RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 CFAP161Q6P656 301 aa5.98□□□□□ -1.45
SPG11-212ENST00000558790 RASL11AQ6T310 242 aa5.98□□□□□ -1.45
SPG11-212ENST00000558790 REG3GQ6UW15 175 aa5.98□□□□□ -1.45
SPG11-212ENST00000558790 SPINK6Q6UWN8 80 aa5.98□□□□□ -1.45
SPG11-212ENST00000558790 FER1L6-AS1Q8NA97 138 aa5.98□□□□□ -1.45
SPG11-212ENST00000558790 ARPC5O15511 151 aa5.97□□□□□ -1.45
SPG11-212ENST00000558790 COTL1Q14019 142 aa5.97□□□□□ -1.45
SPG11-212ENST00000558790 FAM213BQ8TBF2 198 aa5.97□□□□□ -1.45
SPG11-212ENST00000558790 SFT2D1Q8WV19 159 aa5.97□□□□□ -1.45
SPG11-212ENST00000558790 CHCHD10Q8WYQ3 142 aaPredicted RBP5.97□□□□□ -1.45
SPG11-212ENST00000558790 CACNG7P62955 275 aa5.96□□□□□ -1.46
SPG11-212ENST00000558790 CENPWQ5EE01 88 aa5.96□□□□□ -1.46
SPG11-212ENST00000558790 TMUB2Q71RG4 321 aa5.96□□□□□ -1.46
SPG11-212ENST00000558790 OR2D3Q8NGH3 330 aa5.96□□□□□ -1.46
SPG11-212ENST00000558790 MBD3L1Q8WWY6 194 aa5.96□□□□□ -1.46
SPG11-212ENST00000558790 NIT2Q9NQR4 276 aa5.96□□□□□ -1.46
SPG11-212ENST00000558790 C19orf71A6NCJ1 209 aa5.95□□□□□ -1.46
SPG11-212ENST00000558790 SRSF9Q13242 221 aaKnown RBP eCLIP5.95□□□□□ -1.46
SPG11-212ENST00000558790 KCNRGQ8N5I3 272 aa5.95□□□□□ -1.46
SPG11-212ENST00000558790 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.94□□□□□ -1.46
SPG11-212ENST00000558790 TRAV26-2A0A0B4J265 109 aa5.94□□□□□ -1.46
SPG11-212ENST00000558790 IGKV2-29A2NJV5 120 aaPredicted RBP5.94□□□□□ -1.46
SPG11-212ENST00000558790 TRGC1P0CF51 173 aa5.94□□□□□ -1.46
SPG11-212ENST00000558790 NTF3P20783 257 aa5.94□□□□□ -1.46
SPG11-212ENST00000558790 RPS20P60866 119 aaKnown RBP5.94□□□□□ -1.46
SPG11-212ENST00000558790 AMMECR1LQ6DCA0 310 aa5.94□□□□□ -1.46
SPG11-212ENST00000558790 Q6ZRP5 223 aa5.94□□□□□ -1.46
SPG11-212ENST00000558790 C11orf52Q96A22 123 aa5.94□□□□□ -1.46
SPG11-212ENST00000558790 LINC00526Q96FQ7 95 aa5.94□□□□□ -1.46
SPG11-212ENST00000558790 CARD19Q96LW7 228 aa5.94□□□□□ -1.46
SPG11-212ENST00000558790 LINC00474Q9P2X8 69 aa5.94□□□□□ -1.46
SPG11-212ENST00000558790 SMLR1H3BR10 107 aa5.93□□□□□ -1.46
SPG11-212ENST00000558790 CTRLP40313 264 aa5.93□□□□□ -1.46
SPG11-212ENST00000558790 XCL1P47992 114 aa5.93□□□□□ -1.46
SPG11-212ENST00000558790 RNASEKQ6P5S7 137 aaKnown RBP5.93□□□□□ -1.46
SPG11-212ENST00000558790 LYZL1Q6UWQ5 148 aa5.93□□□□□ -1.46
SPG11-212ENST00000558790 GATD1Q8NB37 220 aa5.93□□□□□ -1.46
SPG11-212ENST00000558790 UMAD1C9J7I0 102 aa5.92□□□□□ -1.46
SPG11-212ENST00000558790 F2Z2F3 143 aa5.92□□□□□ -1.46
SPG11-212ENST00000558790 APCSP02743 223 aa5.92□□□□□ -1.46
SPG11-212ENST00000558790 FGF6P10767 208 aa5.92□□□□□ -1.46
SPG11-212ENST00000558790 RPL39LQ96EH5 51 aaKnown RBP5.92□□□□□ -1.46
SPG11-212ENST00000558790 GNG13Q9P2W3 67 aa5.92□□□□□ -1.46
SPG11-212ENST00000558790 TRBV20OR9-2A0A075B6H5 130 aa5.91□□□□□ -1.46
SPG11-212ENST00000558790 XKRY2A2RUG3 117 aa5.91□□□□□ -1.46
SPG11-212ENST00000558790 RAB19A4D1S5 217 aa5.91□□□□□ -1.46
SPG11-212ENST00000558790 CCL25O15444 150 aa5.91□□□□□ -1.46
SPG11-212ENST00000558790 IFNA1P01562 189 aa5.91□□□□□ -1.46
SPG11-212ENST00000558790 GNG4P50150 75 aa5.91□□□□□ -1.46
SPG11-212ENST00000558790 ZNF345Q14585 488 aa5.91□□□□□ -1.46
SPG11-212ENST00000558790 OR5A1Q8NGJ0 315 aa5.91□□□□□ -1.46
SPG11-212ENST00000558790 CNFNQ9BYD5 112 aa5.91□□□□□ -1.46
SPG11-212ENST00000558790 MANBALQ9NQG1 85 aa5.91□□□□□ -1.46
SPG11-212ENST00000558790 PKIGQ9Y2B9 76 aa5.91□□□□□ -1.46
SPG11-212ENST00000558790 IGHV1-58A0A0C4DH39 117 aa5.9□□□□□ -1.46
SPG11-212ENST00000558790 H7C423 109 aa5.9□□□□□ -1.46
SPG11-212ENST00000558790 NCR2O95944 276 aa5.9□□□□□ -1.46
SPG11-212ENST00000558790 CCL20P78556 96 aa5.9□□□□□ -1.46
SPG11-212ENST00000558790 UBE2V1Q13404 147 aa5.9□□□□□ -1.46
SPG11-212ENST00000558790 C9orf62Q8N4C0 152 aa5.9□□□□□ -1.46
SPG11-212ENST00000558790 SMIM12Q96EX1 92 aa5.9□□□□□ -1.46
SPG11-212ENST00000558790 LINC00959A0A1B0GUT2 108 aa5.89□□□□□ -1.47
SPG11-212ENST00000558790 ZNF25P17030 456 aaPredicted RBP5.89□□□□□ -1.47
SPG11-212ENST00000558790 SYCNQ0VAF6 134 aa5.89□□□□□ -1.47
SPG11-212ENST00000558790 A0A1W2PNN7 141 aa5.88□□□□□ -1.47
SPG11-212ENST00000558790 FAM231BA6NCW3 169 aa5.88□□□□□ -1.47
SPG11-212ENST00000558790 SDHAF1A6NFY7 115 aa5.88□□□□□ -1.47
SPG11-212ENST00000558790 BCL2L11O43521 198 aa5.88□□□□□ -1.47
SPG11-212ENST00000558790 BCL2P10415 239 aa5.88□□□□□ -1.47
SPG11-212ENST00000558790 FOXA3P55318 350 aaPredicted RBP5.88□□□□□ -1.47
SPG11-212ENST00000558790 GAGE2BQ13066 116 aa5.88□□□□□ -1.47
SPG11-212ENST00000558790 Q75L30 129 aa5.88□□□□□ -1.47
SPG11-212ENST00000558790 PSORS1C2Q9UIG4 136 aa5.88□□□□□ -1.47
SPG11-212ENST00000558790 LOC107984640A0A0U1RRK4 108 aa5.87□□□□□ -1.47
SPG11-212ENST00000558790 KANTRA0A1W2PQU2 76 aa5.87□□□□□ -1.47
SPG11-212ENST00000558790 MEF2BQ02080 365 aaPredicted RBP5.87□□□□□ -1.47
SPG11-212ENST00000558790 TMEM101Q96IK0 257 aa5.87□□□□□ -1.47
SPG11-212ENST00000558790 BTF3L4Q96K17 158 aa5.87□□□□□ -1.47
SPG11-212ENST00000558790 RPP21Q9H633 154 aaKnown RBP5.87□□□□□ -1.47
SPG11-212ENST00000558790 IGLV4-69A0A075B6H9 119 aa5.86□□□□□ -1.47
SPG11-212ENST00000558790 TRAV1-1A0A0B4J248 108 aa5.86□□□□□ -1.47
SPG11-212ENST00000558790 I3L3M4 83 aa5.86□□□□□ -1.47
SPG11-212ENST00000558790 K7EN84 100 aa5.86□□□□□ -1.47
SPG11-212ENST00000558790 PDE6DO43924 150 aa5.86□□□□□ -1.47
SPG11-212ENST00000558790 TSHBP01222 138 aa5.86□□□□□ -1.47
SPG11-212ENST00000558790 MT-ND6P03923 174 aa5.86□□□□□ -1.47
SPG11-212ENST00000558790 CD164L2Q6UWJ8 174 aa5.86□□□□□ -1.47
SPG11-212ENST00000558790 ZNF664Q8N3J9 261 aa5.86□□□□□ -1.47
SPG11-212ENST00000558790 RNASE7Q9H1E1 156 aaKnown RBP5.86□□□□□ -1.47
SPG11-212ENST00000558790 TMEM242Q9NWH2 141 aa5.86□□□□□ -1.47
SPG11-212ENST00000558790 IFITM10A6NMD0 228 aa5.85□□□□□ -1.47
SPG11-212ENST00000558790 APOMO95445 188 aa5.85□□□□□ -1.47
SPG11-212ENST00000558790 ESDP10768 282 aa5.85□□□□□ -1.47
SPG11-212ENST00000558790 EIF5AP63241 154 aaKnown RBP5.85□□□□□ -1.47
SPG11-212ENST00000558790 SS18Q15532 418 aa5.85□□□□□ -1.47
SPG11-212ENST00000558790 C9orf116Q5BN46 136 aaPredicted RBP5.85□□□□□ -1.47
SPG11-212ENST00000558790 C1orf137Q5JT78 98 aa5.85□□□□□ -1.47
SPG11-212ENST00000558790 EIF5AL1Q6IS14 154 aaKnown RBP5.85□□□□□ -1.47
SPG11-212ENST00000558790 PHF5AQ7RTV0 110 aaKnown RBP5.85□□□□□ -1.47
SPG11-212ENST00000558790 NUP35Q8NFH5 326 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms