RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 CDIP1Q9H305 208 aa7□□□□□ -1.29
SMAD3-206ENST00000558739 RPP21Q9H633 154 aaKnown RBP7□□□□□ -1.29
SMAD3-206ENST00000558739 A0A1B0GUV1 79 aa6.99□□□□□ -1.29
SMAD3-206ENST00000558739 SRP19P09132 144 aaKnown RBP6.99□□□□□ -1.29
SMAD3-206ENST00000558739 NTF3P20783 257 aa6.99□□□□□ -1.29
SMAD3-206ENST00000558739 SSTP61278 116 aa6.99□□□□□ -1.29
SMAD3-206ENST00000558739 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.99□□□□□ -1.29
SMAD3-206ENST00000558739 TPPP3Q9BW30 176 aa6.99□□□□□ -1.29
SMAD3-206ENST00000558739 SSPOA2VEC9 5147 aa6.98□□□□□ -1.29
SMAD3-206ENST00000558739 F5H697 171 aa6.98□□□□□ -1.29
SMAD3-206ENST00000558739 TRGC1P0CF51 173 aa6.98□□□□□ -1.29
SMAD3-206ENST00000558739 RPL13AP40429 203 aaKnown RBP6.98□□□□□ -1.29
SMAD3-206ENST00000558739 FOXA3P55318 350 aaPredicted RBP6.98□□□□□ -1.29
SMAD3-206ENST00000558739 TMEM97Q5BJF2 176 aa6.98□□□□□ -1.29
SMAD3-206ENST00000558739 CT83Q5H943 113 aa6.98□□□□□ -1.29
SMAD3-206ENST00000558739 TMEM243Q9BU79 118 aa6.98□□□□□ -1.29
SMAD3-206ENST00000558739 EIF5A2Q9GZV4 153 aaKnown RBP6.98□□□□□ -1.29
SMAD3-206ENST00000558739 FOXI1Q12951 378 aa6.97□□□□□ -1.29
SMAD3-206ENST00000558739 SUMO4Q6EEV6 95 aa6.97□□□□□ -1.29
SMAD3-206ENST00000558739 TEX261Q6UWH6 196 aa6.97□□□□□ -1.29
SMAD3-206ENST00000558739 LINC01551Q86U37 167 aa6.97□□□□□ -1.29
SMAD3-206ENST00000558739 GATCO43716 136 aaKnown RBP6.96□□□□□ -1.3
SMAD3-206ENST00000558739 MGPP08493 103 aa6.96□□□□□ -1.3
SMAD3-206ENST00000558739 RASL11AQ6T310 242 aa6.96□□□□□ -1.3
SMAD3-206ENST00000558739 SMIM7Q9BQ49 75 aa6.96□□□□□ -1.3
SMAD3-206ENST00000558739 A0A087WZ39 114 aa6.95□□□□□ -1.3
SMAD3-206ENST00000558739 A8MWL6 223 aa6.95□□□□□ -1.3
SMAD3-206ENST00000558739 TPRXLQ17RH7 258 aa6.95□□□□□ -1.3
SMAD3-206ENST00000558739 NIT2Q9NQR4 276 aa6.95□□□□□ -1.3
SMAD3-206ENST00000558739 OSTCQ9NRP0 149 aa6.95□□□□□ -1.3
SMAD3-206ENST00000558739 FAM168BA1KXE4 195 aa6.94□□□□□ -1.3
SMAD3-206ENST00000558739 ZNF727A8MUV8 499 aa6.94□□□□□ -1.3
SMAD3-206ENST00000558739 C9JQL5 133 aa6.94□□□□□ -1.3
SMAD3-206ENST00000558739 CEBPGP53567 150 aa6.94□□□□□ -1.3
SMAD3-206ENST00000558739 SYCNQ0VAF6 134 aa6.94□□□□□ -1.3
SMAD3-206ENST00000558739 TWIST1Q15672 202 aa6.94□□□□□ -1.3
SMAD3-206ENST00000558739 FAM74A3Q4VXF1 159 aa6.94□□□□□ -1.3
SMAD3-206ENST00000558739 GATD1Q8NB37 220 aa6.94□□□□□ -1.3
SMAD3-206ENST00000558739 PGLYRP4Q96LB8 373 aa6.94□□□□□ -1.3
SMAD3-206ENST00000558739 SMDT1Q9H4I9 107 aa6.94□□□□□ -1.3
SMAD3-206ENST00000558739 A0A087X002 238 aa6.93□□□□□ -1.3
SMAD3-206ENST00000558739 LOC107984640A0A0U1RRK4 108 aa6.93□□□□□ -1.3
SMAD3-206ENST00000558739 XCL1P47992 114 aa6.93□□□□□ -1.3
SMAD3-206ENST00000558739 LCE2CQ5TA81 110 aa6.93□□□□□ -1.3
SMAD3-206ENST00000558739 TSKUQ8WUA8 353 aa6.93□□□□□ -1.3
SMAD3-206ENST00000558739 PKIGQ9Y2B9 76 aa6.93□□□□□ -1.3
SMAD3-206ENST00000558739 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.92□□□□□ -1.3
SMAD3-206ENST00000558739 RPL23P62829 140 aaKnown RBP6.92□□□□□ -1.3
SMAD3-206ENST00000558739 TMEM241Q24JQ0 296 aa6.92□□□□□ -1.3
SMAD3-206ENST00000558739 ISOC2Q96AB3 205 aa6.92□□□□□ -1.3
SMAD3-206ENST00000558739 V9GYV3 84 aa6.92□□□□□ -1.3
SMAD3-206ENST00000558739 HIGD1CA8MV81 97 aa6.91□□□□□ -1.3
SMAD3-206ENST00000558739 UBE2L6O14933 153 aa6.91□□□□□ -1.3
SMAD3-206ENST00000558739 CRYGAP11844 174 aa6.91□□□□□ -1.3
SMAD3-206ENST00000558739 RPL18AQ02543 176 aaKnown RBP6.91□□□□□ -1.3
SMAD3-206ENST00000558739 USH2AO75445 5202 aa6.91□□□□□ -1.3
SMAD3-206ENST00000558739 TRBV6-5A0A0K0K1A5 114 aa6.9□□□□□ -1.3
SMAD3-206ENST00000558739 A0A1B0GUT8 65 aa6.9□□□□□ -1.3
SMAD3-206ENST00000558739 CAMPP49913 170 aa6.9□□□□□ -1.3
SMAD3-206ENST00000558739 PEA15Q15121 130 aa6.9□□□□□ -1.3
SMAD3-206ENST00000558739 SMIM15Q7Z3B0 74 aa6.9□□□□□ -1.3
SMAD3-206ENST00000558739 TMEM191AQ9H0A3 160 aa6.9□□□□□ -1.3
SMAD3-206ENST00000558739 NAT8Q9UHE5 227 aa6.9□□□□□ -1.3
SMAD3-206ENST00000558739 SYNE2Q8WXH0 6885 aaKnown RBP6.89□□□□□ -1.31
SMAD3-206ENST00000558739 IGLV7-46A0A075B6I9 117 aa6.89□□□□□ -1.31
SMAD3-206ENST00000558739 IGHV1-58A0A0C4DH39 117 aa6.89□□□□□ -1.31
SMAD3-206ENST00000558739 NUP35Q8NFH5 326 aa6.89□□□□□ -1.31
SMAD3-206ENST00000558739 RPL39LQ96EH5 51 aaKnown RBP6.89□□□□□ -1.31
SMAD3-206ENST00000558739 OPRPNQ99935 248 aaPredicted RBP6.89□□□□□ -1.31
SMAD3-206ENST00000558739 CARHSP1Q9Y2V2 147 aaKnown RBP6.89□□□□□ -1.31
SMAD3-206ENST00000558739 IGLV4-69A0A075B6H9 119 aa6.88□□□□□ -1.31
SMAD3-206ENST00000558739 CCL25O15444 150 aa6.88□□□□□ -1.31
SMAD3-206ENST00000558739 APOMO95445 188 aa6.88□□□□□ -1.31
SMAD3-206ENST00000558739 NCR2O95944 276 aa6.88□□□□□ -1.31
SMAD3-206ENST00000558739 FGF6P10767 208 aa6.88□□□□□ -1.31
SMAD3-206ENST00000558739 COTL1Q14019 142 aa6.88□□□□□ -1.31
SMAD3-206ENST00000558739 BORCS7Q96B45 105 aa6.88□□□□□ -1.31
SMAD3-206ENST00000558739 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.87□□□□□ -1.31
SMAD3-206ENST00000558739 SMIM27A0A1W2PRY6 76 aa6.87□□□□□ -1.31
SMAD3-206ENST00000558739 IGKV2-29A2NJV5 120 aaPredicted RBP6.87□□□□□ -1.31
SMAD3-206ENST00000558739 SDHAF1A6NFY7 115 aa6.87□□□□□ -1.31
SMAD3-206ENST00000558739 ZNF561-AS1K7EIQ3 104 aa6.87□□□□□ -1.31
SMAD3-206ENST00000558739 RAB4AP20338 218 aa6.87□□□□□ -1.31
SMAD3-206ENST00000558739 ADIRFQ15847 76 aa6.87□□□□□ -1.31
SMAD3-206ENST00000558739 FAM19A5Q7Z5A7 132 aaPredicted RBP6.87□□□□□ -1.31
SMAD3-206ENST00000558739 KRTAP7-1Q8IUC3 87 aa6.87□□□□□ -1.31
SMAD3-206ENST00000558739 NAT8BQ9UHF3 227 aa6.87□□□□□ -1.31
SMAD3-206ENST00000558739 H7C423 109 aa6.86□□□□□ -1.31
SMAD3-206ENST00000558739 POLR2KP53803 58 aaKnown RBP6.86□□□□□ -1.31
SMAD3-206ENST00000558739 MT1HP80294 61 aa6.86□□□□□ -1.31
SMAD3-206ENST00000558739 OR5A1Q8NGJ0 315 aa6.86□□□□□ -1.31
SMAD3-206ENST00000558739 ESDP10768 282 aa6.85□□□□□ -1.31
SMAD3-206ENST00000558739 LORP23490 312 aaPredicted RBP6.85□□□□□ -1.31
SMAD3-206ENST00000558739 RIGQ13278 110 aa6.85□□□□□ -1.31
SMAD3-206ENST00000558739 RNASEKQ6P5S7 137 aaKnown RBP6.85□□□□□ -1.31
SMAD3-206ENST00000558739 AMN1Q8IY45 258 aa6.85□□□□□ -1.31
SMAD3-206ENST00000558739 MRAP2Q96G30 205 aa6.85□□□□□ -1.31
SMAD3-206ENST00000558739 TRBV27A0A0K0K1C4 114 aa6.84□□□□□ -1.31
SMAD3-206ENST00000558739 LINC00959A0A1B0GUT2 108 aa6.84□□□□□ -1.31
SMAD3-206ENST00000558739 I3L3M4 83 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms