RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 CHCHD10Q8WYQ3 142 aaPredicted RBP7.16□□□□□ -1.26
PBX1-213ENST00000558796 KIR2DL4Q99706 377 aa7.16□□□□□ -1.26
PBX1-213ENST00000558796 SRRM2Q9UQ35 2752 aaKnown RBP7.16□□□□□ -1.26
PBX1-213ENST00000558796 hDV102S1A0JD36 115 aa7.15□□□□□ -1.26
PBX1-213ENST00000558796 TMEM218A2RU14 115 aa7.15□□□□□ -1.26
PBX1-213ENST00000558796 EPM2AB3EWF7 344 aa7.15□□□□□ -1.26
PBX1-213ENST00000558796 MRPL52Q86TS9 123 aaKnown RBP7.15□□□□□ -1.26
PBX1-213ENST00000558796 C20orf78Q9BR46 151 aa7.15□□□□□ -1.26
PBX1-213ENST00000558796 SMIM2Q9BVW6 85 aa7.15□□□□□ -1.26
PBX1-213ENST00000558796 TRBV24-1A0A075B6N3 115 aa7.14□□□□□ -1.27
PBX1-213ENST00000558796 RNASE13Q5GAN3 156 aaKnown RBP7.14□□□□□ -1.27
PBX1-213ENST00000558796 LINC00959A0A1B0GUT2 108 aa7.13□□□□□ -1.27
PBX1-213ENST00000558796 PPBPP02775 128 aa7.13□□□□□ -1.27
PBX1-213ENST00000558796 XCL1P47992 114 aa7.13□□□□□ -1.27
PBX1-213ENST00000558796 RPL32P62910 135 aaKnown RBP7.13□□□□□ -1.27
PBX1-213ENST00000558796 DGAT2L7PQ6IED9 249 aa7.13□□□□□ -1.27
PBX1-213ENST00000558796 SCXQ7RTU7 201 aa7.13□□□□□ -1.27
PBX1-213ENST00000558796 ORMDL3Q8N138 153 aa7.13□□□□□ -1.27
PBX1-213ENST00000558796 C15orf56Q8N910 161 aa7.13□□□□□ -1.27
PBX1-213ENST00000558796 CLRN3Q8NCR9 226 aa7.13□□□□□ -1.27
PBX1-213ENST00000558796 PRELID3AQ96N28 172 aa7.13□□□□□ -1.27
PBX1-213ENST00000558796 CDC42SE2Q9NRR3 84 aa7.13□□□□□ -1.27
PBX1-213ENST00000558796 UBE2D4Q9Y2X8 147 aa7.13□□□□□ -1.27
PBX1-213ENST00000558796 PHOX2AO14813 284 aa7.12□□□□□ -1.27
PBX1-213ENST00000558796 TCAPO15273 167 aa7.12□□□□□ -1.27
PBX1-213ENST00000558796 CCL25O15444 150 aa7.12□□□□□ -1.27
PBX1-213ENST00000558796 RPL39P62891 51 aaKnown RBP7.12□□□□□ -1.27
PBX1-213ENST00000558796 FOXI1Q12951 378 aa7.12□□□□□ -1.27
PBX1-213ENST00000558796 HIGD2BQ4VC39 106 aa7.12□□□□□ -1.27
PBX1-213ENST00000558796 TMEM136Q6ZRR5 245 aa7.12□□□□□ -1.27
PBX1-213ENST00000558796 Q6ZUT4 128 aa7.12□□□□□ -1.27
PBX1-213ENST00000558796 ZNF664Q8N3J9 261 aa7.12□□□□□ -1.27
PBX1-213ENST00000558796 FLG2Q5D862 2391 aaPredicted RBP7.11□□□□□ -1.27
PBX1-213ENST00000558796 SEC11CQ9BY50 192 aa7.11□□□□□ -1.27
PBX1-213ENST00000558796 AP5S1Q9NUS5 200 aa7.11□□□□□ -1.27
PBX1-213ENST00000558796 FAM229AH3BQW9 127 aa7.1□□□□□ -1.27
PBX1-213ENST00000558796 SLPIP03973 132 aa7.1□□□□□ -1.27
PBX1-213ENST00000558796 CNBPP62633 177 aaKnown RBP7.1□□□□□ -1.27
PBX1-213ENST00000558796 SMAGPQ0VAQ4 97 aa7.1□□□□□ -1.27
PBX1-213ENST00000558796 SS18Q15532 418 aa7.1□□□□□ -1.27
PBX1-213ENST00000558796 C9orf163Q8N9P6 203 aa7.1□□□□□ -1.27
PBX1-213ENST00000558796 TMEM18Q96B42 140 aa7.1□□□□□ -1.27
PBX1-213ENST00000558796 CHAC1Q9BUX1 264 aa7.1□□□□□ -1.27
PBX1-213ENST00000558796 MYCBP2O75592 4640 aa7.09□□□□□ -1.27
PBX1-213ENST00000558796 TRAV13-1A0A0B4J241 112 aa7.09□□□□□ -1.27
PBX1-213ENST00000558796 LOC389332A0A1B0GUA5 103 aa7.09□□□□□ -1.27
PBX1-213ENST00000558796 CFAP161Q6P656 301 aa7.09□□□□□ -1.27
PBX1-213ENST00000558796 LINC00528Q8N1L1 170 aa7.09□□□□□ -1.27
PBX1-213ENST00000558796 CIRBP-AS1Q8TBR5 109 aa7.09□□□□□ -1.27
PBX1-213ENST00000558796 IMMP2LQ96T52 175 aa7.09□□□□□ -1.27
PBX1-213ENST00000558796 TIMM21Q9BVV7 248 aa7.09□□□□□ -1.27
PBX1-213ENST00000558796 CTDSP1Q9GZU7 261 aa7.09□□□□□ -1.27
PBX1-213ENST00000558796 MAP1LC3AQ9H492 121 aa7.09□□□□□ -1.27
PBX1-213ENST00000558796 CSDC2Q9Y534 153 aaKnown RBP7.09□□□□□ -1.27
PBX1-213ENST00000558796 GVQW2A0A096LPI5 108 aaPredicted RBP7.08□□□□□ -1.28
PBX1-213ENST00000558796 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.08□□□□□ -1.28
PBX1-213ENST00000558796 PANO1I0J062 215 aa7.08□□□□□ -1.28
PBX1-213ENST00000558796 RAB5AP20339 215 aa7.08□□□□□ -1.28
PBX1-213ENST00000558796 CD164L2Q6UWJ8 174 aa7.08□□□□□ -1.28
PBX1-213ENST00000558796 OPRPNQ99935 248 aaPredicted RBP7.08□□□□□ -1.28
PBX1-213ENST00000558796 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.08□□□□□ -1.28
PBX1-213ENST00000558796 IGHV3-64A0A075B6Q5 118 aa7.07□□□□□ -1.28
PBX1-213ENST00000558796 INAFM2P0DMQ5 153 aa7.07□□□□□ -1.28
PBX1-213ENST00000558796 SDIM1Q6ZPB5 146 aa7.07□□□□□ -1.28
PBX1-213ENST00000558796 FAM104AQ969W3 186 aa7.07□□□□□ -1.28
PBX1-213ENST00000558796 LINC00526Q96FQ7 95 aa7.07□□□□□ -1.28
PBX1-213ENST00000558796 SPANXA1Q9NS26 97 aa7.07□□□□□ -1.28
PBX1-213ENST00000558796 LAMTOR2Q9Y2Q5 125 aa7.07□□□□□ -1.28
PBX1-213ENST00000558796 IGHV1-58A0A0C4DH39 117 aa7.06□□□□□ -1.28
PBX1-213ENST00000558796 C1orf196B1AJZ1 125 aa7.06□□□□□ -1.28
PBX1-213ENST00000558796 CHTF8P0CG12 524 aa7.06□□□□□ -1.28
PBX1-213ENST00000558796 S100PP25815 95 aa7.06□□□□□ -1.28
PBX1-213ENST00000558796 KIAA1644Q3SXP7 199 aa7.06□□□□□ -1.28
PBX1-213ENST00000558796 C10orf91Q5T1B1 145 aa7.06□□□□□ -1.28
PBX1-213ENST00000558796 CARHSP1Q9Y2V2 147 aaKnown RBP7.06□□□□□ -1.28
PBX1-213ENST00000558796 PKHD1L1Q86WI1 4243 aa7.05□□□□□ -1.28
PBX1-213ENST00000558796 TRAV9-1A0A075B6T8 112 aa7.05□□□□□ -1.28
PBX1-213ENST00000558796 IFITM10A6NMD0 228 aa7.05□□□□□ -1.28
PBX1-213ENST00000558796 PRSS47A8MTI9 375 aa7.05□□□□□ -1.28
PBX1-213ENST00000558796 COX7A2LO14548 114 aa7.05□□□□□ -1.28
PBX1-213ENST00000558796 MALP21145 153 aa7.05□□□□□ -1.28
PBX1-213ENST00000558796 RHEBQ15382 184 aa7.05□□□□□ -1.28
PBX1-213ENST00000558796 Q8N8P6 123 aa7.05□□□□□ -1.28
PBX1-213ENST00000558796 RPS10P5Q9NQ39 176 aa7.05□□□□□ -1.28
PBX1-213ENST00000558796 DMBT1Q9UGM3 2413 aaPredicted RBP7.04□□□□□ -1.28
PBX1-213ENST00000558796 PLA2G1BP04054 148 aaKnown RBP7.04□□□□□ -1.28
PBX1-213ENST00000558796 IFI27P40305 119 aaPredicted RBP7.04□□□□□ -1.28
PBX1-213ENST00000558796 MRPS36P82909 103 aaKnown RBP7.04□□□□□ -1.28
PBX1-213ENST00000558796 C5orf38Q86SI9 138 aa7.04□□□□□ -1.28
PBX1-213ENST00000558796 IGLV4-3A0A075B6K6 122 aa7.03□□□□□ -1.28
PBX1-213ENST00000558796 ZNF561-AS1K7EIQ3 104 aa7.03□□□□□ -1.28
PBX1-213ENST00000558796 COX6A2Q02221 97 aa7.03□□□□□ -1.28
PBX1-213ENST00000558796 PRSS3P2Q8NHM4 247 aa7.03□□□□□ -1.28
PBX1-213ENST00000558796 CARD19Q96LW7 228 aa7.03□□□□□ -1.28
PBX1-213ENST00000558796 IGKV2-24A0A0C4DH68 120 aa7.02□□□□□ -1.29
PBX1-213ENST00000558796 APOC3P02656 99 aa7.02□□□□□ -1.29
PBX1-213ENST00000558796 CIRBPQ14011 172 aaKnown RBP7.02□□□□□ -1.29
PBX1-213ENST00000558796 C2orf66Q6UXQ4 117 aa7.02□□□□□ -1.29
PBX1-213ENST00000558796 SPACA4Q8TDM5 124 aa7.02□□□□□ -1.29
PBX1-213ENST00000558796 TMEM141Q96I45 108 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms