RNA–Protein interactions for RNA: ENST00000559793.5

CTDSPL2-208, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-208ENST00000559793 NTF3P20783 257 aa4.91□□□□□ -1.62
CTDSPL2-208ENST00000559793 RPL35P42766 123 aaKnown RBP4.91□□□□□ -1.62
CTDSPL2-208ENST00000559793 CACNG7P62955 275 aa4.91□□□□□ -1.62
CTDSPL2-208ENST00000559793 OR2D3Q8NGH3 330 aa4.91□□□□□ -1.62
CTDSPL2-208ENST00000559793 A0A1W2PNN7 141 aa4.9□□□□□ -1.63
CTDSPL2-208ENST00000559793 C19orf71A6NCJ1 209 aa4.9□□□□□ -1.63
CTDSPL2-208ENST00000559793 FAM231BA6NCW3 169 aa4.9□□□□□ -1.63
CTDSPL2-208ENST00000559793 F2Z2F3 143 aa4.9□□□□□ -1.63
CTDSPL2-208ENST00000559793 RPS20P60866 119 aaKnown RBP4.9□□□□□ -1.63
CTDSPL2-208ENST00000559793 AMMECR1LQ6DCA0 310 aa4.9□□□□□ -1.63
CTDSPL2-208ENST00000559793 LYZL1Q6UWQ5 148 aa4.9□□□□□ -1.63
CTDSPL2-208ENST00000559793 KCNRGQ8N5I3 272 aa4.9□□□□□ -1.63
CTDSPL2-208ENST00000559793 GATD1Q8NB37 220 aa4.9□□□□□ -1.63
CTDSPL2-208ENST00000559793 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.89□□□□□ -1.63
CTDSPL2-208ENST00000559793 IGKV2-29A2NJV5 120 aaPredicted RBP4.89□□□□□ -1.63
CTDSPL2-208ENST00000559793 ARPC5O15511 151 aa4.89□□□□□ -1.63
CTDSPL2-208ENST00000559793 PFDN1O60925 122 aa4.89□□□□□ -1.63
CTDSPL2-208ENST00000559793 TRGC1P0CF51 173 aa4.89□□□□□ -1.63
CTDSPL2-208ENST00000559793 FGF6P10767 208 aa4.89□□□□□ -1.63
CTDSPL2-208ENST00000559793 XCL1P47992 114 aa4.89□□□□□ -1.63
CTDSPL2-208ENST00000559793 CCL20P78556 96 aa4.89□□□□□ -1.63
CTDSPL2-208ENST00000559793 RNASEKQ6P5S7 137 aaKnown RBP4.89□□□□□ -1.63
CTDSPL2-208ENST00000559793 C9orf62Q8N4C0 152 aa4.89□□□□□ -1.63
CTDSPL2-208ENST00000559793 OR5A1Q8NGJ0 315 aa4.89□□□□□ -1.63
CTDSPL2-208ENST00000559793 FAM213BQ8TBF2 198 aa4.89□□□□□ -1.63
CTDSPL2-208ENST00000559793 CARD19Q96LW7 228 aa4.89□□□□□ -1.63
CTDSPL2-208ENST00000559793 KRTAP2-2Q9BYT5 123 aa4.89□□□□□ -1.63
CTDSPL2-208ENST00000559793 TRAV26-2A0A0B4J265 109 aa4.88□□□□□ -1.63
CTDSPL2-208ENST00000559793 IGHV1-58A0A0C4DH39 117 aa4.88□□□□□ -1.63
CTDSPL2-208ENST00000559793 LINC00959A0A1B0GUT2 108 aa4.88□□□□□ -1.63
CTDSPL2-208ENST00000559793 RAB19A4D1S5 217 aa4.88□□□□□ -1.63
CTDSPL2-208ENST00000559793 H7C423 109 aa4.88□□□□□ -1.63
CTDSPL2-208ENST00000559793 CCL25O15444 150 aa4.88□□□□□ -1.63
CTDSPL2-208ENST00000559793 NCR2O95944 276 aa4.88□□□□□ -1.63
CTDSPL2-208ENST00000559793 SYCNQ0VAF6 134 aa4.88□□□□□ -1.63
CTDSPL2-208ENST00000559793 GAGE2BQ13066 116 aa4.88□□□□□ -1.63
CTDSPL2-208ENST00000559793 CENPWQ5EE01 88 aa4.88□□□□□ -1.63
CTDSPL2-208ENST00000559793 RPL39LQ96EH5 51 aaKnown RBP4.88□□□□□ -1.63
CTDSPL2-208ENST00000559793 PSORS1C2Q9UIG4 136 aa4.88□□□□□ -1.63
CTDSPL2-208ENST00000559793 UMAD1C9J7I0 102 aa4.87□□□□□ -1.63
CTDSPL2-208ENST00000559793 IFNA1P01562 189 aa4.87□□□□□ -1.63
CTDSPL2-208ENST00000559793 FOXA3P55318 350 aaPredicted RBP4.87□□□□□ -1.63
CTDSPL2-208ENST00000559793 ZNF664Q8N3J9 261 aa4.87□□□□□ -1.63
CTDSPL2-208ENST00000559793 C11orf52Q96A22 123 aa4.87□□□□□ -1.63
CTDSPL2-208ENST00000559793 PKIGQ9Y2B9 76 aa4.87□□□□□ -1.63
CTDSPL2-208ENST00000559793 LOC107984640A0A0U1RRK4 108 aa4.86□□□□□ -1.63
CTDSPL2-208ENST00000559793 XKRY2A2RUG3 117 aa4.86□□□□□ -1.63
CTDSPL2-208ENST00000559793 C9orf116Q5BN46 136 aaPredicted RBP4.86□□□□□ -1.63
CTDSPL2-208ENST00000559793 CTDSP1Q9GZU7 261 aa4.86□□□□□ -1.63
CTDSPL2-208ENST00000559793 TRBV20OR9-2A0A075B6H5 130 aa4.85□□□□□ -1.63
CTDSPL2-208ENST00000559793 IGLV4-69A0A075B6H9 119 aa4.85□□□□□ -1.63
CTDSPL2-208ENST00000559793 SDHAF1A6NFY7 115 aa4.85□□□□□ -1.63
CTDSPL2-208ENST00000559793 SMLR1H3BR10 107 aa4.85□□□□□ -1.63
CTDSPL2-208ENST00000559793 APCSP02743 223 aa4.85□□□□□ -1.63
CTDSPL2-208ENST00000559793 MT-ND6P03923 174 aa4.85□□□□□ -1.63
CTDSPL2-208ENST00000559793 PRSS2P07478 247 aa4.85□□□□□ -1.63
CTDSPL2-208ENST00000559793 BCL2P10415 239 aa4.85□□□□□ -1.63
CTDSPL2-208ENST00000559793 ESDP10768 282 aa4.85□□□□□ -1.63
CTDSPL2-208ENST00000559793 ZNF25P17030 456 aaPredicted RBP4.85□□□□□ -1.63
CTDSPL2-208ENST00000559793 CTRLP40313 264 aa4.85□□□□□ -1.63
CTDSPL2-208ENST00000559793 CAMPP49913 170 aa4.85□□□□□ -1.63
CTDSPL2-208ENST00000559793 GNG4P50150 75 aa4.85□□□□□ -1.63
CTDSPL2-208ENST00000559793 SS18Q15532 418 aa4.85□□□□□ -1.63
CTDSPL2-208ENST00000559793 C1orf137Q5JT78 98 aa4.85□□□□□ -1.63
CTDSPL2-208ENST00000559793 CD164L2Q6UWJ8 174 aa4.85□□□□□ -1.63
CTDSPL2-208ENST00000559793 PHF5AQ7RTV0 110 aaKnown RBP4.85□□□□□ -1.63
CTDSPL2-208ENST00000559793 CNFNQ9BYD5 112 aa4.85□□□□□ -1.63
CTDSPL2-208ENST00000559793 CDC42SE2Q9NRR3 84 aa4.85□□□□□ -1.63
CTDSPL2-208ENST00000559793 GNG13Q9P2W3 67 aa4.85□□□□□ -1.63
CTDSPL2-208ENST00000559793 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.84□□□□□ -1.63
CTDSPL2-208ENST00000559793 I3L3M4 83 aa4.84□□□□□ -1.63
CTDSPL2-208ENST00000559793 IGLV7-43P04211 117 aa4.84□□□□□ -1.63
CTDSPL2-208ENST00000559793 PMCHP20382 165 aa4.84□□□□□ -1.63
CTDSPL2-208ENST00000559793 MEF2BQ02080 365 aaPredicted RBP4.84□□□□□ -1.63
CTDSPL2-208ENST00000559793 KRTAP11-1Q8IUC1 163 aa4.84□□□□□ -1.63
CTDSPL2-208ENST00000559793 NUP35Q8NFH5 326 aa4.84□□□□□ -1.63
CTDSPL2-208ENST00000559793 TMEM18Q96B42 140 aa4.84□□□□□ -1.63
CTDSPL2-208ENST00000559793 SMIM12Q96EX1 92 aa4.84□□□□□ -1.63
CTDSPL2-208ENST00000559793 TMEM101Q96IK0 257 aa4.84□□□□□ -1.63
CTDSPL2-208ENST00000559793 BTF3L4Q96K17 158 aa4.84□□□□□ -1.63
CTDSPL2-208ENST00000559793 MANBALQ9NQG1 85 aa4.84□□□□□ -1.63
CTDSPL2-208ENST00000559793 APOMO95445 188 aa4.83□□□□□ -1.64
CTDSPL2-208ENST00000559793 TSHBP01222 138 aa4.83□□□□□ -1.64
CTDSPL2-208ENST00000559793 DIRC1Q969H9 104 aa4.83□□□□□ -1.64
CTDSPL2-208ENST00000559793 ISOC2Q96AB3 205 aa4.83□□□□□ -1.64
CTDSPL2-208ENST00000559793 OPRPNQ99935 248 aaPredicted RBP4.83□□□□□ -1.64
CTDSPL2-208ENST00000559793 TRAV1-1A0A0B4J248 108 aa4.82□□□□□ -1.64
CTDSPL2-208ENST00000559793 TRBV6-5A0A0K0K1A5 114 aa4.82□□□□□ -1.64
CTDSPL2-208ENST00000559793 KRTAP1-4P0C5Y4 121 aa4.82□□□□□ -1.64
CTDSPL2-208ENST00000559793 EIF5AP63241 154 aaKnown RBP4.82□□□□□ -1.64
CTDSPL2-208ENST00000559793 ZNF345Q14585 488 aa4.82□□□□□ -1.64
CTDSPL2-208ENST00000559793 PRR4Q16378 134 aa4.82□□□□□ -1.64
CTDSPL2-208ENST00000559793 EIF5AL1Q6IS14 154 aaKnown RBP4.82□□□□□ -1.64
CTDSPL2-208ENST00000559793 TEX261Q6UWH6 196 aa4.82□□□□□ -1.64
CTDSPL2-208ENST00000559793 MRPL52Q86TS9 123 aaKnown RBP4.82□□□□□ -1.64
CTDSPL2-208ENST00000559793 CAMK2N2Q96S95 79 aa4.82□□□□□ -1.64
CTDSPL2-208ENST00000559793 RNASE7Q9H1E1 156 aaKnown RBP4.82□□□□□ -1.64
CTDSPL2-208ENST00000559793 BIN3Q9NQY0 253 aa4.82□□□□□ -1.64
CTDSPL2-208ENST00000559793 MED9Q9NWA0 146 aa4.82□□□□□ -1.64
CTDSPL2-208ENST00000559793 A0A087WZ39 114 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms