RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 HNRNPA3P51991 378 aaKnown RBP11.96□□□□□ -0.49
HDDC3-206ENST00000561036 CEMP1Q6PRD7 247 aaPredicted RBP11.96□□□□□ -0.49
HDDC3-206ENST00000561036 MRPS16Q9Y3D3 137 aaKnown RBP11.96□□□□□ -0.49
HDDC3-206ENST00000561036 PRB2P02812 416 aaPredicted RBP11.95□□□□□ -0.5
HDDC3-206ENST00000561036 AMMECR1LQ6DCA0 310 aa11.95□□□□□ -0.5
HDDC3-206ENST00000561036 Q6ZUT4 128 aa11.95□□□□□ -0.5
HDDC3-206ENST00000561036 LURAP1LQ8IV03 231 aa11.95□□□□□ -0.5
HDDC3-206ENST00000561036 BOD1L2Q8IYS8 172 aa11.95□□□□□ -0.5
HDDC3-206ENST00000561036 OR5A1Q8NGJ0 315 aa11.95□□□□□ -0.5
HDDC3-206ENST00000561036 TMEM101Q96IK0 257 aa11.95□□□□□ -0.5
HDDC3-206ENST00000561036 PKD1L1Q8TDX9 2849 aa11.95□□□□□ -0.5
HDDC3-206ENST00000561036 DNAH3Q8TD57 4116 aa11.94□□□□□ -0.5
HDDC3-206ENST00000561036 H3BNG1 76 aa11.94□□□□□ -0.5
HDDC3-206ENST00000561036 HERVK_113P61574 105 aa11.94□□□□□ -0.5
HDDC3-206ENST00000561036 MRPL23Q16540 153 aaKnown RBP11.94□□□□□ -0.5
HDDC3-206ENST00000561036 DEFB121Q5J5C9 76 aa11.94□□□□□ -0.5
HDDC3-206ENST00000561036 A0A0J9YY99 117 aa11.93□□□□□ -0.5
HDDC3-206ENST00000561036 E9PLD3 99 aa11.93□□□□□ -0.5
HDDC3-206ENST00000561036 HTN3P15516 51 aa11.93□□□□□ -0.5
HDDC3-206ENST00000561036 NMUP48645 174 aa11.93□□□□□ -0.5
HDDC3-206ENST00000561036 CHAC1Q9BUX1 264 aa11.93□□□□□ -0.5
HDDC3-206ENST00000561036 A0A0J9YWU9 116 aa11.92□□□□□ -0.5
HDDC3-206ENST00000561036 TINCRA0A1B0GVN0 87 aa11.92□□□□□ -0.5
HDDC3-206ENST00000561036 SIVA1O15304 175 aa11.92□□□□□ -0.5
HDDC3-206ENST00000561036 CDC42SE2Q9NRR3 84 aa11.92□□□□□ -0.5
HDDC3-206ENST00000561036 ICOSQ9Y6W8 199 aa11.92□□□□□ -0.5
HDDC3-206ENST00000561036 NBEAL2Q6ZNJ1 2754 aa11.92□□□□□ -0.5
HDDC3-206ENST00000561036 IGKV2D-26A0A0A0MRZ7 120 aa11.91□□□□□ -0.5
HDDC3-206ENST00000561036 A0A0J9YXV3 536 aa11.91□□□□□ -0.5
HDDC3-206ENST00000561036 UBE2D1P51668 147 aa11.91□□□□□ -0.5
HDDC3-206ENST00000561036 FAM19A3Q7Z5A8 133 aa11.91□□□□□ -0.5
HDDC3-206ENST00000561036 CHCHD5Q9BSY4 110 aa11.91□□□□□ -0.5
HDDC3-206ENST00000561036 SEC11AP67812 179 aa11.9□□□□□ -0.5
HDDC3-206ENST00000561036 CTAG1AP78358 180 aa11.9□□□□□ -0.5
HDDC3-206ENST00000561036 TMEM170BQ5T4T1 132 aa11.9□□□□□ -0.5
HDDC3-206ENST00000561036 C11orf45Q8TAV5 145 aa11.9□□□□□ -0.5
HDDC3-206ENST00000561036 M0R143 59 aa11.89□□□□□ -0.51
HDDC3-206ENST00000561036 TIRAPP58753 221 aa11.89□□□□□ -0.51
HDDC3-206ENST00000561036 GAGE6Q13070 117 aa11.89□□□□□ -0.51
HDDC3-206ENST00000561036 RNASE13Q5GAN3 156 aaKnown RBP11.89□□□□□ -0.51
HDDC3-206ENST00000561036 PCP2Q8IVA1 136 aa11.89□□□□□ -0.51
HDDC3-206ENST00000561036 A0A1B0GUV1 79 aa11.88□□□□□ -0.51
HDDC3-206ENST00000561036 ZNF22P17026 224 aaPredicted RBP11.88□□□□□ -0.51
HDDC3-206ENST00000561036 TCTAP57738 103 aa11.88□□□□□ -0.51
HDDC3-206ENST00000561036 TMEM223A0PJW6 202 aa11.87□□□□□ -0.51
HDDC3-206ENST00000561036 KRTAP21-3Q3LHN1 58 aa11.87□□□□□ -0.51
HDDC3-206ENST00000561036 LBHQ53QV2 105 aaPredicted RBP11.87□□□□□ -0.51
HDDC3-206ENST00000561036 Q6ZTC4 211 aa11.87□□□□□ -0.51
HDDC3-206ENST00000561036 GEMIN7Q9H840 131 aaKnown RBP11.87□□□□□ -0.51
HDDC3-206ENST00000561036 IGLV5-45A0A087WSX0 123 aa11.86□□□□□ -0.51
HDDC3-206ENST00000561036 A0A096LPF7 62 aa11.86□□□□□ -0.51
HDDC3-206ENST00000561036 HERVK_113P63121 156 aa11.86□□□□□ -0.51
HDDC3-206ENST00000561036 C2orf91Q6ZV80 131 aa11.86□□□□□ -0.51
HDDC3-206ENST00000561036 MRAPQ8TCY5 172 aa11.86□□□□□ -0.51
HDDC3-206ENST00000561036 HIGD1BQ9P298 99 aa11.86□□□□□ -0.51
HDDC3-206ENST00000561036 TRAV8-6A0A0B4J262 113 aa11.85□□□□□ -0.51
HDDC3-206ENST00000561036 NANOS2P60321 138 aaKnown RBP11.85□□□□□ -0.51
HDDC3-206ENST00000561036 LELP1Q5T871 98 aa11.85□□□□□ -0.51
HDDC3-206ENST00000561036 H3BRM9 83 aa11.84□□□□□ -0.51
HDDC3-206ENST00000561036 LEPROTO15243 131 aa11.84□□□□□ -0.51
HDDC3-206ENST00000561036 PLEKHB2Q96CS7 222 aa11.84□□□□□ -0.51
HDDC3-206ENST00000561036 SNHG12Q9BXW3 62 aa11.84□□□□□ -0.51
HDDC3-206ENST00000561036 TP73-AS1Q9UF72 201 aa11.84□□□□□ -0.51
HDDC3-206ENST00000561036 DEFB131BA0A096LNP1 70 aa11.83□□□□□ -0.52
HDDC3-206ENST00000561036 MYMXA0A1B0GTQ4 84 aa11.83□□□□□ -0.52
HDDC3-206ENST00000561036 LINC00242Q5T6M2 205 aa11.83□□□□□ -0.52
HDDC3-206ENST00000561036 MAPKAPK5-AS1Q8N8E1 139 aa11.83□□□□□ -0.52
HDDC3-206ENST00000561036 IGLV4-60A0A075B6I1 120 aa11.82□□□□□ -0.52
HDDC3-206ENST00000561036 TMEM262E9PQX1 116 aa11.82□□□□□ -0.52
HDDC3-206ENST00000561036 RBX1P62877 108 aa11.82□□□□□ -0.52
HDDC3-206ENST00000561036 LINC00469Q8N7U9 141 aa11.82□□□□□ -0.52
HDDC3-206ENST00000561036 B9D2Q9BPU9 175 aa11.82□□□□□ -0.52
HDDC3-206ENST00000561036 TRAV10A0A0B4J240 114 aa11.81□□□□□ -0.52
HDDC3-206ENST00000561036 TRAV13-1A0A0B4J241 112 aa11.81□□□□□ -0.52
HDDC3-206ENST00000561036 J3QQQ9 107 aa11.81□□□□□ -0.52
HDDC3-206ENST00000561036 EREGO14944 169 aa11.81□□□□□ -0.52
HDDC3-206ENST00000561036 TTTY13Q9BZ97 58 aa11.81□□□□□ -0.52
HDDC3-206ENST00000561036 NOTCH1P46531 2555 aa11.8□□□□□ -0.52
HDDC3-206ENST00000561036 IGHV1-58A0A0C4DH39 117 aa11.8□□□□□ -0.52
HDDC3-206ENST00000561036 CCL25O15444 150 aa11.8□□□□□ -0.52
HDDC3-206ENST00000561036 LYPD5Q6UWN5 251 aa11.8□□□□□ -0.52
HDDC3-206ENST00000561036 ZNF815PA8K554 130 aa11.79□□□□□ -0.52
HDDC3-206ENST00000561036 LGALS3P17931 250 aaKnown RBP11.79□□□□□ -0.52
HDDC3-206ENST00000561036 HSD52Q0P140 79 aa11.79□□□□□ -0.52
HDDC3-206ENST00000561036 MPV17L2Q567V2 206 aa11.79□□□□□ -0.52
HDDC3-206ENST00000561036 CDKN2A-AS1Q9UH64 79 aa11.79□□□□□ -0.52
HDDC3-206ENST00000561036 MGAM2Q2M2H8 2515 aa11.79□□□□□ -0.52
HDDC3-206ENST00000561036 COX6A2Q02221 97 aa11.78□□□□□ -0.52
HDDC3-206ENST00000561036 IGHV3-30-3P0DP02 117 aa11.77□□□□□ -0.53
HDDC3-206ENST00000561036 HINT1P49773 126 aaPredicted RBP11.77□□□□□ -0.53
HDDC3-206ENST00000561036 NBEAL1Q6ZS30 2694 aa11.77□□□□□ -0.53
HDDC3-206ENST00000561036 TSPEAR-AS2P59090 65 aa11.76□□□□□ -0.53
HDDC3-206ENST00000561036 TAL2Q16559 108 aa11.76□□□□□ -0.53
HDDC3-206ENST00000561036 BVES-AS1Q5T3Y7 98 aa11.76□□□□□ -0.53
HDDC3-206ENST00000561036 C15orf53Q8NAA6 179 aa11.76□□□□□ -0.53
HDDC3-206ENST00000561036 IGLV5-39A0A0G2JS06 123 aa11.75□□□□□ -0.53
HDDC3-206ENST00000561036 LINC00959A0A1B0GUT2 108 aa11.75□□□□□ -0.53
HDDC3-206ENST00000561036 SPINK8P0C7L1 97 aa11.75□□□□□ -0.53
HDDC3-206ENST00000561036 NHLRC4P0CG21 123 aaPredicted RBP11.75□□□□□ -0.53
HDDC3-206ENST00000561036 SS18Q15532 418 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms