RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 LINC00526Q96FQ7 95 aa8.08□□□□□ -1.12
CHRNA3-208ENST00000561128 LINC00959A0A1B0GUT2 108 aa8.07□□□□□ -1.12
CHRNA3-208ENST00000561128 C7orf77A4D0Y5 90 aa8.07□□□□□ -1.12
CHRNA3-208ENST00000561128 CCL25O15444 150 aa8.07□□□□□ -1.12
CHRNA3-208ENST00000561128 NPYP01303 97 aa8.07□□□□□ -1.12
CHRNA3-208ENST00000561128 XCL1P47992 114 aa8.07□□□□□ -1.12
CHRNA3-208ENST00000561128 CIRBPQ14011 172 aaKnown RBP8.07□□□□□ -1.12
CHRNA3-208ENST00000561128 Q6ZUT4 128 aa8.07□□□□□ -1.12
CHRNA3-208ENST00000561128 PLA2G1BP04054 148 aaKnown RBP8.06□□□□□ -1.12
CHRNA3-208ENST00000561128 ZNF25P17030 456 aaPredicted RBP8.06□□□□□ -1.12
CHRNA3-208ENST00000561128 IFITM2Q01629 132 aa8.06□□□□□ -1.12
CHRNA3-208ENST00000561128 CLRN3Q8NCR9 226 aa8.06□□□□□ -1.12
CHRNA3-208ENST00000561128 CDC42SE2Q9NRR3 84 aa8.06□□□□□ -1.12
CHRNA3-208ENST00000561128 UBE2D4Q9Y2X8 147 aa8.06□□□□□ -1.12
CHRNA3-208ENST00000561128 GVQW2A0A096LPI5 108 aaPredicted RBP8.05□□□□□ -1.12
CHRNA3-208ENST00000561128 D6R8Y8 96 aa8.05□□□□□ -1.12
CHRNA3-208ENST00000561128 RPL39P62891 51 aaKnown RBP8.05□□□□□ -1.12
CHRNA3-208ENST00000561128 HBBP68871 147 aa8.05□□□□□ -1.12
CHRNA3-208ENST00000561128 SMDT1Q9H4I9 107 aa8.05□□□□□ -1.12
CHRNA3-208ENST00000561128 DMBT1Q9UGM3 2413 aaPredicted RBP8.04□□□□□ -1.12
CHRNA3-208ENST00000561128 TNFRSF6BO95407 300 aa8.04□□□□□ -1.12
CHRNA3-208ENST00000561128 ADCYAP1P18509 176 aa8.04□□□□□ -1.12
CHRNA3-208ENST00000561128 ZNF664Q8N3J9 261 aa8.04□□□□□ -1.12
CHRNA3-208ENST00000561128 PRSS3P2Q8NHM4 247 aa8.04□□□□□ -1.12
CHRNA3-208ENST00000561128 SPACA4Q8TDM5 124 aa8.04□□□□□ -1.12
CHRNA3-208ENST00000561128 HERC1Q15751 4861 aa8.04□□□□□ -1.12
CHRNA3-208ENST00000561128 IGHV3-64A0A075B6Q5 118 aa8.03□□□□□ -1.12
CHRNA3-208ENST00000561128 VCYO14598 125 aa8.03□□□□□ -1.12
CHRNA3-208ENST00000561128 FCER1GP30273 86 aa8.03□□□□□ -1.12
CHRNA3-208ENST00000561128 BTF3L4Q96K17 158 aa8.03□□□□□ -1.12
CHRNA3-208ENST00000561128 OPRPNQ99935 248 aaPredicted RBP8.03□□□□□ -1.12
CHRNA3-208ENST00000561128 SMIM2Q9BVW6 85 aa8.03□□□□□ -1.12
CHRNA3-208ENST00000561128 TRBV24-1A0A075B6N3 115 aa8.02□□□□□ -1.13
CHRNA3-208ENST00000561128 A0A087WYN8 130 aa8.02□□□□□ -1.13
CHRNA3-208ENST00000561128 TCAPO15273 167 aa8.02□□□□□ -1.13
CHRNA3-208ENST00000561128 CKS2P33552 79 aa8.02□□□□□ -1.13
CHRNA3-208ENST00000561128 RPL37AP61513 92 aaKnown RBP8.02□□□□□ -1.13
CHRNA3-208ENST00000561128 COX6A2Q02221 97 aa8.02□□□□□ -1.13
CHRNA3-208ENST00000561128 TMEM101Q96IK0 257 aa8.02□□□□□ -1.13
CHRNA3-208ENST00000561128 AP5S1Q9NUS5 200 aa8.02□□□□□ -1.13
CHRNA3-208ENST00000561128 A0A096LNI7 61 aa8.01□□□□□ -1.13
CHRNA3-208ENST00000561128 A0A1B0GW15 77 aa8.01□□□□□ -1.13
CHRNA3-208ENST00000561128 RPL32P62910 135 aaKnown RBP8.01□□□□□ -1.13
CHRNA3-208ENST00000561128 CLLU1Q5K131 121 aa8□□□□□ -1.13
CHRNA3-208ENST00000561128 KIR2DL4Q99706 377 aa8□□□□□ -1.13
CHRNA3-208ENST00000561128 C20orf78Q9BR46 151 aa8□□□□□ -1.13
CHRNA3-208ENST00000561128 TRAV13-1A0A0B4J241 112 aa7.99□□□□□ -1.13
CHRNA3-208ENST00000561128 IGKV2-24A0A0C4DH68 120 aa7.99□□□□□ -1.13
CHRNA3-208ENST00000561128 LINC00862A6NCI5 91 aa7.99□□□□□ -1.13
CHRNA3-208ENST00000561128 KRTAP29-1A8MX34 341 aaPredicted RBP7.99□□□□□ -1.13
CHRNA3-208ENST00000561128 PPP1R2P9O14990 202 aa7.99□□□□□ -1.13
CHRNA3-208ENST00000561128 CD164L2Q6UWJ8 174 aa7.99□□□□□ -1.13
CHRNA3-208ENST00000561128 PLAC8Q9NZF1 115 aa7.99□□□□□ -1.13
CHRNA3-208ENST00000561128 CSDC2Q9Y534 153 aaKnown RBP7.99□□□□□ -1.13
CHRNA3-208ENST00000561128 PKHD1L1Q86WI1 4243 aa7.99□□□□□ -1.13
CHRNA3-208ENST00000561128 LRP1Q07954 4544 aaKnown RBP7.98□□□□□ -1.13
CHRNA3-208ENST00000561128 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.98□□□□□ -1.13
CHRNA3-208ENST00000561128 IGHV1-58A0A0C4DH39 117 aa7.98□□□□□ -1.13
CHRNA3-208ENST00000561128 PPP1R17O96001 155 aa7.98□□□□□ -1.13
CHRNA3-208ENST00000561128 SS18Q15532 418 aa7.98□□□□□ -1.13
CHRNA3-208ENST00000561128 CFAP161Q6P656 301 aa7.98□□□□□ -1.13
CHRNA3-208ENST00000561128 ATP5L2Q7Z4Y8 100 aa7.98□□□□□ -1.13
CHRNA3-208ENST00000561128 TIMM21Q9BVV7 248 aa7.98□□□□□ -1.13
CHRNA3-208ENST00000561128 F8W036 122 aa7.97□□□□□ -1.13
CHRNA3-208ENST00000561128 C5orf38Q86SI9 138 aa7.97□□□□□ -1.13
CHRNA3-208ENST00000561128 CARD19Q96LW7 228 aa7.97□□□□□ -1.13
CHRNA3-208ENST00000561128 PRELID3AQ96N28 172 aa7.97□□□□□ -1.13
CHRNA3-208ENST00000561128 IGLV4-69A0A075B6H9 119 aa7.96□□□□□ -1.14
CHRNA3-208ENST00000561128 J3QL48 77 aa7.96□□□□□ -1.14
CHRNA3-208ENST00000561128 PHOX2AO14813 284 aa7.96□□□□□ -1.14
CHRNA3-208ENST00000561128 PNRC1Q12796 327 aaPredicted RBP7.96□□□□□ -1.14
CHRNA3-208ENST00000561128 MAJINQ3KP22 176 aa7.96□□□□□ -1.14
CHRNA3-208ENST00000561128 ZC2HC1BQ5TFG8 222 aa7.96□□□□□ -1.14
CHRNA3-208ENST00000561128 TMEM136Q6ZRR5 245 aa7.96□□□□□ -1.14
CHRNA3-208ENST00000561128 Q6ZRU5 148 aa7.96□□□□□ -1.14
CHRNA3-208ENST00000561128 ORMDL3Q8N138 153 aa7.96□□□□□ -1.14
CHRNA3-208ENST00000561128 LOC389332A0A1B0GUA5 103 aa7.95□□□□□ -1.14
CHRNA3-208ENST00000561128 S100A8P05109 93 aa7.95□□□□□ -1.14
CHRNA3-208ENST00000561128 RAB14P61106 215 aa7.95□□□□□ -1.14
CHRNA3-208ENST00000561128 IGLV4-3A0A075B6K6 122 aa7.94□□□□□ -1.14
CHRNA3-208ENST00000561128 C1orf196B1AJZ1 125 aa7.94□□□□□ -1.14
CHRNA3-208ENST00000561128 COX7A2LO14548 114 aa7.94□□□□□ -1.14
CHRNA3-208ENST00000561128 PPBPP02775 128 aa7.94□□□□□ -1.14
CHRNA3-208ENST00000561128 MT-ND4LP03901 98 aa7.94□□□□□ -1.14
CHRNA3-208ENST00000561128 SYCNQ0VAF6 134 aa7.94□□□□□ -1.14
CHRNA3-208ENST00000561128 STPG4Q8N801 248 aa7.94□□□□□ -1.14
CHRNA3-208ENST00000561128 ANAPC16Q96DE5 110 aa7.94□□□□□ -1.14
CHRNA3-208ENST00000561128 SPANXA1Q9NS26 97 aa7.94□□□□□ -1.14
CHRNA3-208ENST00000561128 A0A0J9YXV3 536 aa7.93□□□□□ -1.14
CHRNA3-208ENST00000561128 TMEM218A2RU14 115 aa7.93□□□□□ -1.14
CHRNA3-208ENST00000561128 MRPS36P82909 103 aaKnown RBP7.93□□□□□ -1.14
CHRNA3-208ENST00000561128 LINC00173Q6ZV60 143 aa7.93□□□□□ -1.14
CHRNA3-208ENST00000561128 FAT3Q8TDW7 4589 aa7.93□□□□□ -1.14
CHRNA3-208ENST00000561128 IGHV3OR16-9A0A0B4J2B5 98 aa7.92□□□□□ -1.14
CHRNA3-208ENST00000561128 IFITM10A6NMD0 228 aa7.92□□□□□ -1.14
CHRNA3-208ENST00000561128 MT1HL1P0DM35 61 aa7.92□□□□□ -1.14
CHRNA3-208ENST00000561128 SPAG11BQ08648 103 aa7.92□□□□□ -1.14
CHRNA3-208ENST00000561128 PRSS47A8MTI9 375 aa7.91□□□□□ -1.14
CHRNA3-208ENST00000561128 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.91□□□□□ -1.14
CHRNA3-208ENST00000561128 ZNF561-AS1K7EIQ3 104 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms