RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 IGLV1-40P01703 118 aa11.64□□□□□ -0.55
HMBOX1-212ENST00000558662 COX6A2Q02221 97 aa11.64□□□□□ -0.55
HMBOX1-212ENST00000558662 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.64□□□□□ -0.55
HMBOX1-212ENST00000558662 TRAV7A0A075B6U4 112 aa11.63□□□□□ -0.55
HMBOX1-212ENST00000558662 SMIM26A0A096LP01 95 aa11.63□□□□□ -0.55
HMBOX1-212ENST00000558662 SPINK13Q1W4C9 94 aa11.63□□□□□ -0.55
HMBOX1-212ENST00000558662 LINC01560Q8TB33 94 aa11.63□□□□□ -0.55
HMBOX1-212ENST00000558662 SMIM11BQ8TCY0 68 aa11.63□□□□□ -0.55
HMBOX1-212ENST00000558662 LINC00167Q96N53 147 aa11.63□□□□□ -0.55
HMBOX1-212ENST00000558662 SND1-IT1Q9HBX3 110 aa11.63□□□□□ -0.55
HMBOX1-212ENST00000558662 DMXL1Q9Y485 3027 aa11.63□□□□□ -0.55
HMBOX1-212ENST00000558662 ZFHX2Q9C0A1 2572 aaPredicted RBP11.62□□□□□ -0.55
HMBOX1-212ENST00000558662 RIF1Q5UIP0 2472 aaKnown RBP11.62□□□□□ -0.55
HMBOX1-212ENST00000558662 XCL1P47992 114 aa11.62□□□□□ -0.55
HMBOX1-212ENST00000558662 XCL2Q9UBD3 114 aa11.62□□□□□ -0.55
HMBOX1-212ENST00000558662 A0A087WYN8 130 aa11.62□□□□□ -0.55
HMBOX1-212ENST00000558662 LINC00337Q8N6G1 96 aa11.62□□□□□ -0.55
HMBOX1-212ENST00000558662 C10orf105Q8TEF2 133 aa11.62□□□□□ -0.55
HMBOX1-212ENST00000558662 NDUFC1O43677 76 aa11.61□□□□□ -0.55
HMBOX1-212ENST00000558662 LY6HO94772 140 aa11.61□□□□□ -0.55
HMBOX1-212ENST00000558662 KLKP1Q107X0 134 aa11.61□□□□□ -0.55
HMBOX1-212ENST00000558662 CNOT1A5YKK6 2376 aaKnown RBP11.6□□□□□ -0.55
HMBOX1-212ENST00000558662 TMEM89A2RUT3 159 aa11.6□□□□□ -0.55
HMBOX1-212ENST00000558662 KNCNA6PVL3 124 aa11.6□□□□□ -0.55
HMBOX1-212ENST00000558662 CEP250Q9BV73 2442 aa11.59□□□□□ -0.55
HMBOX1-212ENST00000558662 IGKV2-28A0A075B6P5 120 aa11.59□□□□□ -0.55
HMBOX1-212ENST00000558662 IGKV2D-28P01615 120 aa11.59□□□□□ -0.55
HMBOX1-212ENST00000558662 IGHV3-11P01762 117 aa11.59□□□□□ -0.55
HMBOX1-212ENST00000558662 UBL5Q9BZL1 73 aa11.59□□□□□ -0.55
HMBOX1-212ENST00000558662 RS1O15537 224 aa11.59□□□□□ -0.55
HMBOX1-212ENST00000558662 CFAP47Q6ZTR5 3102 aa11.59□□□□□ -0.55
HMBOX1-212ENST00000558662 A0A0U1RRA0 63 aa11.58□□□□□ -0.56
HMBOX1-212ENST00000558662 LY6G6DO95868 133 aa11.58□□□□□ -0.56
HMBOX1-212ENST00000558662 HOXD3P31249 432 aaPredicted RBP11.58□□□□□ -0.56
HMBOX1-212ENST00000558662 TRBV10-1A0A0K0K1A3 114 aa11.57□□□□□ -0.56
HMBOX1-212ENST00000558662 IBA57-AS1B1ANH7 110 aa11.57□□□□□ -0.56
HMBOX1-212ENST00000558662 TMEM256-PLSCR3K7ERE1 68 aa11.57□□□□□ -0.56
HMBOX1-212ENST00000558662 LECT2O14960 151 aa11.57□□□□□ -0.56
HMBOX1-212ENST00000558662 PROK1P58294 105 aa11.57□□□□□ -0.56
HMBOX1-212ENST00000558662 Q8NA96 180 aa11.57□□□□□ -0.56
HMBOX1-212ENST00000558662 IGHV3-73A0A0B4J1V6 119 aa11.56□□□□□ -0.56
HMBOX1-212ENST00000558662 A0A1W2PRX2 142 aa11.56□□□□□ -0.56
HMBOX1-212ENST00000558662 H7BZZ5 65 aa11.56□□□□□ -0.56
HMBOX1-212ENST00000558662 CFHR3Q02985 330 aa11.56□□□□□ -0.56
HMBOX1-212ENST00000558662 C20orf197Q8N268 126 aa11.56□□□□□ -0.56
HMBOX1-212ENST00000558662 MIR7-3HGQ8N6C7 128 aa11.56□□□□□ -0.56
HMBOX1-212ENST00000558662 KALRNO60229 2985 aa11.56□□□□□ -0.56
HMBOX1-212ENST00000558662 IGKV3-20P01619 116 aa11.55□□□□□ -0.56
HMBOX1-212ENST00000558662 C9orf129Q5T035 196 aaKnown RBP11.55□□□□□ -0.56
HMBOX1-212ENST00000558662 COX7B2Q8TF08 81 aa11.55□□□□□ -0.56
HMBOX1-212ENST00000558662 A6NDX4 124 aa11.54□□□□□ -0.56
HMBOX1-212ENST00000558662 NCR3O14931 201 aa11.54□□□□□ -0.56
HMBOX1-212ENST00000558662 CDC42SE2Q9NRR3 84 aa11.54□□□□□ -0.56
HMBOX1-212ENST00000558662 J3QLI3 93 aa11.54□□□□□ -0.56
HMBOX1-212ENST00000558662 LMO4P61968 165 aa11.54□□□□□ -0.56
HMBOX1-212ENST00000558662 Q6ZSN1 163 aa11.54□□□□□ -0.56
HMBOX1-212ENST00000558662 RP1L1Q8IWN7 2480 aaPredicted RBP11.53□□□□□ -0.56
HMBOX1-212ENST00000558662 RPL36AP83881 106 aaKnown RBP11.53□□□□□ -0.56
HMBOX1-212ENST00000558662 LINC00336Q6ZUF6 198 aa11.53□□□□□ -0.56
HMBOX1-212ENST00000558662 RPL36ALQ969Q0 106 aaKnown RBP11.53□□□□□ -0.56
HMBOX1-212ENST00000558662 TRAV23DV6A0A075B6W5 121 aa11.52□□□□□ -0.57
HMBOX1-212ENST00000558662 SS18Q15532 418 aa11.52□□□□□ -0.57
HMBOX1-212ENST00000558662 SPTBN2O15020 2390 aa11.52□□□□□ -0.57
HMBOX1-212ENST00000558662 H3BQ85 93 aa11.51□□□□□ -0.57
HMBOX1-212ENST00000558662 MED13LQ71F56 2210 aa11.51□□□□□ -0.57
HMBOX1-212ENST00000558662 TRBV6-4A0A1B0GX49 114 aa11.51□□□□□ -0.57
HMBOX1-212ENST00000558662 CCL18P55774 89 aa11.51□□□□□ -0.57
HMBOX1-212ENST00000558662 PCNX1Q96RV3 2341 aa11.51□□□□□ -0.57
HMBOX1-212ENST00000558662 K7EQD1 137 aa11.5□□□□□ -0.57
HMBOX1-212ENST00000558662 IGHV3-38A0A0C4DH36 116 aa11.49□□□□□ -0.57
HMBOX1-212ENST00000558662 LINC00158P58513 81 aa11.49□□□□□ -0.57
HMBOX1-212ENST00000558662 ENHOQ6UWT2 76 aa11.49□□□□□ -0.57
HMBOX1-212ENST00000558662 HILS1P60008 231 aa11.49□□□□□ -0.57
HMBOX1-212ENST00000558662 C11orf72Q8NBR9 251 aa11.49□□□□□ -0.57
HMBOX1-212ENST00000558662 C1orf43Q9BWL3 253 aa11.49□□□□□ -0.57
HMBOX1-212ENST00000558662 C16orf95Q9H693 158 aa11.49□□□□□ -0.57
HMBOX1-212ENST00000558662 PDE6GP18545 87 aa11.48□□□□□ -0.57
HMBOX1-212ENST00000558662 BLCAPP62952 87 aa11.48□□□□□ -0.57
HMBOX1-212ENST00000558662 TMEM86BQ8N661 226 aa11.48□□□□□ -0.57
HMBOX1-212ENST00000558662 PTPRZ1P23471 2315 aaPredicted RBP11.47□□□□□ -0.57
HMBOX1-212ENST00000558662 LINC00482Q8N8I6 264 aa11.47□□□□□ -0.57
HMBOX1-212ENST00000558662 C11orf44Q8N8P7 122 aa11.47□□□□□ -0.57
HMBOX1-212ENST00000558662 DOPEY2Q9Y3R5 2298 aa11.47□□□□□ -0.57
HMBOX1-212ENST00000558662 LOC110117498A0A087WWA1 95 aa11.46□□□□□ -0.57
HMBOX1-212ENST00000558662 FAM19A1Q7Z5A9 133 aa11.46□□□□□ -0.57
HMBOX1-212ENST00000558662 Q9UF83 564 aa11.46□□□□□ -0.57
HMBOX1-212ENST00000558662 APC2O95996 2303 aa11.46□□□□□ -0.57
HMBOX1-212ENST00000558662 CACNA1BQ00975 2339 aa11.46□□□□□ -0.57
HMBOX1-212ENST00000558662 AKAP13Q12802 2813 aa11.46□□□□□ -0.57
HMBOX1-212ENST00000558662 CXCL6P80162 114 aa11.46□□□□□ -0.58
HMBOX1-212ENST00000558662 Q8N814 137 aa11.46□□□□□ -0.58
HMBOX1-212ENST00000558662 EDN2P20800 178 aa11.45□□□□□ -0.58
HMBOX1-212ENST00000558662 Q96MF0 132 aa11.45□□□□□ -0.58
HMBOX1-212ENST00000558662 UBE2L6O14933 153 aa11.44□□□□□ -0.58
HMBOX1-212ENST00000558662 PAX4O43316 350 aa11.44□□□□□ -0.58
HMBOX1-212ENST00000558662 ERC2-IT1O76042 136 aa11.44□□□□□ -0.58
HMBOX1-212ENST00000558662 INSP01308 110 aa11.44□□□□□ -0.58
HMBOX1-212ENST00000558662 GRNP28799 593 aaKnown RBP11.44□□□□□ -0.58
HMBOX1-212ENST00000558662 PIEZO2Q9H5I5 2752 aa11.43□□□□□ -0.58
HMBOX1-212ENST00000558662 H3BUX3 64 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms