RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 LGALSLQ3ZCW2 172 aaPredicted RBP1.94□□□□□ -2.1
HERC1-215ENST00000561436 FAM74A1Q5RGS3 127 aa1.94□□□□□ -2.1
HERC1-215ENST00000561436 MRPL52Q86TS9 123 aaKnown RBP1.94□□□□□ -2.1
HERC1-215ENST00000561436 AMN1Q8IY45 258 aa1.94□□□□□ -2.1
HERC1-215ENST00000561436 MRPS26Q9BYN8 205 aaKnown RBP1.94□□□□□ -2.1
HERC1-215ENST00000561436 KCNIP2Q9NS61 270 aa1.94□□□□□ -2.1
HERC1-215ENST00000561436 MRPL16Q9NX20 251 aaKnown RBP1.94□□□□□ -2.1
HERC1-215ENST00000561436 PAIP2BQ9ULR5 123 aaKnown RBP1.94□□□□□ -2.1
HERC1-215ENST00000561436 URGCP-MRPS24S4R325 110 aa1.94□□□□□ -2.1
HERC1-215ENST00000561436 TRBV10-1A0A0K0K1A3 114 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 LINC00854A0A1B0GVQ3 168 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 A8MWV9 139 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 SLC17A3O00476 420 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 IGHV3-53P01767 116 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 IAPPP10997 89 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 KRTAP10-10P60014 251 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 VBP1P61758 197 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 CNBPP62633 177 aaKnown RBP1.93□□□□□ -2.1
HERC1-215ENST00000561436 HBG1P69891 147 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 HBG2P69892 147 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 NEDD8Q15843 81 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 TMEM97Q5BJF2 176 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 SPINK6Q6UWN8 80 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 DPPA3Q6W0C5 159 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 FAM19A1Q7Z5A9 133 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 C9orf163Q8N9P6 203 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.93□□□□□ -2.1
HERC1-215ENST00000561436 CMTM2Q8TAZ6 248 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 TVP23CQ96ET8 276 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 ZC2HC1AQ96GY0 325 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 FMC1Q96HJ9 113 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 UQCC1Q9NVA1 299 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 ZNF706Q9Y5V0 76 aaPredicted RBP1.93□□□□□ -2.1
HERC1-215ENST00000561436 FSIP2Q5CZC0 6907 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 TNCP24821 2201 aa1.93□□□□□ -2.1
HERC1-215ENST00000561436 MYCBP2O75592 4640 aa1.92□□□□□ -2.1
HERC1-215ENST00000561436 A0A087WX48 190 aa1.92□□□□□ -2.1
HERC1-215ENST00000561436 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.92□□□□□ -2.1
HERC1-215ENST00000561436 NAP1L6A6NFF2 107 aa1.92□□□□□ -2.1
HERC1-215ENST00000561436 IGHV3-30P01768 117 aa1.92□□□□□ -2.1
HERC1-215ENST00000561436 IGHV3-33P01772 117 aa1.92□□□□□ -2.1
HERC1-215ENST00000561436 NBEAP1P0C6P0 100 aa1.92□□□□□ -2.1
HERC1-215ENST00000561436 LINC00694P0DN24 101 aa1.92□□□□□ -2.1
HERC1-215ENST00000561436 IGHV3-30-3P0DP02 117 aa1.92□□□□□ -2.1
HERC1-215ENST00000561436 IGHV3-30-5P0DP03 117 aa1.92□□□□□ -2.1
HERC1-215ENST00000561436 PVALBP20472 110 aaPredicted RBP1.92□□□□□ -2.1
HERC1-215ENST00000561436 TAS2R45P59539 299 aa1.92□□□□□ -2.1
HERC1-215ENST00000561436 HAMPP81172 84 aa1.92□□□□□ -2.1
HERC1-215ENST00000561436 BAXQ07812 192 aa1.92□□□□□ -2.1
HERC1-215ENST00000561436 SLC38A11Q08AI6 406 aa1.92□□□□□ -2.1
HERC1-215ENST00000561436 MIAQ16674 131 aa1.92□□□□□ -2.1
HERC1-215ENST00000561436 CFAP126Q5VTH2 177 aa1.92□□□□□ -2.1
HERC1-215ENST00000561436 SDIM1Q6ZPB5 146 aa1.92□□□□□ -2.1
HERC1-215ENST00000561436 NIT1Q86X76 327 aa1.92□□□□□ -2.1
HERC1-215ENST00000561436 C3orf22Q8N5N4 141 aa1.92□□□□□ -2.1
HERC1-215ENST00000561436 MGST2Q99735 147 aa1.92□□□□□ -2.1
HERC1-215ENST00000561436 MIXL1Q9H2W2 232 aa1.92□□□□□ -2.1
HERC1-215ENST00000561436 LINC00474Q9P2X8 69 aa1.92□□□□□ -2.1
HERC1-215ENST00000561436 NAGKQ9UJ70 344 aa1.92□□□□□ -2.1
HERC1-215ENST00000561436 VPS13BQ7Z7G8 4022 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 IGHV3-64A0A075B6Q5 118 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 C9orf170A2RU37 121 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 H3BP45 60 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 M0QXV9 152 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 M0R3E3 92 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 SSSCA1O60232 199 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 SFTA3P0C7M3 94 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 METTL15P1P0C7V9 234 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 SULT1A1P50225 295 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 NCS1P62166 190 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 LSM3P62310 102 aaKnown RBP1.91□□□□□ -2.1
HERC1-215ENST00000561436 CD164Q04900 197 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 PPP1R1AQ13522 171 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 WFDC2Q14508 124 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 SAPCD1Q5SSQ6 148 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 AMMECR1LQ6DCA0 310 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 Q6ZQT7 251 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 STX12Q86Y82 276 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 ZNF664Q8N3J9 261 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 TOMM5Q8N4H5 51 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 Q8TAT8 98 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 RAB2BQ8WUD1 216 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 ASB13Q8WXK3 278 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 DIRAS2Q96HU8 199 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 PARD6GQ9BYG4 376 aaPredicted RBP1.91□□□□□ -2.1
HERC1-215ENST00000561436 MED28Q9H204 178 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 PLAC8Q9NZF1 115 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 OR5AC2Q9NZP5 309 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 CRCT1Q9UGL9 99 aa1.91□□□□□ -2.1
HERC1-215ENST00000561436 SRRM2Q9UQ35 2752 aaKnown RBP1.91□□□□□ -2.1
HERC1-215ENST00000561436 A0A1B0GXF2 115 aa1.9□□□□□ -2.11
HERC1-215ENST00000561436 HSBP1L1C9JCN9 74 aa1.9□□□□□ -2.11
HERC1-215ENST00000561436 C17orf112F2Z3M2 114 aa1.9□□□□□ -2.11
HERC1-215ENST00000561436 H3BQ85 93 aa1.9□□□□□ -2.11
HERC1-215ENST00000561436 NDUFB6O95139 128 aa1.9□□□□□ -2.11
HERC1-215ENST00000561436 CRPP02741 224 aa1.9□□□□□ -2.11
HERC1-215ENST00000561436 ASIPP42127 132 aa1.9□□□□□ -2.11
HERC1-215ENST00000561436 TMBIM6P55061 237 aa1.9□□□□□ -2.11
HERC1-215ENST00000561436 S100A10P60903 97 aa1.9□□□□□ -2.11
HERC1-215ENST00000561436 RRAS2P62070 204 aaPredicted RBP1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms