RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 CHAC1Q9BUX1 264 aa5.36□□□□□ -1.55
GINS3-204ENST00000561952 DPH3P1Q9H4G8 78 aa5.36□□□□□ -1.55
GINS3-204ENST00000561952 LRP1Q07954 4544 aaKnown RBP5.35□□□□□ -1.55
GINS3-204ENST00000561952 IGLV4-60A0A075B6I1 120 aa5.35□□□□□ -1.55
GINS3-204ENST00000561952 F2Z2F3 143 aa5.35□□□□□ -1.55
GINS3-204ENST00000561952 HIST1H2BKO60814 126 aa5.35□□□□□ -1.55
GINS3-204ENST00000561952 TRGC2P03986 189 aa5.35□□□□□ -1.55
GINS3-204ENST00000561952 HIST1H2BJP06899 126 aa5.35□□□□□ -1.55
GINS3-204ENST00000561952 HIST1H2BOP23527 126 aa5.35□□□□□ -1.55
GINS3-204ENST00000561952 HIST1H2BBP33778 126 aa5.35□□□□□ -1.55
GINS3-204ENST00000561952 HIST1H2BDP58876 126 aa5.35□□□□□ -1.55
GINS3-204ENST00000561952 HIST1H2BCP62807 126 aa5.35□□□□□ -1.55
GINS3-204ENST00000561952 REG3AQ06141 175 aa5.35□□□□□ -1.55
GINS3-204ENST00000561952 HIST2H2BEQ16778 126 aa5.35□□□□□ -1.55
GINS3-204ENST00000561952 IQCJQ1A5X6 159 aa5.35□□□□□ -1.55
GINS3-204ENST00000561952 COX19Q49B96 90 aa5.35□□□□□ -1.55
GINS3-204ENST00000561952 CT83Q5H943 113 aa5.35□□□□□ -1.55
GINS3-204ENST00000561952 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.35□□□□□ -1.55
GINS3-204ENST00000561952 C20orf203Q8NBC4 194 aa5.35□□□□□ -1.55
GINS3-204ENST00000561952 HIST1H2BHQ93079 126 aa5.35□□□□□ -1.55
GINS3-204ENST00000561952 HIST1H2BNQ99877 126 aa5.35□□□□□ -1.55
GINS3-204ENST00000561952 HIST1H2BMQ99879 126 aa5.35□□□□□ -1.55
GINS3-204ENST00000561952 GFRA4Q9GZZ7 299 aa5.35□□□□□ -1.55
GINS3-204ENST00000561952 RPP21Q9H633 154 aaKnown RBP5.35□□□□□ -1.55
GINS3-204ENST00000561952 FAT3Q8TDW7 4589 aa5.35□□□□□ -1.55
GINS3-204ENST00000561952 hDV102S1A0JD36 115 aa5.34□□□□□ -1.55
GINS3-204ENST00000561952 FAM231BA6NCW3 169 aa5.34□□□□□ -1.55
GINS3-204ENST00000561952 GATCO43716 136 aaKnown RBP5.34□□□□□ -1.55
GINS3-204ENST00000561952 S100A6P06703 90 aa5.34□□□□□ -1.55
GINS3-204ENST00000561952 CTRLP40313 264 aa5.34□□□□□ -1.55
GINS3-204ENST00000561952 AMTP48728 403 aa5.34□□□□□ -1.55
GINS3-204ENST00000561952 FOXA3P55318 350 aaPredicted RBP5.34□□□□□ -1.55
GINS3-204ENST00000561952 SNRPEP62304 92 aaKnown RBP5.34□□□□□ -1.55
GINS3-204ENST00000561952 COTL1Q14019 142 aa5.34□□□□□ -1.55
GINS3-204ENST00000561952 COA6Q5JTJ3 125 aaKnown RBP5.34□□□□□ -1.55
GINS3-204ENST00000561952 RPL39LQ96EH5 51 aaKnown RBP5.34□□□□□ -1.55
GINS3-204ENST00000561952 NIT2Q9NQR4 276 aa5.34□□□□□ -1.55
GINS3-204ENST00000561952 PRR34Q9NV39 138 aa5.34□□□□□ -1.55
GINS3-204ENST00000561952 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.33□□□□□ -1.56
GINS3-204ENST00000561952 IGKV2-29A2NJV5 120 aaPredicted RBP5.33□□□□□ -1.56
GINS3-204ENST00000561952 KRTAP26-1Q6PEX3 210 aa5.33□□□□□ -1.56
GINS3-204ENST00000561952 GATD1Q8NB37 220 aa5.33□□□□□ -1.56
GINS3-204ENST00000561952 TSKUQ8WUA8 353 aa5.33□□□□□ -1.56
GINS3-204ENST00000561952 GTSF1Q8WW33 167 aa5.33□□□□□ -1.56
GINS3-204ENST00000561952 PGLYRP4Q96LB8 373 aa5.33□□□□□ -1.56
GINS3-204ENST00000561952 GNB1LQ9BYB4 327 aa5.33□□□□□ -1.56
GINS3-204ENST00000561952 A8MWL6 223 aa5.32□□□□□ -1.56
GINS3-204ENST00000561952 PANO1I0J062 215 aa5.32□□□□□ -1.56
GINS3-204ENST00000561952 MT-ND6P03923 174 aa5.32□□□□□ -1.56
GINS3-204ENST00000561952 S100A8P05109 93 aa5.32□□□□□ -1.56
GINS3-204ENST00000561952 RPL37AP61513 92 aaKnown RBP5.32□□□□□ -1.56
GINS3-204ENST00000561952 FABP9Q0Z7S8 132 aa5.32□□□□□ -1.56
GINS3-204ENST00000561952 WDR73Q6P4I2 378 aa5.32□□□□□ -1.56
GINS3-204ENST00000561952 RNASEKQ6P5S7 137 aaKnown RBP5.32□□□□□ -1.56
GINS3-204ENST00000561952 SMIM15Q7Z3B0 74 aa5.32□□□□□ -1.56
GINS3-204ENST00000561952 GAGE12HA6NDE8 117 aa5.31□□□□□ -1.56
GINS3-204ENST00000561952 APCSP02743 223 aa5.31□□□□□ -1.56
GINS3-204ENST00000561952 NDUFA6P56556 154 aa5.31□□□□□ -1.56
GINS3-204ENST00000561952 AMMECR1LQ6DCA0 310 aa5.31□□□□□ -1.56
GINS3-204ENST00000561952 TMEM136Q6ZRR5 245 aa5.31□□□□□ -1.56
GINS3-204ENST00000561952 ATP5L2Q7Z4Y8 100 aa5.31□□□□□ -1.56
GINS3-204ENST00000561952 C9orf163Q8N9P6 203 aa5.31□□□□□ -1.56
GINS3-204ENST00000561952 NUP35Q8NFH5 326 aa5.31□□□□□ -1.56
GINS3-204ENST00000561952 AP5S1Q9NUS5 200 aa5.31□□□□□ -1.56
GINS3-204ENST00000561952 NAT8BQ9UHF3 227 aa5.31□□□□□ -1.56
GINS3-204ENST00000561952 TRAPPC1Q9Y5R8 145 aa5.31□□□□□ -1.56
GINS3-204ENST00000561952 TRAV8-4A0A0B4J246 113 aa5.3□□□□□ -1.56
GINS3-204ENST00000561952 A0A1B0GUV1 79 aa5.3□□□□□ -1.56
GINS3-204ENST00000561952 A0A1B0GXF2 115 aa5.3□□□□□ -1.56
GINS3-204ENST00000561952 CHTF8P0CG12 524 aa5.3□□□□□ -1.56
GINS3-204ENST00000561952 KRTAP10-4P60372 401 aaPredicted RBP5.3□□□□□ -1.56
GINS3-204ENST00000561952 HIGD2BQ4VC39 106 aa5.3□□□□□ -1.56
GINS3-204ENST00000561952 DGAT2L7PQ6IED9 249 aa5.3□□□□□ -1.56
GINS3-204ENST00000561952 KRTAP5-3Q6L8H2 238 aa5.3□□□□□ -1.56
GINS3-204ENST00000561952 LINC00518Q8N0U6 118 aa5.3□□□□□ -1.56
GINS3-204ENST00000561952 HIST3H2BBQ8N257 126 aa5.3□□□□□ -1.56
GINS3-204ENST00000561952 DPH3Q96FX2 82 aa5.3□□□□□ -1.56
GINS3-204ENST00000561952 CNFNQ9BYD5 112 aa5.3□□□□□ -1.56
GINS3-204ENST00000561952 SDHAF1A6NFY7 115 aa5.29□□□□□ -1.56
GINS3-204ENST00000561952 IFITM10A6NMD0 228 aa5.29□□□□□ -1.56
GINS3-204ENST00000561952 HIGD1CA8MV81 97 aa5.29□□□□□ -1.56
GINS3-204ENST00000561952 GAS8-AS1O95177 125 aa5.29□□□□□ -1.56
GINS3-204ENST00000561952 PMCHP20382 165 aa5.29□□□□□ -1.56
GINS3-204ENST00000561952 HNRNPA3P51991 378 aaKnown RBP5.29□□□□□ -1.56
GINS3-204ENST00000561952 BORCS7Q96B45 105 aa5.29□□□□□ -1.56
GINS3-204ENST00000561952 IGHV3-64A0A075B6Q5 118 aa5.28□□□□□ -1.56
GINS3-204ENST00000561952 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.28□□□□□ -1.56
GINS3-204ENST00000561952 KRTAP29-1A8MX34 341 aaPredicted RBP5.28□□□□□ -1.56
GINS3-204ENST00000561952 EIF4EBP3O60516 100 aaPredicted RBP5.28□□□□□ -1.56
GINS3-204ENST00000561952 NCR2O95944 276 aa5.28□□□□□ -1.56
GINS3-204ENST00000561952 SLPIP03973 132 aa5.28□□□□□ -1.56
GINS3-204ENST00000561952 SMIM6P0DI80 62 aa5.28□□□□□ -1.56
GINS3-204ENST00000561952 FGF6P10767 208 aa5.28□□□□□ -1.56
GINS3-204ENST00000561952 ESDP10768 282 aa5.28□□□□□ -1.56
GINS3-204ENST00000561952 C15orf56Q8N910 161 aa5.28□□□□□ -1.56
GINS3-204ENST00000561952 CHCHD10Q8WYQ3 142 aaPredicted RBP5.28□□□□□ -1.56
GINS3-204ENST00000561952 KRTAP9-3Q9BYQ3 159 aa5.28□□□□□ -1.56
GINS3-204ENST00000561952 IGKV2-24A0A0C4DH68 120 aa5.27□□□□□ -1.57
GINS3-204ENST00000561952 A0A1B0GW15 77 aa5.27□□□□□ -1.57
GINS3-204ENST00000561952 SMKR1H3BMG3 65 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms