RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 CT83Q5H943 113 aa12.14□□□□□ -0.47
RABGGTA-214ENST00000560163 NUDT10Q8NFP7 164 aa12.14□□□□□ -0.47
RABGGTA-214ENST00000560163 NUDT11Q96G61 164 aa12.14□□□□□ -0.47
RABGGTA-214ENST00000560163 RNASE7Q9H1E1 156 aaKnown RBP12.14□□□□□ -0.47
RABGGTA-214ENST00000560163 V9GYV3 84 aa12.13□□□□□ -0.47
RABGGTA-214ENST00000560163 MGPP08493 103 aa12.12□□□□□ -0.47
RABGGTA-214ENST00000560163 CHCHD10Q8WYQ3 142 aaPredicted RBP12.12□□□□□ -0.47
RABGGTA-214ENST00000560163 RPP21Q9H633 154 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-214ENST00000560163 FAM231BA6NCW3 169 aa12.11□□□□□ -0.47
RABGGTA-214ENST00000560163 UBE2L6O14933 153 aa12.11□□□□□ -0.47
RABGGTA-214ENST00000560163 GATCO43716 136 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-214ENST00000560163 RASL11AQ6T310 242 aa12.11□□□□□ -0.47
RABGGTA-214ENST00000560163 RPS10P5Q9NQ39 176 aa12.11□□□□□ -0.47
RABGGTA-214ENST00000560163 IMMP2LQ96T52 175 aa12.1□□□□□ -0.47
RABGGTA-214ENST00000560163 NIT2Q9NQR4 276 aa12.1□□□□□ -0.47
RABGGTA-214ENST00000560163 IGKV3OR2-268A0A0C4DH90 116 aa12.09□□□□□ -0.47
RABGGTA-214ENST00000560163 IGLC6P0CF74 106 aa12.09□□□□□ -0.47
RABGGTA-214ENST00000560163 AMTP48728 403 aa12.09□□□□□ -0.47
RABGGTA-214ENST00000560163 RPS20P60866 119 aaKnown RBP12.09□□□□□ -0.47
RABGGTA-214ENST00000560163 FOXI1Q12951 378 aa12.09□□□□□ -0.47
RABGGTA-214ENST00000560163 FAT4Q6V0I7 4981 aa12.09□□□□□ -0.47
RABGGTA-214ENST00000560163 XKRY2A2RUG3 117 aa12.08□□□□□ -0.48
RABGGTA-214ENST00000560163 A8MWL6 223 aa12.08□□□□□ -0.48
RABGGTA-214ENST00000560163 OR2D3Q8NGH3 330 aa12.08□□□□□ -0.48
RABGGTA-214ENST00000560163 COTL1Q14019 142 aa12.07□□□□□ -0.48
RABGGTA-214ENST00000560163 ZNF664Q8N3J9 261 aa12.07□□□□□ -0.48
RABGGTA-214ENST00000560163 TSKUQ8WUA8 353 aa12.07□□□□□ -0.48
RABGGTA-214ENST00000560163 SMIM27A0A1W2PRY6 76 aa12.06□□□□□ -0.48
RABGGTA-214ENST00000560163 FOXA3P55318 350 aaPredicted RBP12.06□□□□□ -0.48
RABGGTA-214ENST00000560163 LINC00526Q96FQ7 95 aa12.06□□□□□ -0.48
RABGGTA-214ENST00000560163 PSORS1C2Q9UIG4 136 aa12.06□□□□□ -0.48
RABGGTA-214ENST00000560163 PKIGQ9Y2B9 76 aa12.06□□□□□ -0.48
RABGGTA-214ENST00000560163 SMCO4Q9NRQ5 59 aa12.05□□□□□ -0.48
RABGGTA-214ENST00000560163 TRAV9-1A0A075B6T8 112 aa12.04□□□□□ -0.48
RABGGTA-214ENST00000560163 FER1L6-AS1Q8NA97 138 aa12.04□□□□□ -0.48
RABGGTA-214ENST00000560163 CARD19Q96LW7 228 aa12.04□□□□□ -0.48
RABGGTA-214ENST00000560163 KRTAP9-6A0A140TA67 174 aa12.03□□□□□ -0.48
RABGGTA-214ENST00000560163 A0A1W2PNN7 141 aa12.03□□□□□ -0.48
RABGGTA-214ENST00000560163 PTTG1IPP53801 180 aa12.03□□□□□ -0.48
RABGGTA-214ENST00000560163 CACNG7P62955 275 aa12.03□□□□□ -0.48
RABGGTA-214ENST00000560163 TPPP3Q9BW30 176 aa12.03□□□□□ -0.48
RABGGTA-214ENST00000560163 NTF3P20783 257 aa12.02□□□□□ -0.49
RABGGTA-214ENST00000560163 CTRLP40313 264 aa12.02□□□□□ -0.49
RABGGTA-214ENST00000560163 LCE2AQ5TA79 106 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-214ENST00000560163 PRR26Q8N8Z3 221 aa12.02□□□□□ -0.49
RABGGTA-214ENST00000560163 YPEL4Q96NS1 127 aa12.02□□□□□ -0.49
RABGGTA-214ENST00000560163 NAT8BQ9UHF3 227 aa12.02□□□□□ -0.49
RABGGTA-214ENST00000560163 IGHV1-58A0A0C4DH39 117 aa12.01□□□□□ -0.49
RABGGTA-214ENST00000560163 HIGD1CA8MV81 97 aa12.01□□□□□ -0.49
RABGGTA-214ENST00000560163 S100PP25815 95 aa12.01□□□□□ -0.49
RABGGTA-214ENST00000560163 CBLN2Q8IUK8 224 aa12.01□□□□□ -0.49
RABGGTA-214ENST00000560163 CNFNQ9BYD5 112 aa12.01□□□□□ -0.49
RABGGTA-214ENST00000560163 F2Z2F3 143 aa12□□□□□ -0.49
RABGGTA-214ENST00000560163 H7C423 109 aa12□□□□□ -0.49
RABGGTA-214ENST00000560163 AMMECR1LQ6DCA0 310 aa12□□□□□ -0.49
RABGGTA-214ENST00000560163 NUP35Q8NFH5 326 aa12□□□□□ -0.49
RABGGTA-214ENST00000560163 BTF3L4Q96K17 158 aa12□□□□□ -0.49
RABGGTA-214ENST00000560163 SCO1O75880 301 aa11.99□□□□□ -0.49
RABGGTA-214ENST00000560163 XCL1P47992 114 aa11.99□□□□□ -0.49
RABGGTA-214ENST00000560163 SYCNQ0VAF6 134 aa11.99□□□□□ -0.49
RABGGTA-214ENST00000560163 OR5A1Q8NGJ0 315 aa11.99□□□□□ -0.49
RABGGTA-214ENST00000560163 TRBV24-1A0A075B6N3 115 aa11.98□□□□□ -0.49
RABGGTA-214ENST00000560163 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.98□□□□□ -0.49
RABGGTA-214ENST00000560163 A0A0U1RQV1 116 aa11.98□□□□□ -0.49
RABGGTA-214ENST00000560163 IGKV2-29A2NJV5 120 aaPredicted RBP11.98□□□□□ -0.49
RABGGTA-214ENST00000560163 TRGC1P0CF51 173 aa11.98□□□□□ -0.49
RABGGTA-214ENST00000560163 FGF6P10767 208 aa11.98□□□□□ -0.49
RABGGTA-214ENST00000560163 RNASEKQ6P5S7 137 aaKnown RBP11.98□□□□□ -0.49
RABGGTA-214ENST00000560163 GATD1Q8NB37 220 aa11.98□□□□□ -0.49
RABGGTA-214ENST00000560163 TRAV26-2A0A0B4J265 109 aa11.97□□□□□ -0.49
RABGGTA-214ENST00000560163 LINC00959A0A1B0GUT2 108 aa11.97□□□□□ -0.49
RABGGTA-214ENST00000560163 CCL25O15444 150 aa11.97□□□□□ -0.49
RABGGTA-214ENST00000560163 NCR2O95944 276 aa11.97□□□□□ -0.49
RABGGTA-214ENST00000560163 GAGE2BQ13066 116 aa11.97□□□□□ -0.49
RABGGTA-214ENST00000560163 LYZL1Q6UWQ5 148 aa11.97□□□□□ -0.49
RABGGTA-214ENST00000560163 ATP5L2Q7Z4Y8 100 aa11.97□□□□□ -0.49
RABGGTA-214ENST00000560163 LOC107984640A0A0U1RRK4 108 aa11.96□□□□□ -0.49
RABGGTA-214ENST00000560163 MT-ND6P03923 174 aa11.96□□□□□ -0.49
RABGGTA-214ENST00000560163 C1orf137Q5JT78 98 aa11.96□□□□□ -0.49
RABGGTA-214ENST00000560163 A0A1B0GUT8 65 aa11.95□□□□□ -0.5
RABGGTA-214ENST00000560163 A0A1B0GW15 77 aa11.94□□□□□ -0.5
RABGGTA-214ENST00000560163 A0A1B0GXF2 115 aa11.94□□□□□ -0.5
RABGGTA-214ENST00000560163 ZNF561-AS1K7EIQ3 104 aa11.94□□□□□ -0.5
RABGGTA-214ENST00000560163 ZNF25P17030 456 aaPredicted RBP11.94□□□□□ -0.5
RABGGTA-214ENST00000560163 C9orf116Q5BN46 136 aaPredicted RBP11.94□□□□□ -0.5
RABGGTA-214ENST00000560163 BORCS7Q96B45 105 aa11.94□□□□□ -0.5
RABGGTA-214ENST00000560163 COLCA2A8K830 154 aa11.93□□□□□ -0.5
RABGGTA-214ENST00000560163 CAMPP49913 170 aa11.93□□□□□ -0.5
RABGGTA-214ENST00000560163 RIGQ13278 110 aa11.93□□□□□ -0.5
RABGGTA-214ENST00000560163 DIRC1Q969H9 104 aa11.93□□□□□ -0.5
RABGGTA-214ENST00000560163 TGIF2-C20orf24A0A0A6YYL0 155 aa11.92□□□□□ -0.5
RABGGTA-214ENST00000560163 APCSP02743 223 aa11.92□□□□□ -0.5
RABGGTA-214ENST00000560163 IGLV7-43P04211 117 aa11.92□□□□□ -0.5
RABGGTA-214ENST00000560163 S100A8P05109 93 aa11.92□□□□□ -0.5
RABGGTA-214ENST00000560163 COX19Q49B96 90 aa11.92□□□□□ -0.5
RABGGTA-214ENST00000560163 CD164L2Q6UWJ8 174 aa11.92□□□□□ -0.5
RABGGTA-214ENST00000560163 PHF5AQ7RTV0 110 aaKnown RBP11.92□□□□□ -0.5
RABGGTA-214ENST00000560163 RPL39LQ96EH5 51 aaKnown RBP11.92□□□□□ -0.5
RABGGTA-214ENST00000560163 IGLV4-69A0A075B6H9 119 aa11.91□□□□□ -0.5
RABGGTA-214ENST00000560163 HBBP68871 147 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms