RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 TSKUQ8WUA8 353 aa7.08□□□□□ -1.28
GABPB1-210ENST00000560825 ISOC2Q96AB3 205 aa7.08□□□□□ -1.28
GABPB1-210ENST00000560825 A0A087WYN8 130 aa7.07□□□□□ -1.28
GABPB1-210ENST00000560825 TRBV6-5A0A0K0K1A5 114 aa7.07□□□□□ -1.28
GABPB1-210ENST00000560825 APCSP02743 223 aa7.07□□□□□ -1.28
GABPB1-210ENST00000560825 POLR2KP53803 58 aaKnown RBP7.07□□□□□ -1.28
GABPB1-210ENST00000560825 RPL23P62829 140 aaKnown RBP7.07□□□□□ -1.28
GABPB1-210ENST00000560825 NRACQ8N912 160 aa7.07□□□□□ -1.28
GABPB1-210ENST00000560825 CLRN3Q8NCR9 226 aa7.07□□□□□ -1.28
GABPB1-210ENST00000560825 SPACA4Q8TDM5 124 aa7.07□□□□□ -1.28
GABPB1-210ENST00000560825 OSTCQ9NRP0 149 aa7.07□□□□□ -1.28
GABPB1-210ENST00000560825 A0A1B0GUT8 65 aa7.06□□□□□ -1.28
GABPB1-210ENST00000560825 I3L3M4 83 aa7.06□□□□□ -1.28
GABPB1-210ENST00000560825 MT1HL1P0DM35 61 aa7.06□□□□□ -1.28
GABPB1-210ENST00000560825 COX6A2Q02221 97 aa7.06□□□□□ -1.28
GABPB1-210ENST00000560825 ODF1Q14990 250 aa7.06□□□□□ -1.28
GABPB1-210ENST00000560825 RNASE13Q5GAN3 156 aaKnown RBP7.06□□□□□ -1.28
GABPB1-210ENST00000560825 TMEM191AQ9H0A3 160 aa7.06□□□□□ -1.28
GABPB1-210ENST00000560825 LINC00959A0A1B0GUT2 108 aa7.05□□□□□ -1.28
GABPB1-210ENST00000560825 PMCHP20382 165 aa7.05□□□□□ -1.28
GABPB1-210ENST00000560825 XCL1P47992 114 aa7.05□□□□□ -1.28
GABPB1-210ENST00000560825 AMMECR1LQ6DCA0 310 aa7.05□□□□□ -1.28
GABPB1-210ENST00000560825 FAM104AQ969W3 186 aa7.05□□□□□ -1.28
GABPB1-210ENST00000560825 ST20Q9HBF5 79 aa7.05□□□□□ -1.28
GABPB1-210ENST00000560825 IGHV3-64A0A075B6Q5 118 aa7.04□□□□□ -1.28
GABPB1-210ENST00000560825 A0A096LNI7 61 aa7.04□□□□□ -1.28
GABPB1-210ENST00000560825 CCL25O15444 150 aa7.04□□□□□ -1.28
GABPB1-210ENST00000560825 GVQW2A0A096LPI5 108 aaPredicted RBP7.03□□□□□ -1.28
GABPB1-210ENST00000560825 IGKV2-24A0A0C4DH68 120 aa7.03□□□□□ -1.28
GABPB1-210ENST00000560825 TRBV27A0A0K0K1C4 114 aa7.03□□□□□ -1.28
GABPB1-210ENST00000560825 ADIRFQ15847 76 aa7.03□□□□□ -1.28
GABPB1-210ENST00000560825 MRPL51Q4U2R6 128 aaKnown RBP7.03□□□□□ -1.28
GABPB1-210ENST00000560825 SMIM15Q7Z3B0 74 aa7.03□□□□□ -1.28
GABPB1-210ENST00000560825 OR5A1Q8NGJ0 315 aa7.03□□□□□ -1.28
GABPB1-210ENST00000560825 CDC42SE2Q9NRR3 84 aa7.03□□□□□ -1.28
GABPB1-210ENST00000560825 PHOX2AO14813 284 aa7.02□□□□□ -1.29
GABPB1-210ENST00000560825 TMEM241Q24JQ0 296 aa7.02□□□□□ -1.29
GABPB1-210ENST00000560825 TEX261Q6UWH6 196 aa7.02□□□□□ -1.29
GABPB1-210ENST00000560825 PLAC8Q9NZF1 115 aa7.02□□□□□ -1.29
GABPB1-210ENST00000560825 SMIM27A0A1W2PRY6 76 aa7.01□□□□□ -1.29
GABPB1-210ENST00000560825 H7C423 109 aa7.01□□□□□ -1.29
GABPB1-210ENST00000560825 NDUFS6O75380 124 aaKnown RBP7.01□□□□□ -1.29
GABPB1-210ENST00000560825 MRPL52Q86TS9 123 aaKnown RBP7.01□□□□□ -1.29
GABPB1-210ENST00000560825 MRAP2Q96G30 205 aa7.01□□□□□ -1.29
GABPB1-210ENST00000560825 AP5S1Q9NUS5 200 aa7.01□□□□□ -1.29
GABPB1-210ENST00000560825 OXTP01178 125 aa7.01□□□□□ -1.29
GABPB1-210ENST00000560825 ZNF25P17030 456 aaPredicted RBP7.01□□□□□ -1.29
GABPB1-210ENST00000560825 CAMPP49913 170 aa7.01□□□□□ -1.29
GABPB1-210ENST00000560825 MAJINQ3KP22 176 aa7.01□□□□□ -1.29
GABPB1-210ENST00000560825 FAM74A3Q4VXF1 159 aa7.01□□□□□ -1.29
GABPB1-210ENST00000560825 ZNF664Q8N3J9 261 aa7.01□□□□□ -1.29
GABPB1-210ENST00000560825 BORCS7Q96B45 105 aa7.01□□□□□ -1.29
GABPB1-210ENST00000560825 OPRPNQ99935 248 aaPredicted RBP7.01□□□□□ -1.29
GABPB1-210ENST00000560825 UBE2D4Q9Y2X8 147 aa7.01□□□□□ -1.29
GABPB1-210ENST00000560825 TRAV16A0A0A6YYK6 109 aaPredicted RBP7□□□□□ -1.29
GABPB1-210ENST00000560825 SUMO2P61956 95 aaKnown RBP7□□□□□ -1.29
GABPB1-210ENST00000560825 RPL39P62891 51 aaKnown RBP7□□□□□ -1.29
GABPB1-210ENST00000560825 FAM104BQ5XKR9 115 aa7□□□□□ -1.29
GABPB1-210ENST00000560825 Q6ZUT4 128 aa7□□□□□ -1.29
GABPB1-210ENST00000560825 DPH3Q96FX2 82 aa7□□□□□ -1.29
GABPB1-210ENST00000560825 C7orf77A4D0Y5 90 aa6.99□□□□□ -1.29
GABPB1-210ENST00000560825 RIGQ13278 110 aa6.99□□□□□ -1.29
GABPB1-210ENST00000560825 MRPL54Q6P161 138 aaKnown RBP6.99□□□□□ -1.29
GABPB1-210ENST00000560825 STPG4Q8N801 248 aa6.99□□□□□ -1.29
GABPB1-210ENST00000560825 TMEM101Q96IK0 257 aa6.99□□□□□ -1.29
GABPB1-210ENST00000560825 NAT8Q9UHE5 227 aa6.99□□□□□ -1.29
GABPB1-210ENST00000560825 NAT8BQ9UHF3 227 aa6.99□□□□□ -1.29
GABPB1-210ENST00000560825 A0A1B0GXF2 115 aa6.98□□□□□ -1.29
GABPB1-210ENST00000560825 NPYP01303 97 aa6.98□□□□□ -1.29
GABPB1-210ENST00000560825 CFAP161Q6P656 301 aa6.98□□□□□ -1.29
GABPB1-210ENST00000560825 IGLV4-69A0A075B6H9 119 aa6.97□□□□□ -1.29
GABPB1-210ENST00000560825 VCYO14598 125 aa6.97□□□□□ -1.29
GABPB1-210ENST00000560825 CD164L2Q6UWJ8 174 aa6.97□□□□□ -1.29
GABPB1-210ENST00000560825 Q6ZRU5 148 aa6.97□□□□□ -1.29
GABPB1-210ENST00000560825 BTF3L4Q96K17 158 aa6.97□□□□□ -1.29
GABPB1-210ENST00000560825 TMA7Q9Y2S6 64 aaKnown RBP6.97□□□□□ -1.29
GABPB1-210ENST00000560825 TRAV13-1A0A0B4J241 112 aa6.96□□□□□ -1.3
GABPB1-210ENST00000560825 IGHV1-58A0A0C4DH39 117 aa6.96□□□□□ -1.3
GABPB1-210ENST00000560825 A0A0J9YXV3 536 aa6.96□□□□□ -1.3
GABPB1-210ENST00000560825 D6R8Y8 96 aa6.96□□□□□ -1.3
GABPB1-210ENST00000560825 TNFRSF6BO95407 300 aa6.96□□□□□ -1.3
GABPB1-210ENST00000560825 FCER1GP30273 86 aa6.96□□□□□ -1.3
GABPB1-210ENST00000560825 PRR3P79522 188 aaKnown RBP6.96□□□□□ -1.3
GABPB1-210ENST00000560825 C5orf38Q86SI9 138 aa6.96□□□□□ -1.3
GABPB1-210ENST00000560825 LRP2P98164 4655 aa6.96□□□□□ -1.3
GABPB1-210ENST00000560825 TRBV24-1A0A075B6N3 115 aa6.95□□□□□ -1.3
GABPB1-210ENST00000560825 A0A1W2PNN7 141 aa6.95□□□□□ -1.3
GABPB1-210ENST00000560825 TCAPO15273 167 aa6.95□□□□□ -1.3
GABPB1-210ENST00000560825 GHRHP01286 108 aa6.95□□□□□ -1.3
GABPB1-210ENST00000560825 SS18Q15532 418 aa6.95□□□□□ -1.3
GABPB1-210ENST00000560825 CARD19Q96LW7 228 aa6.95□□□□□ -1.3
GABPB1-210ENST00000560825 CKS2P33552 79 aa6.94□□□□□ -1.3
GABPB1-210ENST00000560825 SYCNQ0VAF6 134 aa6.94□□□□□ -1.3
GABPB1-210ENST00000560825 PEA15Q15121 130 aa6.94□□□□□ -1.3
GABPB1-210ENST00000560825 SMIM2Q9BVW6 85 aa6.93□□□□□ -1.3
GABPB1-210ENST00000560825 KRTAP4-9Q9BYQ8 210 aa6.93□□□□□ -1.3
GABPB1-210ENST00000560825 CSDC2Q9Y534 153 aaKnown RBP6.93□□□□□ -1.3
GABPB1-210ENST00000560825 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.93□□□□□ -1.3
GABPB1-210ENST00000560825 COX7A2LO14548 114 aa6.93□□□□□ -1.3
GABPB1-210ENST00000560825 PTTG1IPP53801 180 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms