RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 TMEM18Q96B42 140 aa5.59□□□□□ -1.51
TPM1-213ENST00000558400 IMMP2LQ96T52 175 aa5.59□□□□□ -1.51
TPM1-213ENST00000558400 SEC11CQ9BY50 192 aa5.59□□□□□ -1.51
TPM1-213ENST00000558400 CTDSP1Q9GZU7 261 aa5.59□□□□□ -1.51
TPM1-213ENST00000558400 C7orf77A4D0Y5 90 aa5.58□□□□□ -1.52
TPM1-213ENST00000558400 LECT2O14960 151 aa5.58□□□□□ -1.52
TPM1-213ENST00000558400 GAS8-AS1O95177 125 aa5.58□□□□□ -1.52
TPM1-213ENST00000558400 TSHBP01222 138 aa5.58□□□□□ -1.52
TPM1-213ENST00000558400 KRTAP10-1P60331 282 aa5.58□□□□□ -1.52
TPM1-213ENST00000558400 DGAT2L7PQ6IED9 249 aa5.58□□□□□ -1.52
TPM1-213ENST00000558400 CFAP161Q6P656 301 aa5.58□□□□□ -1.52
TPM1-213ENST00000558400 NRACQ8N912 160 aa5.58□□□□□ -1.52
TPM1-213ENST00000558400 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.57□□□□□ -1.52
TPM1-213ENST00000558400 IGKV2-29A2NJV5 120 aaPredicted RBP5.57□□□□□ -1.52
TPM1-213ENST00000558400 SMKR1H3BMG3 65 aa5.57□□□□□ -1.52
TPM1-213ENST00000558400 CCL25O15444 150 aa5.57□□□□□ -1.52
TPM1-213ENST00000558400 TNFRSF6BO95407 300 aa5.57□□□□□ -1.52
TPM1-213ENST00000558400 HLA-DQA1P01909 254 aa5.57□□□□□ -1.52
TPM1-213ENST00000558400 FUSP35637 526 aaKnown RBP eCLIP5.57□□□□□ -1.52
TPM1-213ENST00000558400 WFDC2Q14508 124 aa5.57□□□□□ -1.52
TPM1-213ENST00000558400 CLPSL2Q6UWE3 100 aa5.57□□□□□ -1.52
TPM1-213ENST00000558400 TMEM136Q6ZRR5 245 aa5.57□□□□□ -1.52
TPM1-213ENST00000558400 MRPL52Q86TS9 123 aaKnown RBP5.57□□□□□ -1.52
TPM1-213ENST00000558400 ORMDL3Q8N138 153 aa5.57□□□□□ -1.52
TPM1-213ENST00000558400 Q8N1X5 172 aa5.57□□□□□ -1.52
TPM1-213ENST00000558400 OR5A1Q8NGJ0 315 aa5.57□□□□□ -1.52
TPM1-213ENST00000558400 TMEM242Q9NWH2 141 aa5.57□□□□□ -1.52
TPM1-213ENST00000558400 LAMTOR2Q9Y2Q5 125 aa5.57□□□□□ -1.52
TPM1-213ENST00000558400 TMA7Q9Y2S6 64 aaKnown RBP5.57□□□□□ -1.52
TPM1-213ENST00000558400 CARHSP1Q9Y2V2 147 aaKnown RBP5.57□□□□□ -1.52
TPM1-213ENST00000558400 CSDC2Q9Y534 153 aaKnown RBP5.57□□□□□ -1.52
TPM1-213ENST00000558400 IGLV10-54A0A075B6I4 117 aa5.56□□□□□ -1.52
TPM1-213ENST00000558400 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.56□□□□□ -1.52
TPM1-213ENST00000558400 TRAV9-1A0A075B6T8 112 aa5.56□□□□□ -1.52
TPM1-213ENST00000558400 D6R8Y8 96 aa5.56□□□□□ -1.52
TPM1-213ENST00000558400 USP17L23D6RBM5 183 aa5.56□□□□□ -1.52
TPM1-213ENST00000558400 KRTAP26-1Q6PEX3 210 aa5.56□□□□□ -1.52
TPM1-213ENST00000558400 PRSS47A8MTI9 375 aa5.55□□□□□ -1.52
TPM1-213ENST00000558400 RAB5AP20339 215 aa5.55□□□□□ -1.52
TPM1-213ENST00000558400 S100PP25815 95 aa5.55□□□□□ -1.52
TPM1-213ENST00000558400 XGP55808 180 aa5.55□□□□□ -1.52
TPM1-213ENST00000558400 SS18Q15532 418 aa5.55□□□□□ -1.52
TPM1-213ENST00000558400 CBLN2Q8IUK8 224 aa5.55□□□□□ -1.52
TPM1-213ENST00000558400 SVBPQ8N300 66 aa5.55□□□□□ -1.52
TPM1-213ENST00000558400 ZNF664Q8N3J9 261 aa5.55□□□□□ -1.52
TPM1-213ENST00000558400 PRELID3AQ96N28 172 aa5.55□□□□□ -1.52
TPM1-213ENST00000558400 TIMM21Q9BVV7 248 aa5.55□□□□□ -1.52
TPM1-213ENST00000558400 CDC42SE2Q9NRR3 84 aa5.55□□□□□ -1.52
TPM1-213ENST00000558400 AP5S1Q9NUS5 200 aa5.55□□□□□ -1.52
TPM1-213ENST00000558400 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.54□□□□□ -1.52
TPM1-213ENST00000558400 IGKV3OR2-268A0A0C4DH90 116 aa5.54□□□□□ -1.52
TPM1-213ENST00000558400 C1orf196B1AJZ1 125 aa5.54□□□□□ -1.52
TPM1-213ENST00000558400 COX19Q49B96 90 aa5.54□□□□□ -1.52
TPM1-213ENST00000558400 C10orf91Q5T1B1 145 aa5.54□□□□□ -1.52
TPM1-213ENST00000558400 CHCHD10Q8WYQ3 142 aaPredicted RBP5.54□□□□□ -1.52
TPM1-213ENST00000558400 KRTAP4-12Q9BQ66 201 aa5.54□□□□□ -1.52
TPM1-213ENST00000558400 SMIM2Q9BVW6 85 aa5.54□□□□□ -1.52
TPM1-213ENST00000558400 LRP1BQ9NZR2 4599 aa5.54□□□□□ -1.52
TPM1-213ENST00000558400 LINC00959A0A1B0GUT2 108 aa5.53□□□□□ -1.52
TPM1-213ENST00000558400 GAGE12HA6NDE8 117 aa5.53□□□□□ -1.52
TPM1-213ENST00000558400 K7EMI3 77 aa5.53□□□□□ -1.52
TPM1-213ENST00000558400 SNAPINO95295 136 aa5.53□□□□□ -1.52
TPM1-213ENST00000558400 NPYP01303 97 aa5.53□□□□□ -1.52
TPM1-213ENST00000558400 PRSS1P07477 247 aa5.53□□□□□ -1.52
TPM1-213ENST00000558400 G0S2P27469 103 aa5.53□□□□□ -1.52
TPM1-213ENST00000558400 C9orf163Q8N9P6 203 aa5.53□□□□□ -1.52
TPM1-213ENST00000558400 MAP1LC3AQ9H492 121 aa5.53□□□□□ -1.52
TPM1-213ENST00000558400 RPS10P5Q9NQ39 176 aa5.53□□□□□ -1.52
TPM1-213ENST00000558400 SPANXA1Q9NS26 97 aa5.53□□□□□ -1.52
TPM1-213ENST00000558400 UBE2D4Q9Y2X8 147 aa5.53□□□□□ -1.52
TPM1-213ENST00000558400 APOBP04114 4563 aaKnown RBP5.53□□□□□ -1.52
TPM1-213ENST00000558400 hDV102S1A0JD36 115 aa5.52□□□□□ -1.53
TPM1-213ENST00000558400 EPM2AB3EWF7 344 aa5.52□□□□□ -1.53
TPM1-213ENST00000558400 CNBPP62633 177 aaKnown RBP5.52□□□□□ -1.53
TPM1-213ENST00000558400 RHEBQ15382 184 aa5.52□□□□□ -1.53
TPM1-213ENST00000558400 CD164L2Q6UWJ8 174 aa5.52□□□□□ -1.53
TPM1-213ENST00000558400 Q6ZSA8 131 aa5.52□□□□□ -1.53
TPM1-213ENST00000558400 MRPS36P82909 103 aaKnown RBP5.51□□□□□ -1.53
TPM1-213ENST00000558400 GNB1LQ9BYB4 327 aa5.51□□□□□ -1.53
TPM1-213ENST00000558400 FAM30AQ9NZY2 134 aa5.51□□□□□ -1.53
TPM1-213ENST00000558400 PYGO1Q9Y3Y4 419 aa5.51□□□□□ -1.53
TPM1-213ENST00000558400 IGHV1-58A0A0C4DH39 117 aa5.5□□□□□ -1.53
TPM1-213ENST00000558400 LOC389332A0A1B0GUA5 103 aa5.5□□□□□ -1.53
TPM1-213ENST00000558400 IFI27P40305 119 aaPredicted RBP5.5□□□□□ -1.53
TPM1-213ENST00000558400 XCL1P47992 114 aa5.5□□□□□ -1.53
TPM1-213ENST00000558400 FOXI1Q12951 378 aa5.5□□□□□ -1.53
TPM1-213ENST00000558400 ORMDL2Q53FV1 153 aa5.5□□□□□ -1.53
TPM1-213ENST00000558400 Q8N8P6 123 aa5.5□□□□□ -1.53
TPM1-213ENST00000558400 CHAC1Q9BUX1 264 aa5.5□□□□□ -1.53
TPM1-213ENST00000558400 NXT2Q9NPJ8 142 aaKnown RBP5.5□□□□□ -1.53
TPM1-213ENST00000558400 GVQW2A0A096LPI5 108 aaPredicted RBP5.49□□□□□ -1.53
TPM1-213ENST00000558400 MT-ND6P03923 174 aa5.49□□□□□ -1.53
TPM1-213ENST00000558400 NPSP0C0P6 89 aa5.49□□□□□ -1.53
TPM1-213ENST00000558400 MALP21145 153 aa5.49□□□□□ -1.53
TPM1-213ENST00000558400 RPL39P62891 51 aaKnown RBP5.49□□□□□ -1.53
TPM1-213ENST00000558400 LINC01620Q4KN68 170 aa5.49□□□□□ -1.53
TPM1-213ENST00000558400 SDIM1Q6ZPB5 146 aa5.49□□□□□ -1.53
TPM1-213ENST00000558400 PKIGQ9Y2B9 76 aa5.49□□□□□ -1.53
TPM1-213ENST00000558400 IGHV3-64A0A075B6Q5 118 aa5.48□□□□□ -1.53
TPM1-213ENST00000558400 TRAV13-1A0A0B4J241 112 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms