RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 CHAC1Q9BUX1 264 aa7.08□□□□□ -1.28
SPG11-216ENST00000559347 GAGE12HA6NDE8 117 aa7.07□□□□□ -1.28
SPG11-216ENST00000559347 PPP1R2P9O14990 202 aa7.07□□□□□ -1.28
SPG11-216ENST00000559347 PPP1R17O96001 155 aa7.07□□□□□ -1.28
SPG11-216ENST00000559347 INAFM2P0DMQ5 153 aa7.07□□□□□ -1.28
SPG11-216ENST00000559347 RAB14P61106 215 aa7.07□□□□□ -1.28
SPG11-216ENST00000559347 CNBPP62633 177 aaKnown RBP7.07□□□□□ -1.28
SPG11-216ENST00000559347 HBBP68871 147 aa7.07□□□□□ -1.28
SPG11-216ENST00000559347 MRPL52Q86TS9 123 aaKnown RBP7.07□□□□□ -1.28
SPG11-216ENST00000559347 C15orf56Q8N910 161 aa7.07□□□□□ -1.28
SPG11-216ENST00000559347 OR5A1Q8NGJ0 315 aa7.07□□□□□ -1.28
SPG11-216ENST00000559347 CHCHD10Q8WYQ3 142 aaPredicted RBP7.07□□□□□ -1.28
SPG11-216ENST00000559347 hDV102S1A0JD36 115 aa7.06□□□□□ -1.28
SPG11-216ENST00000559347 LINC00862A6NCI5 91 aa7.06□□□□□ -1.28
SPG11-216ENST00000559347 S100A8P05109 93 aa7.06□□□□□ -1.28
SPG11-216ENST00000559347 PNRC1Q12796 327 aaPredicted RBP7.06□□□□□ -1.28
SPG11-216ENST00000559347 CIRBP-AS1Q8TBR5 109 aa7.06□□□□□ -1.28
SPG11-216ENST00000559347 TMEM101Q96IK0 257 aa7.06□□□□□ -1.28
SPG11-216ENST00000559347 BTF3L4Q96K17 158 aa7.06□□□□□ -1.28
SPG11-216ENST00000559347 HERC1Q15751 4861 aa7.06□□□□□ -1.28
SPG11-216ENST00000559347 TRBV24-1A0A075B6N3 115 aa7.05□□□□□ -1.28
SPG11-216ENST00000559347 VCYO14598 125 aa7.05□□□□□ -1.28
SPG11-216ENST00000559347 FCER1GP30273 86 aa7.05□□□□□ -1.28
SPG11-216ENST00000559347 CLLU1Q5K131 121 aa7.05□□□□□ -1.28
SPG11-216ENST00000559347 ATP5L2Q7Z4Y8 100 aa7.05□□□□□ -1.28
SPG11-216ENST00000559347 KIR2DL4Q99706 377 aa7.05□□□□□ -1.28
SPG11-216ENST00000559347 D6R8Y8 96 aa7.04□□□□□ -1.28
SPG11-216ENST00000559347 F8W036 122 aa7.04□□□□□ -1.28
SPG11-216ENST00000559347 TNFRSF6BO95407 300 aa7.04□□□□□ -1.28
SPG11-216ENST00000559347 CKS2P33552 79 aa7.04□□□□□ -1.28
SPG11-216ENST00000559347 RPL32P62910 135 aaKnown RBP7.04□□□□□ -1.28
SPG11-216ENST00000559347 FOXI1Q12951 378 aa7.04□□□□□ -1.28
SPG11-216ENST00000559347 C20orf78Q9BR46 151 aa7.04□□□□□ -1.28
SPG11-216ENST00000559347 CDC42SE2Q9NRR3 84 aa7.04□□□□□ -1.28
SPG11-216ENST00000559347 AP5S1Q9NUS5 200 aa7.04□□□□□ -1.28
SPG11-216ENST00000559347 UBE2D4Q9Y2X8 147 aa7.04□□□□□ -1.28
SPG11-216ENST00000559347 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.04□□□□□ -1.28
SPG11-216ENST00000559347 FLG2Q5D862 2391 aaPredicted RBP7.03□□□□□ -1.28
SPG11-216ENST00000559347 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.03□□□□□ -1.28
SPG11-216ENST00000559347 LINC00959A0A1B0GUT2 108 aa7.03□□□□□ -1.28
SPG11-216ENST00000559347 PANO1I0J062 215 aa7.03□□□□□ -1.28
SPG11-216ENST00000559347 CCL25O15444 150 aa7.03□□□□□ -1.28
SPG11-216ENST00000559347 NPYP01303 97 aa7.03□□□□□ -1.28
SPG11-216ENST00000559347 SLPIP03973 132 aa7.03□□□□□ -1.28
SPG11-216ENST00000559347 PLA2G1BP04054 148 aaKnown RBP7.03□□□□□ -1.28
SPG11-216ENST00000559347 XCL1P47992 114 aa7.03□□□□□ -1.28
SPG11-216ENST00000559347 IFITM2Q01629 132 aa7.03□□□□□ -1.28
SPG11-216ENST00000559347 SDIM1Q6ZPB5 146 aa7.03□□□□□ -1.28
SPG11-216ENST00000559347 ZNF664Q8N3J9 261 aa7.03□□□□□ -1.28
SPG11-216ENST00000559347 SMIM2Q9BVW6 85 aa7.03□□□□□ -1.28
SPG11-216ENST00000559347 DMBT1Q9UGM3 2413 aaPredicted RBP7.02□□□□□ -1.28
SPG11-216ENST00000559347 GVQW2A0A096LPI5 108 aaPredicted RBP7.02□□□□□ -1.29
SPG11-216ENST00000559347 KRTAP10-4P60372 401 aaPredicted RBP7.02□□□□□ -1.29
SPG11-216ENST00000559347 HIGD2BQ4VC39 106 aa7.02□□□□□ -1.29
SPG11-216ENST00000559347 ANAPC16Q96DE5 110 aa7.02□□□□□ -1.29
SPG11-216ENST00000559347 CSDC2Q9Y534 153 aaKnown RBP7.02□□□□□ -1.29
SPG11-216ENST00000559347 IGHV3-64A0A075B6Q5 118 aa7.01□□□□□ -1.29
SPG11-216ENST00000559347 PHOX2AO14813 284 aa7.01□□□□□ -1.29
SPG11-216ENST00000559347 TCAPO15273 167 aa7.01□□□□□ -1.29
SPG11-216ENST00000559347 PPBPP02775 128 aa7.01□□□□□ -1.29
SPG11-216ENST00000559347 MT-ND4LP03901 98 aa7.01□□□□□ -1.29
SPG11-216ENST00000559347 ADCYAP1P18509 176 aa7.01□□□□□ -1.29
SPG11-216ENST00000559347 SMAGPQ0VAQ4 97 aa7.01□□□□□ -1.29
SPG11-216ENST00000559347 CIRBPQ14011 172 aaKnown RBP7.01□□□□□ -1.29
SPG11-216ENST00000559347 Q6ZUT4 128 aa7.01□□□□□ -1.29
SPG11-216ENST00000559347 ORMDL3Q8N138 153 aa7.01□□□□□ -1.29
SPG11-216ENST00000559347 RPL39P62891 51 aaKnown RBP7□□□□□ -1.29
SPG11-216ENST00000559347 SS18Q15532 418 aa7□□□□□ -1.29
SPG11-216ENST00000559347 RNASE13Q5GAN3 156 aaKnown RBP7□□□□□ -1.29
SPG11-216ENST00000559347 CD164L2Q6UWJ8 174 aa7□□□□□ -1.29
SPG11-216ENST00000559347 TMEM18Q96B42 140 aa7□□□□□ -1.29
SPG11-216ENST00000559347 TIMM21Q9BVV7 248 aa7□□□□□ -1.29
SPG11-216ENST00000559347 UQCC3Q6UW78 93 aa6.99□□□□□ -1.29
SPG11-216ENST00000559347 PRELID3AQ96N28 172 aa6.99□□□□□ -1.29
SPG11-216ENST00000559347 FAT3Q8TDW7 4589 aa6.99□□□□□ -1.29
SPG11-216ENST00000559347 IGHV1-58A0A0C4DH39 117 aa6.98□□□□□ -1.29
SPG11-216ENST00000559347 C1orf196B1AJZ1 125 aa6.98□□□□□ -1.29
SPG11-216ENST00000559347 CHTF8P0CG12 524 aa6.98□□□□□ -1.29
SPG11-216ENST00000559347 TMEM136Q6ZRR5 245 aa6.98□□□□□ -1.29
SPG11-216ENST00000559347 SPACA4Q8TDM5 124 aa6.98□□□□□ -1.29
SPG11-216ENST00000559347 SPANXA1Q9NS26 97 aa6.98□□□□□ -1.29
SPG11-216ENST00000559347 LRP1Q07954 4544 aaKnown RBP6.97□□□□□ -1.29
SPG11-216ENST00000559347 TRAV13-1A0A0B4J241 112 aa6.97□□□□□ -1.29
SPG11-216ENST00000559347 C21orf62-AS1Q17RA5 79 aa6.97□□□□□ -1.29
SPG11-216ENST00000559347 FAM104AQ969W3 186 aa6.97□□□□□ -1.29
SPG11-216ENST00000559347 LAMTOR2Q9Y2Q5 125 aa6.97□□□□□ -1.29
SPG11-216ENST00000559347 TMEM218A2RU14 115 aa6.96□□□□□ -1.3
SPG11-216ENST00000559347 RPL37AP61513 92 aaKnown RBP6.96□□□□□ -1.3
SPG11-216ENST00000559347 MRPS36P82909 103 aaKnown RBP6.96□□□□□ -1.3
SPG11-216ENST00000559347 COX6A2Q02221 97 aa6.96□□□□□ -1.3
SPG11-216ENST00000559347 LINC00526Q96FQ7 95 aa6.96□□□□□ -1.3
SPG11-216ENST00000559347 A0A087WYN8 130 aa6.95□□□□□ -1.3
SPG11-216ENST00000559347 COX7A2LO14548 114 aa6.95□□□□□ -1.3
SPG11-216ENST00000559347 GHRHP01286 108 aa6.95□□□□□ -1.3
SPG11-216ENST00000559347 PRSS3P2Q8NHM4 247 aa6.95□□□□□ -1.3
SPG11-216ENST00000559347 CARD19Q96LW7 228 aa6.95□□□□□ -1.3
SPG11-216ENST00000559347 IMMP2LQ96T52 175 aa6.95□□□□□ -1.3
SPG11-216ENST00000559347 OPRPNQ99935 248 aaPredicted RBP6.95□□□□□ -1.3
SPG11-216ENST00000559347 SEC11CQ9BY50 192 aa6.95□□□□□ -1.3
SPG11-216ENST00000559347 MAP1LC3AQ9H492 121 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms