RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 TMA7Q9Y2S6 64 aaKnown RBP3.74□□□□□ -1.81
ZEB1-220ENST00000560909 MRPS16Q9Y3D3 137 aaKnown RBP3.74□□□□□ -1.81
ZEB1-220ENST00000560909 DNAH2Q9P225 4427 aa3.73□□□□□ -1.81
ZEB1-220ENST00000560909 LYSTQ99698 3801 aa3.73□□□□□ -1.81
ZEB1-220ENST00000560909 KMT2AQ03164 3969 aa3.73□□□□□ -1.81
ZEB1-220ENST00000560909 A0A096LNJ9 63 aa3.73□□□□□ -1.81
ZEB1-220ENST00000560909 IGHV3-38A0A0C4DH36 116 aa3.73□□□□□ -1.81
ZEB1-220ENST00000560909 A0A1B0GUV1 79 aa3.73□□□□□ -1.81
ZEB1-220ENST00000560909 LINC01549A6NIU2 74 aa3.73□□□□□ -1.81
ZEB1-220ENST00000560909 NPSP0C0P6 89 aa3.73□□□□□ -1.81
ZEB1-220ENST00000560909 ORMDL2Q53FV1 153 aa3.73□□□□□ -1.81
ZEB1-220ENST00000560909 MRPL52Q86TS9 123 aaKnown RBP3.73□□□□□ -1.81
ZEB1-220ENST00000560909 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.73□□□□□ -1.81
ZEB1-220ENST00000560909 FAM104AQ969W3 186 aa3.73□□□□□ -1.81
ZEB1-220ENST00000560909 PACRGQ96M98 296 aaPredicted RBP3.73□□□□□ -1.81
ZEB1-220ENST00000560909 KIR2DL4Q99706 377 aa3.73□□□□□ -1.81
ZEB1-220ENST00000560909 PYGO1Q9Y3Y4 419 aa3.73□□□□□ -1.81
ZEB1-220ENST00000560909 LINC00588Q9Y4M8 146 aa3.73□□□□□ -1.81
ZEB1-220ENST00000560909 CSDC2Q9Y534 153 aaKnown RBP3.73□□□□□ -1.81
ZEB1-220ENST00000560909 HYDINQ4G0P3 5121 aa3.72□□□□□ -1.81
ZEB1-220ENST00000560909 TRBV25-1A0A075B6N4 114 aa3.72□□□□□ -1.81
ZEB1-220ENST00000560909 IGHV1-24A0A0C4DH33 117 aa3.72□□□□□ -1.81
ZEB1-220ENST00000560909 LOC389332A0A1B0GUA5 103 aa3.72□□□□□ -1.81
ZEB1-220ENST00000560909 IGIPA6NJ69 53 aa3.72□□□□□ -1.81
ZEB1-220ENST00000560909 K7EP13 123 aa3.72□□□□□ -1.81
ZEB1-220ENST00000560909 NUPR1O60356 82 aa3.72□□□□□ -1.81
ZEB1-220ENST00000560909 SERF1AO75920 110 aa3.72□□□□□ -1.81
ZEB1-220ENST00000560909 NUDT3O95989 172 aa3.72□□□□□ -1.81
ZEB1-220ENST00000560909 DNAH10OSP0CZ25 163 aa3.72□□□□□ -1.81
ZEB1-220ENST00000560909 G0S2P27469 103 aa3.72□□□□□ -1.81
ZEB1-220ENST00000560909 FCER1GP30273 86 aa3.72□□□□□ -1.81
ZEB1-220ENST00000560909 CCL18P55774 89 aa3.72□□□□□ -1.81
ZEB1-220ENST00000560909 LAGE3Q14657 143 aa3.72□□□□□ -1.81
ZEB1-220ENST00000560909 PDZD11Q5EBL8 140 aa3.72□□□□□ -1.81
ZEB1-220ENST00000560909 LINC01556Q5JQF7 62 aa3.72□□□□□ -1.81
ZEB1-220ENST00000560909 LGALS9CQ6DKI2 356 aa3.72□□□□□ -1.81
ZEB1-220ENST00000560909 ZFAND6Q6FIF0 208 aa3.72□□□□□ -1.81
ZEB1-220ENST00000560909 FA2HQ7L5A8 372 aa3.72□□□□□ -1.81
ZEB1-220ENST00000560909 PRSS3P2Q8NHM4 247 aa3.72□□□□□ -1.81
ZEB1-220ENST00000560909 TMEM243Q9BU79 118 aa3.72□□□□□ -1.81
ZEB1-220ENST00000560909 DNAH17Q9UFH2 4485 aa3.71□□□□□ -1.82
ZEB1-220ENST00000560909 AMTP48728 403 aa3.71□□□□□ -1.82
ZEB1-220ENST00000560909 PKIAP61925 76 aa3.71□□□□□ -1.82
ZEB1-220ENST00000560909 MRPS36P82909 103 aaKnown RBP3.71□□□□□ -1.82
ZEB1-220ENST00000560909 BAGE3Q86Y29 109 aa3.71□□□□□ -1.82
ZEB1-220ENST00000560909 TOMM6Q96B49 74 aa3.71□□□□□ -1.82
ZEB1-220ENST00000560909 SPANXA1Q9NS26 97 aa3.71□□□□□ -1.82
ZEB1-220ENST00000560909 RYR2Q92736 4967 aa3.71□□□□□ -1.82
ZEB1-220ENST00000560909 DNAH10Q8IVF4 4471 aa3.7□□□□□ -1.82
ZEB1-220ENST00000560909 TRAV8-6A0A0B4J262 113 aa3.7□□□□□ -1.82
ZEB1-220ENST00000560909 C5orf52A6NGY3 159 aa3.7□□□□□ -1.82
ZEB1-220ENST00000560909 HBDP02042 147 aa3.7□□□□□ -1.82
ZEB1-220ENST00000560909 FGF6P10767 208 aa3.7□□□□□ -1.82
ZEB1-220ENST00000560909 ZNF25P17030 456 aaPredicted RBP3.7□□□□□ -1.82
ZEB1-220ENST00000560909 BTF3P20290 206 aaKnown RBP3.7□□□□□ -1.82
ZEB1-220ENST00000560909 RBX1P62877 108 aa3.7□□□□□ -1.82
ZEB1-220ENST00000560909 RPL39P62891 51 aaKnown RBP3.7□□□□□ -1.82
ZEB1-220ENST00000560909 C2orf66Q6UXQ4 117 aa3.7□□□□□ -1.82
ZEB1-220ENST00000560909 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
ZEB1-220ENST00000560909 ERASQ7Z444 233 aa3.7□□□□□ -1.82
ZEB1-220ENST00000560909 TMEM18Q96B42 140 aa3.7□□□□□ -1.82
ZEB1-220ENST00000560909 TIMM17AQ99595 171 aa3.7□□□□□ -1.82
ZEB1-220ENST00000560909 CDC42SE2Q9NRR3 84 aa3.7□□□□□ -1.82
ZEB1-220ENST00000560909 PRR34Q9NV39 138 aa3.7□□□□□ -1.82
ZEB1-220ENST00000560909 CYSLTR1Q9Y271 337 aa3.7□□□□□ -1.82
ZEB1-220ENST00000560909 UBE2D4Q9Y2X8 147 aa3.7□□□□□ -1.82
ZEB1-220ENST00000560909 EPPK1P58107 5090 aaKnown RBP3.69□□□□□ -1.82
ZEB1-220ENST00000560909 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.69□□□□□ -1.82
ZEB1-220ENST00000560909 IGKV2-29A2NJV5 120 aaPredicted RBP3.69□□□□□ -1.82
ZEB1-220ENST00000560909 IFITM10A6NMD0 228 aa3.69□□□□□ -1.82
ZEB1-220ENST00000560909 HSBP1O75506 76 aa3.69□□□□□ -1.82
ZEB1-220ENST00000560909 NDUFA6P56556 154 aa3.69□□□□□ -1.82
ZEB1-220ENST00000560909 SMAGPQ0VAQ4 97 aa3.69□□□□□ -1.82
ZEB1-220ENST00000560909 RNASEKQ6P5S7 137 aaKnown RBP3.69□□□□□ -1.82
ZEB1-220ENST00000560909 WFDC10BQ8IUB3 73 aa3.69□□□□□ -1.82
ZEB1-220ENST00000560909 HIST3H2BBQ8N257 126 aa3.69□□□□□ -1.82
ZEB1-220ENST00000560909 LINC00476Q8WZB0 136 aa3.69□□□□□ -1.82
ZEB1-220ENST00000560909 TMEM141Q96I45 108 aa3.69□□□□□ -1.82
ZEB1-220ENST00000560909 AMELXQ99217 191 aa3.69□□□□□ -1.82
ZEB1-220ENST00000560909 CHCHD5Q9BSY4 110 aa3.69□□□□□ -1.82
ZEB1-220ENST00000560909 Q9H8V8 135 aa3.69□□□□□ -1.82
ZEB1-220ENST00000560909 IGLV4-60A0A075B6I1 120 aa3.68□□□□□ -1.82
ZEB1-220ENST00000560909 IGLV4-3A0A075B6K6 122 aa3.68□□□□□ -1.82
ZEB1-220ENST00000560909 IBA57-AS1B1ANH7 110 aa3.68□□□□□ -1.82
ZEB1-220ENST00000560909 SIVA1O15304 175 aa3.68□□□□□ -1.82
ZEB1-220ENST00000560909 ATP5LO75964 103 aa3.68□□□□□ -1.82
ZEB1-220ENST00000560909 GAGE6Q13070 117 aa3.68□□□□□ -1.82
ZEB1-220ENST00000560909 MPV17L2Q567V2 206 aa3.68□□□□□ -1.82
ZEB1-220ENST00000560909 Q6ZR54 194 aa3.68□□□□□ -1.82
ZEB1-220ENST00000560909 LINC00173Q6ZV60 143 aa3.68□□□□□ -1.82
ZEB1-220ENST00000560909 FAM19A3Q7Z5A8 133 aa3.68□□□□□ -1.82
ZEB1-220ENST00000560909 SPATA12Q7Z6I5 190 aa3.68□□□□□ -1.82
ZEB1-220ENST00000560909 FAM19A2Q8N3H0 131 aa3.68□□□□□ -1.82
ZEB1-220ENST00000560909 DEFB104AQ8WTQ1 72 aa3.68□□□□□ -1.82
ZEB1-220ENST00000560909 DNAH11Q96DT5 4516 aa3.67□□□□□ -1.82
ZEB1-220ENST00000560909 FAT2Q9NYQ8 4349 aa3.67□□□□□ -1.82
ZEB1-220ENST00000560909 A0A087WX48 190 aa3.67□□□□□ -1.82
ZEB1-220ENST00000560909 TRAV12-1A0A0B4J245 112 aa3.67□□□□□ -1.82
ZEB1-220ENST00000560909 UBE2L6O14933 153 aa3.67□□□□□ -1.82
ZEB1-220ENST00000560909 CCL25O15444 150 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms