.94□□□□□ -0.82
VPS9D1-202ENST00000561976 GAGE2AQ6NT46 116 aa9.93□□□□□ -0.82
VPS9D1-202ENST00000561976 NOP10Q9NPE3 64 aaKnown RBP9.93□□□□□ -0.82
VPS9D1-202ENST00000561976 IGHV4-31P0DP07 118 aa9.93□□□□□ -0.82
VPS9D1-202ENST00000561976 MIR7-3HGQ8N6C7 128 aa9.93□□□□□ -0.82
VPS9D1-202ENST00000561976 IL17DQ8TAD2 202 aa9.93□□□□□ -0.82
VPS9D1-202ENST00000561976 WNK1Q9H4A3 2382 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms