RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 ANAPC11Q9NYG5 84 aa1.89□□□□□ -2.11
LRRC28-212ENST00000558911 DUOX1Q9NRD9 1551 aa1.89□□□□□ -2.11
LRRC28-212ENST00000558911 KIAA1549Q9HCM3 1950 aa1.89□□□□□ -2.11
LRRC28-212ENST00000558911 SCN3AQ9NY46 2000 aa1.88□□□□□ -2.11
LRRC28-212ENST00000558911 KTN1Q86UP2 1357 aaKnown RBP1.88□□□□□ -2.11
LRRC28-212ENST00000558911 IGKV3D-11A0A0A0MRZ8 115 aa1.88□□□□□ -2.11
LRRC28-212ENST00000558911 IGHV1-24A0A0C4DH33 117 aa1.88□□□□□ -2.11
LRRC28-212ENST00000558911 IBA57-AS1B1ANH7 110 aa1.88□□□□□ -2.11
LRRC28-212ENST00000558911 EDF1O60869 148 aaKnown RBP1.88□□□□□ -2.11
LRRC28-212ENST00000558911 TNFP01375 233 aa1.88□□□□□ -2.11
LRRC28-212ENST00000558911 CTSGP08311 255 aa1.88□□□□□ -2.11
LRRC28-212ENST00000558911 BAALC-AS2P0C853 105 aa1.88□□□□□ -2.11
LRRC28-212ENST00000558911 S100A10P60903 97 aa1.88□□□□□ -2.11
LRRC28-212ENST00000558911 LY6EQ16553 131 aa1.88□□□□□ -2.11
LRRC28-212ENST00000558911 C9orf153Q5TBE3 101 aa1.88□□□□□ -2.11
LRRC28-212ENST00000558911 LINC01545Q5VT33 79 aa1.88□□□□□ -2.11
LRRC28-212ENST00000558911 PP632Q6XCG6 107 aa1.88□□□□□ -2.11
LRRC28-212ENST00000558911 ARPINQ7Z6K5 226 aa1.88□□□□□ -2.11
LRRC28-212ENST00000558911 SMR3AQ99954 134 aa1.88□□□□□ -2.11
LRRC28-212ENST00000558911 AGPAT4-IT1Q9H0P7 198 aa1.88□□□□□ -2.11
LRRC28-212ENST00000558911 TAS2R8Q9NYW2 309 aa1.88□□□□□ -2.11
LRRC28-212ENST00000558911 NOP16Q9Y3C1 178 aaKnown RBP1.88□□□□□ -2.11
LRRC28-212ENST00000558911 HUWE1Q7Z6Z7 4374 aaKnown RBP1.88□□□□□ -2.11
LRRC28-212ENST00000558911 MDN1Q9NU22 5596 aa1.88□□□□□ -2.11
LRRC28-212ENST00000558911 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
LRRC28-212ENST00000558911 MUC21A0A0G2JKD1 596 aa1.87□□□□□ -2.11
LRRC28-212ENST00000558911 MUC21A0A140T8X8 626 aa1.87□□□□□ -2.11
LRRC28-212ENST00000558911 PVALEFA0A1B0GWK0 134 aa1.87□□□□□ -2.11
LRRC28-212ENST00000558911 ZNF705FA8MVS1 300 aaPredicted RBP1.87□□□□□ -2.11
LRRC28-212ENST00000558911 GEMIN2O14893 280 aaKnown RBP1.87□□□□□ -2.11
LRRC28-212ENST00000558911 HYPMO75409 117 aa1.87□□□□□ -2.11
LRRC28-212ENST00000558911 UBL3O95164 117 aa1.87□□□□□ -2.11
LRRC28-212ENST00000558911 MIFP14174 115 aa1.87□□□□□ -2.11
LRRC28-212ENST00000558911 RPL26P61254 145 aaKnown RBP1.87□□□□□ -2.11
LRRC28-212ENST00000558911 KRTAP6-3Q3LI67 103 aa1.87□□□□□ -2.11
LRRC28-212ENST00000558911 CMTM2Q8TAZ6 248 aa1.87□□□□□ -2.11
LRRC28-212ENST00000558911 TMEM254Q8TBM7 123 aa1.87□□□□□ -2.11
LRRC28-212ENST00000558911 PSMF1Q92530 271 aa1.87□□□□□ -2.11
LRRC28-212ENST00000558911 LSM10Q969L4 123 aaKnown RBP1.87□□□□□ -2.11
LRRC28-212ENST00000558911 Q9BRP9 147 aa1.87□□□□□ -2.11
LRRC28-212ENST00000558911 SNHG12Q9BXW3 62 aa1.87□□□□□ -2.11
LRRC28-212ENST00000558911 RPRMQ9NS64 109 aa1.87□□□□□ -2.11
LRRC28-212ENST00000558911 NDUFB11Q9NX14 153 aa1.87□□□□□ -2.11
LRRC28-212ENST00000558911 IER3IP1Q9Y5U9 82 aa1.87□□□□□ -2.11
LRRC28-212ENST00000558911 CHCHD2Q9Y6H1 151 aaPredicted RBP1.87□□□□□ -2.11
LRRC28-212ENST00000558911 SERP1Q9Y6X1 66 aa1.87□□□□□ -2.11
LRRC28-212ENST00000558911 KIAA1549LQ6ZVL6 1849 aa1.87□□□□□ -2.11
LRRC28-212ENST00000558911 PLXNA4Q9HCM2 1894 aa1.86□□□□□ -2.11
LRRC28-212ENST00000558911 IGKV2-28A0A075B6P5 120 aa1.86□□□□□ -2.11
LRRC28-212ENST00000558911 MCRIP1C9JLW8 97 aa1.86□□□□□ -2.11
LRRC28-212ENST00000558911 J3QLW9 94 aa1.86□□□□□ -2.11
LRRC28-212ENST00000558911 MPC2O95563 127 aa1.86□□□□□ -2.11
LRRC28-212ENST00000558911 IGKV2D-28P01615 120 aa1.86□□□□□ -2.11
LRRC28-212ENST00000558911 DSCR4P56555 118 aaPredicted RBP1.86□□□□□ -2.11
LRRC28-212ENST00000558911 PLECQ15149 4684 aaKnown RBP1.86□□□□□ -2.11
LRRC28-212ENST00000558911 ASB16-AS1Q495Z4 193 aa1.86□□□□□ -2.11
LRRC28-212ENST00000558911 Q56UQ5 140 aa1.86□□□□□ -2.11
LRRC28-212ENST00000558911 CASC2Q6XLA1 102 aa1.86□□□□□ -2.11
LRRC28-212ENST00000558911 LINC00269Q8N2A0 174 aa1.86□□□□□ -2.11
LRRC28-212ENST00000558911 SVBPQ8N300 66 aa1.86□□□□□ -2.11
LRRC28-212ENST00000558911 ATP6V0E2Q8NHE4 81 aa1.86□□□□□ -2.11
LRRC28-212ENST00000558911 VSTM2AQ8TAG5 236 aa1.86□□□□□ -2.11
LRRC28-212ENST00000558911 Q96M85 177 aa1.86□□□□□ -2.11
LRRC28-212ENST00000558911 SMIM7Q9BQ49 75 aa1.86□□□□□ -2.11
LRRC28-212ENST00000558911 PRO2289Q9P1D8 64 aa1.86□□□□□ -2.11
LRRC28-212ENST00000558911 LHFPL6Q9Y693 200 aa1.86□□□□□ -2.11
LRRC28-212ENST00000558911 MCM3APO60318 1980 aa1.86□□□□□ -2.11
LRRC28-212ENST00000558911 EML5Q05BV3 1969 aa1.85□□□□□ -2.11
LRRC28-212ENST00000558911 SEC16AO15027 2179 aa1.85□□□□□ -2.11
LRRC28-212ENST00000558911 IGLV10-54A0A075B6I4 117 aa1.85□□□□□ -2.11
LRRC28-212ENST00000558911 TRAV10A0A0B4J240 114 aa1.85□□□□□ -2.11
LRRC28-212ENST00000558911 LRCOL1A6NCL2 159 aa1.85□□□□□ -2.11
LRRC28-212ENST00000558911 E7EUB6 86 aa1.85□□□□□ -2.11
LRRC28-212ENST00000558911 ERC2-IT1O76042 136 aa1.85□□□□□ -2.11
LRRC28-212ENST00000558911 SPINK8P0C7L1 97 aa1.85□□□□□ -2.11
LRRC28-212ENST00000558911 COL5A1-AS1Q5SY13 56 aa1.85□□□□□ -2.11
LRRC28-212ENST00000558911 Q6AWC8 147 aa1.85□□□□□ -2.11
LRRC28-212ENST00000558911 ATP11AUNQ6ZP68 121 aa1.85□□□□□ -2.11
LRRC28-212ENST00000558911 ZCCHC23Q6ZST2 131 aa1.85□□□□□ -2.11
LRRC28-212ENST00000558911 CLECL1Q8IZS7 167 aa1.85□□□□□ -2.11
LRRC28-212ENST00000558911 C9orf163Q8N9P6 203 aa1.85□□□□□ -2.11
LRRC28-212ENST00000558911 C5orf17Q8NAS9 161 aa1.85□□□□□ -2.11
LRRC28-212ENST00000558911 Q8TAT8 98 aa1.85□□□□□ -2.11
LRRC28-212ENST00000558911 SFT2D1Q8WV19 159 aa1.85□□□□□ -2.11
LRRC28-212ENST00000558911 PSORS1C2Q9UIG4 136 aa1.85□□□□□ -2.11
LRRC28-212ENST00000558911 CCL26Q9Y258 94 aa1.85□□□□□ -2.11
LRRC28-212ENST00000558911 ANK1P16157 1881 aa1.85□□□□□ -2.11
LRRC28-212ENST00000558911 KIAA2026Q5HYC2 2103 aa1.85□□□□□ -2.11
LRRC28-212ENST00000558911 LRP1Q07954 4544 aaKnown RBP1.85□□□□□ -2.11
LRRC28-212ENST00000558911 MICAL3Q7RTP6 2002 aa1.84□□□□□ -2.11
LRRC28-212ENST00000558911 ABCA1O95477 2261 aa1.84□□□□□ -2.11
LRRC28-212ENST00000558911 TRAV12-1A0A0B4J245 112 aa1.84□□□□□ -2.11
LRRC28-212ENST00000558911 OOSP1A8MZH6 123 aa1.84□□□□□ -2.11
LRRC28-212ENST00000558911 APOC4-APOC2K7ER74 178 aa1.84□□□□□ -2.11
LRRC28-212ENST00000558911 APOC2P02655 101 aa1.84□□□□□ -2.11
LRRC28-212ENST00000558911 IL5P05113 134 aa1.84□□□□□ -2.11
LRRC28-212ENST00000558911 P0C880 135 aa1.84□□□□□ -2.11
LRRC28-212ENST00000558911 IFITM1P13164 125 aa1.84□□□□□ -2.11
LRRC28-212ENST00000558911 LINC00315P59091 139 aa1.84□□□□□ -2.11
LRRC28-212ENST00000558911 Q6ZS92 163 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms