RNA–Protein interactions for RNA: ENST00000560920.6

TRIP4-211, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-211ENST00000560920 BIN3Q9NQY0 253 aa11.34□□□□□ -0.59
TRIP4-211ENST00000560920 CDC42SE2Q9NRR3 84 aa11.34□□□□□ -0.59
TRIP4-211ENST00000560920 BCL2L11O43521 198 aa11.33□□□□□ -0.6
TRIP4-211ENST00000560920 NUP35Q8NFH5 326 aa11.33□□□□□ -0.6
TRIP4-211ENST00000560920 MED9Q9NWA0 146 aa11.33□□□□□ -0.6
TRIP4-211ENST00000560920 LCE2BO14633 110 aa11.32□□□□□ -0.6
TRIP4-211ENST00000560920 TSHBP01222 138 aa11.32□□□□□ -0.6
TRIP4-211ENST00000560920 C1orf137Q5JT78 98 aa11.32□□□□□ -0.6
TRIP4-211ENST00000560920 TEX261Q6UWH6 196 aa11.32□□□□□ -0.6
TRIP4-211ENST00000560920 ISOC2Q96AB3 205 aa11.32□□□□□ -0.6
TRIP4-211ENST00000560920 TRBV6-5A0A0K0K1A5 114 aa11.31□□□□□ -0.6
TRIP4-211ENST00000560920 KANTRA0A1W2PQU2 76 aa11.31□□□□□ -0.6
TRIP4-211ENST00000560920 HMSDA8MTL9 139 aa11.31□□□□□ -0.6
TRIP4-211ENST00000560920 PDE6DO43924 150 aa11.31□□□□□ -0.6
TRIP4-211ENST00000560920 MEF2BQ02080 365 aaPredicted RBP11.31□□□□□ -0.6
TRIP4-211ENST00000560920 PHF5AQ7RTV0 110 aaKnown RBP11.31□□□□□ -0.6
TRIP4-211ENST00000560920 RNASE7Q9H1E1 156 aaKnown RBP11.31□□□□□ -0.6
TRIP4-211ENST00000560920 RPP21Q9H633 154 aaKnown RBP11.31□□□□□ -0.6
TRIP4-211ENST00000560920 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.3□□□□□ -0.6
TRIP4-211ENST00000560920 EIF5AP63241 154 aaKnown RBP11.3□□□□□ -0.6
TRIP4-211ENST00000560920 EIF5AL1Q6IS14 154 aaKnown RBP11.3□□□□□ -0.6
TRIP4-211ENST00000560920 MRPL52Q86TS9 123 aaKnown RBP11.3□□□□□ -0.6
TRIP4-211ENST00000560920 TMEM242Q9NWH2 141 aa11.3□□□□□ -0.6
TRIP4-211ENST00000560920 K7EN84 100 aa11.29□□□□□ -0.6
TRIP4-211ENST00000560920 APOMO95445 188 aa11.29□□□□□ -0.6
TRIP4-211ENST00000560920 SMIM15Q7Z3B0 74 aa11.29□□□□□ -0.6
TRIP4-211ENST00000560920 MRAP2Q96G30 205 aa11.29□□□□□ -0.6
TRIP4-211ENST00000560920 KRTAP9-2Q9BYQ4 174 aa11.29□□□□□ -0.6
TRIP4-211ENST00000560920 IGLV7-43P04211 117 aa11.28□□□□□ -0.6
TRIP4-211ENST00000560920 CAMK2N2Q96S95 79 aa11.28□□□□□ -0.6
TRIP4-211ENST00000560920 COX7A2LO14548 114 aa11.27□□□□□ -0.61
TRIP4-211ENST00000560920 MALP21145 153 aa11.27□□□□□ -0.61
TRIP4-211ENST00000560920 OCC1Q8TAD7 63 aa11.27□□□□□ -0.61
TRIP4-211ENST00000560920 DIRC1Q969H9 104 aa11.27□□□□□ -0.61
TRIP4-211ENST00000560920 POLR2KP53803 58 aaKnown RBP11.26□□□□□ -0.61
TRIP4-211ENST00000560920 KRTAP11-1Q8IUC1 163 aa11.26□□□□□ -0.61
TRIP4-211ENST00000560920 C2orf48Q96LS8 159 aa11.26□□□□□ -0.61
TRIP4-211ENST00000560920 OPRPNQ99935 248 aaPredicted RBP11.26□□□□□ -0.61
TRIP4-211ENST00000560920 ST20Q9HBF5 79 aa11.26□□□□□ -0.61
TRIP4-211ENST00000560920 C1orf196B1AJZ1 125 aa11.25□□□□□ -0.61
TRIP4-211ENST00000560920 TEX46H3BTG2 121 aa11.25□□□□□ -0.61
TRIP4-211ENST00000560920 RPL18AQ02543 176 aaKnown RBP11.25□□□□□ -0.61
TRIP4-211ENST00000560920 FAM210AQ96ND0 272 aa11.25□□□□□ -0.61
TRIP4-211ENST00000560920 H0Y9J4 135 aa11.24□□□□□ -0.61
TRIP4-211ENST00000560920 TRBV27A0A0K0K1C4 114 aa11.23□□□□□ -0.61
TRIP4-211ENST00000560920 C7orf77A4D0Y5 90 aa11.23□□□□□ -0.61
TRIP4-211ENST00000560920 KRTAP1-4P0C5Y4 121 aa11.22□□□□□ -0.61
TRIP4-211ENST00000560920 RNF151Q2KHN1 245 aa11.22□□□□□ -0.61
TRIP4-211ENST00000560920 C5orf38Q86SI9 138 aa11.22□□□□□ -0.61
TRIP4-211ENST00000560920 IGLV1-50A0A075B6I6 118 aa11.21□□□□□ -0.61
TRIP4-211ENST00000560920 A0A087WZ39 114 aa11.21□□□□□ -0.61
TRIP4-211ENST00000560920 RNASE13Q5GAN3 156 aaKnown RBP11.21□□□□□ -0.61
TRIP4-211ENST00000560920 TRAV13-1A0A0B4J241 112 aa11.2□□□□□ -0.62
TRIP4-211ENST00000560920 FAM168BA1KXE4 195 aa11.2□□□□□ -0.62
TRIP4-211ENST00000560920 PRR4Q16378 134 aa11.2□□□□□ -0.62
TRIP4-211ENST00000560920 RGS21Q2M5E4 152 aa11.2□□□□□ -0.62
TRIP4-211ENST00000560920 BATF3Q9NR55 127 aa11.2□□□□□ -0.62
TRIP4-211ENST00000560920 CSDC2Q9Y534 153 aaKnown RBP11.2□□□□□ -0.62
TRIP4-211ENST00000560920 GATCO43716 136 aaKnown RBP11.19□□□□□ -0.62
TRIP4-211ENST00000560920 SPAG11BQ08648 103 aa11.19□□□□□ -0.62
TRIP4-211ENST00000560920 UBE2D4Q9Y2X8 147 aa11.19□□□□□ -0.62
TRIP4-211ENST00000560920 A8MWL6 223 aa11.18□□□□□ -0.62
TRIP4-211ENST00000560920 RAB4AP20338 218 aa11.18□□□□□ -0.62
TRIP4-211ENST00000560920 FAM231DQ6ZW35 169 aa11.17□□□□□ -0.62
TRIP4-211ENST00000560920 TMEM191AQ9H0A3 160 aa11.17□□□□□ -0.62
TRIP4-211ENST00000560920 MRPL35Q9NZE8 188 aaKnown RBP11.17□□□□□ -0.62
TRIP4-211ENST00000560920 VCYO14598 125 aa11.16□□□□□ -0.62
TRIP4-211ENST00000560920 KRTAP7-1Q8IUC3 87 aa11.16□□□□□ -0.62
TRIP4-211ENST00000560920 TSKUQ8WUA8 353 aa11.16□□□□□ -0.62
TRIP4-211ENST00000560920 A0A0U1RQV1 116 aa11.15□□□□□ -0.62
TRIP4-211ENST00000560920 FCER1GP30273 86 aa11.15□□□□□ -0.62
TRIP4-211ENST00000560920 TAGLN2P37802 199 aaKnown RBP11.15□□□□□ -0.62
TRIP4-211ENST00000560920 C10orf25Q5T742 122 aa11.15□□□□□ -0.62
TRIP4-211ENST00000560920 Q6ZUT4 128 aa11.15□□□□□ -0.62
TRIP4-211ENST00000560920 AMN1Q8IY45 258 aa11.15□□□□□ -0.62
TRIP4-211ENST00000560920 OR10D4PQ8NGN7 298 aa11.15□□□□□ -0.62
TRIP4-211ENST00000560920 SMKR1H3BMG3 65 aa11.14□□□□□ -0.63
TRIP4-211ENST00000560920 IMMP2LQ96T52 175 aa11.14□□□□□ -0.63
TRIP4-211ENST00000560920 A0A1B0GUT8 65 aa11.13□□□□□ -0.63
TRIP4-211ENST00000560920 TLX1NBP0CAT3 122 aa11.13□□□□□ -0.63
TRIP4-211ENST00000560920 CT83Q5H943 113 aa11.13□□□□□ -0.63
TRIP4-211ENST00000560920 LCE2AQ5TA79 106 aaPredicted RBP11.13□□□□□ -0.63
TRIP4-211ENST00000560920 FAM19A5Q7Z5A7 132 aaPredicted RBP11.13□□□□□ -0.63
TRIP4-211ENST00000560920 BORCS7Q96B45 105 aa11.13□□□□□ -0.63
TRIP4-211ENST00000560920 F8WDY8 70 aa11.12□□□□□ -0.63
TRIP4-211ENST00000560920 UBE2D1P51668 147 aa11.12□□□□□ -0.63
TRIP4-211ENST00000560920 SMAGPQ0VAQ4 97 aa11.12□□□□□ -0.63
TRIP4-211ENST00000560920 NRACQ8N912 160 aa11.12□□□□□ -0.63
TRIP4-211ENST00000560920 ORAOV1Q8WV07 137 aa11.12□□□□□ -0.63
TRIP4-211ENST00000560920 TIMM21Q9BVV7 248 aa11.12□□□□□ -0.63
TRIP4-211ENST00000560920 HIGD1CA8MV81 97 aa11.11□□□□□ -0.63
TRIP4-211ENST00000560920 UNQ6190/PRO20217Q6UXQ8 127 aa11.11□□□□□ -0.63
TRIP4-211ENST00000560920 FAM104AQ969W3 186 aa11.11□□□□□ -0.63
TRIP4-211ENST00000560920 C6orf48Q9UBA6 75 aa11.11□□□□□ -0.63
TRIP4-211ENST00000560920 FAT4Q6V0I7 4981 aa11.11□□□□□ -0.63
TRIP4-211ENST00000560920 IGHV3OR16-9A0A0B4J2B5 98 aa11.1□□□□□ -0.63
TRIP4-211ENST00000560920 NDUFA1O15239 70 aa11.1□□□□□ -0.63
TRIP4-211ENST00000560920 RPL13AP40429 203 aaKnown RBP11.1□□□□□ -0.63
TRIP4-211ENST00000560920 SUMO2P61956 95 aaKnown RBP11.1□□□□□ -0.63
TRIP4-211ENST00000560920 GAGE2EQ4V326 116 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms