RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, human

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF9-208	ENST00000560311	FAT3	Q8TDW7	4589 aa		4.27	□□□□□ -1.73
IRF9-208	ENST00000560311	HIGD1C	A8MV81	97 aa		4.26	□□□□□ -1.73
IRF9-208	ENST00000560311	EPM2A	B3EWF7	344 aa		4.26	□□□□□ -1.73
IRF9-208	ENST00000560311	UBE2L6	O14933	153 aa		4.26	□□□□□ -1.73
IRF9-208	ENST00000560311	ADIRF	Q15847	76 aa		4.26	□□□□□ -1.73
IRF9-208	ENST00000560311	TEX261	Q6UWH6	196 aa		4.26	□□□□□ -1.73
IRF9-208	ENST00000560311	LINC00269	Q8N2A0	174 aa		4.26	□□□□□ -1.73
IRF9-208	ENST00000560311	FRZB	Q92765	325 aa		4.26	□□□□□ -1.73
IRF9-208	ENST00000560311	ISOC2	Q96AB3	205 aa		4.26	□□□□□ -1.73
IRF9-208	ENST00000560311	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.26	□□□□□ -1.73
IRF9-208	ENST00000560311	GFRA4	Q9GZZ7	299 aa		4.26	□□□□□ -1.73
IRF9-208	ENST00000560311	OSTC	Q9NRP0	149 aa		4.26	□□□□□ -1.73
IRF9-208	ENST00000560311	PRR34	Q9NV39	138 aa		4.26	□□□□□ -1.73
IRF9-208	ENST00000560311		V9GYV3	84 aa		4.26	□□□□□ -1.73
IRF9-208	ENST00000560311	IGLV4-60	A0A075B6I1	120 aa		4.25	□□□□□ -1.73
IRF9-208	ENST00000560311	IGLV10-54	A0A075B6I4	117 aa		4.25	□□□□□ -1.73
IRF9-208	ENST00000560311		A0A1B0GUT8	65 aa		4.25	□□□□□ -1.73
IRF9-208	ENST00000560311		C9JQL5	133 aa		4.25	□□□□□ -1.73
IRF9-208	ENST00000560311	USP17L23	D6RBM5	183 aa		4.25	□□□□□ -1.73
IRF9-208	ENST00000560311	APCS	P02743	223 aa		4.25	□□□□□ -1.73
IRF9-208	ENST00000560311	RPL23	P62829	140 aa	Known RBP	4.25	□□□□□ -1.73
IRF9-208	ENST00000560311	REG3A	Q06141	175 aa		4.25	□□□□□ -1.73
IRF9-208	ENST00000560311	LINC01620	Q4KN68	170 aa		4.25	□□□□□ -1.73
IRF9-208	ENST00000560311	FAM74A3	Q4VXF1	159 aa		4.25	□□□□□ -1.73
IRF9-208	ENST00000560311	C14orf177	Q52M58	125 aa		4.25	□□□□□ -1.73
IRF9-208	ENST00000560311		Q6ZSA8	131 aa		4.25	□□□□□ -1.73
IRF9-208	ENST00000560311	C20orf203	Q8NBC4	194 aa		4.25	□□□□□ -1.73
IRF9-208	ENST00000560311	FAM30A	Q9NZY2	134 aa		4.25	□□□□□ -1.73
IRF9-208	ENST00000560311	NAT8	Q9UHE5	227 aa		4.25	□□□□□ -1.73
IRF9-208	ENST00000560311	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.24	□□□□□ -1.73
IRF9-208	ENST00000560311	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.24	□□□□□ -1.73
IRF9-208	ENST00000560311	FAM231B	A6NCW3	169 aa		4.24	□□□□□ -1.73
IRF9-208	ENST00000560311	SDHAF1	A6NFY7	115 aa		4.24	□□□□□ -1.73
IRF9-208	ENST00000560311	TMEM238	C9JI98	176 aa		4.24	□□□□□ -1.73
IRF9-208	ENST00000560311	GAS8-AS1	O95177	125 aa		4.24	□□□□□ -1.73
IRF9-208	ENST00000560311	NCR2	O95944	276 aa		4.24	□□□□□ -1.73
IRF9-208	ENST00000560311	SMR3B	P02814	79 aa	Predicted RBP	4.24	□□□□□ -1.73
IRF9-208	ENST00000560311	PEA15	Q15121	130 aa		4.24	□□□□□ -1.73
IRF9-208	ENST00000560311	TMEM241	Q24JQ0	296 aa		4.24	□□□□□ -1.73
IRF9-208	ENST00000560311	KRTAP26-1	Q6PEX3	210 aa		4.24	□□□□□ -1.73
IRF9-208	ENST00000560311	AMN1	Q8IY45	258 aa		4.24	□□□□□ -1.73
IRF9-208	ENST00000560311	NUP35	Q8NFH5	326 aa		4.24	□□□□□ -1.73
IRF9-208	ENST00000560311	RNF185	Q96GF1	192 aa		4.24	□□□□□ -1.73
IRF9-208	ENST00000560311	TMEM191A	Q9H0A3	160 aa		4.24	□□□□□ -1.73
IRF9-208	ENST00000560311	TMEM242	Q9NWH2	141 aa		4.24	□□□□□ -1.73
IRF9-208	ENST00000560311	TRBV6-5	A0A0K0K1A5	114 aa		4.23	□□□□□ -1.73
IRF9-208	ENST00000560311		A0A1B0GUV1	79 aa		4.23	□□□□□ -1.73
IRF9-208	ENST00000560311	GAGE10	A6NGK3	116 aa		4.23	□□□□□ -1.73
IRF9-208	ENST00000560311	LINC00587	B1AMM8	73 aa		4.23	□□□□□ -1.73
IRF9-208	ENST00000560311	TSHB	P01222	138 aa		4.23	□□□□□ -1.73
IRF9-208	ENST00000560311	RPS10	P46783	165 aa	Known RBP	4.23	□□□□□ -1.73
IRF9-208	ENST00000560311	AMMECR1L	Q6DCA0	310 aa		4.23	□□□□□ -1.73
IRF9-208	ENST00000560311	SCX	Q7RTU7	201 aa		4.23	□□□□□ -1.73
IRF9-208	ENST00000560311	MRAP2	Q96G30	205 aa		4.23	□□□□□ -1.73
IRF9-208	ENST00000560311	GEMIN7	Q9H840	131 aa	Known RBP	4.23	□□□□□ -1.73
IRF9-208	ENST00000560311	ST20	Q9HBF5	79 aa		4.23	□□□□□ -1.73
IRF9-208	ENST00000560311	NAT8B	Q9UHF3	227 aa		4.23	□□□□□ -1.73
IRF9-208	ENST00000560311	TRAV8-4	A0A0B4J246	113 aa		4.22	□□□□□ -1.73
IRF9-208	ENST00000560311	IGKV3OR2-268	A0A0C4DH90	116 aa		4.22	□□□□□ -1.73
IRF9-208	ENST00000560311	C5orf52	A6NGY3	159 aa		4.22	□□□□□ -1.73
IRF9-208	ENST00000560311	SMKR1	H3BMG3	65 aa		4.22	□□□□□ -1.73
IRF9-208	ENST00000560311		I3L3M4	83 aa		4.22	□□□□□ -1.73
IRF9-208	ENST00000560311	PRSS1	P07477	247 aa		4.22	□□□□□ -1.73
IRF9-208	ENST00000560311	FGF6	P10767	208 aa		4.22	□□□□□ -1.73
IRF9-208	ENST00000560311	PTTG1IP	P53801	180 aa		4.22	□□□□□ -1.73
IRF9-208	ENST00000560311	RIG	Q13278	110 aa		4.22	□□□□□ -1.73
IRF9-208	ENST00000560311	LCE1A	Q5T7P2	110 aa		4.22	□□□□□ -1.73
IRF9-208	ENST00000560311	RNASEK	Q6P5S7	137 aa	Known RBP	4.22	□□□□□ -1.73
IRF9-208	ENST00000560311	PACRG	Q96M98	296 aa	Predicted RBP	4.22	□□□□□ -1.73
IRF9-208	ENST00000560311	SMDT1	Q9H4I9	107 aa		4.22	□□□□□ -1.73
IRF9-208	ENST00000560311	SMIM27	A0A1W2PRY6	76 aa		4.21	□□□□□ -1.74
IRF9-208	ENST00000560311		F8W036	122 aa		4.21	□□□□□ -1.74
IRF9-208	ENST00000560311		H7C423	109 aa		4.21	□□□□□ -1.74
IRF9-208	ENST00000560311	INAFM2	P0DMQ5	153 aa		4.21	□□□□□ -1.74
IRF9-208	ENST00000560311	ZNF25	P17030	456 aa	Predicted RBP	4.21	□□□□□ -1.74
IRF9-208	ENST00000560311	PMCH	P20382	165 aa		4.21	□□□□□ -1.74
IRF9-208	ENST00000560311	MRPL54	Q6P161	138 aa	Known RBP	4.21	□□□□□ -1.74
IRF9-208	ENST00000560311	NRAC	Q8N912	160 aa		4.21	□□□□□ -1.74
IRF9-208	ENST00000560311	HMCN2	Q8NDA2	5059 aa		4.2	□□□□□ -1.74
IRF9-208	ENST00000560311	TRBV27	A0A0K0K1C4	114 aa		4.2	□□□□□ -1.74
IRF9-208	ENST00000560311		A0A1B0GW15	77 aa		4.2	□□□□□ -1.74
IRF9-208	ENST00000560311	hDV102S1	A0JD36	115 aa		4.2	□□□□□ -1.74
IRF9-208	ENST00000560311	C7orf77	A4D0Y5	90 aa		4.2	□□□□□ -1.74
IRF9-208	ENST00000560311	ESD	P10768	282 aa		4.2	□□□□□ -1.74
IRF9-208	ENST00000560311	CAMP	P49913	170 aa		4.2	□□□□□ -1.74
IRF9-208	ENST00000560311	KRTAP10-6	P60371	365 aa	Predicted RBP	4.2	□□□□□ -1.74
IRF9-208	ENST00000560311	SUMO2	P61956	95 aa	Known RBP	4.2	□□□□□ -1.74
IRF9-208	ENST00000560311	CNBP	P62633	177 aa	Known RBP	4.2	□□□□□ -1.74
IRF9-208	ENST00000560311	HBB	P68871	147 aa		4.2	□□□□□ -1.74
IRF9-208	ENST00000560311	MRPL51	Q4U2R6	128 aa	Known RBP	4.2	□□□□□ -1.74
IRF9-208	ENST00000560311	DGAT2L7P	Q6IED9	249 aa		4.2	□□□□□ -1.74
IRF9-208	ENST00000560311	C15orf56	Q8N910	161 aa		4.2	□□□□□ -1.74
IRF9-208	ENST00000560311	OR5A1	Q8NGJ0	315 aa		4.2	□□□□□ -1.74
IRF9-208	ENST00000560311	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.2	□□□□□ -1.74
IRF9-208	ENST00000560311	TMEM101	Q96IK0	257 aa		4.2	□□□□□ -1.74
IRF9-208	ENST00000560311	CHAC1	Q9BUX1	264 aa		4.2	□□□□□ -1.74
IRF9-208	ENST00000560311	LRP1	Q07954	4544 aa	Known RBP	4.19	□□□□□ -1.74
IRF9-208	ENST00000560311		A0A1B0GXF2	115 aa		4.19	□□□□□ -1.74
IRF9-208	ENST00000560311	PPP1R2P9	O14990	202 aa		4.19	□□□□□ -1.74
IRF9-208	ENST00000560311	PPP1R17	O96001	155 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms