RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 A0A087WZ39 114 aa10.77□□□□□ -0.69
TSPAN3-204ENST00000558394 HMSDA8MTL9 139 aa10.77□□□□□ -0.69
TSPAN3-204ENST00000558394 H2AFB1P0C5Y9 115 aa10.77□□□□□ -0.69
TSPAN3-204ENST00000558394 PMCHP20382 165 aa10.77□□□□□ -0.69
TSPAN3-204ENST00000558394 SMIM15Q7Z3B0 74 aa10.77□□□□□ -0.69
TSPAN3-204ENST00000558394 RPL39LQ96EH5 51 aaKnown RBP10.77□□□□□ -0.69
TSPAN3-204ENST00000558394 FAT4Q6V0I7 4981 aa10.77□□□□□ -0.69
TSPAN3-204ENST00000558394 C19orf71A6NCJ1 209 aa10.76□□□□□ -0.69
TSPAN3-204ENST00000558394 SDHAF1A6NFY7 115 aa10.76□□□□□ -0.69
TSPAN3-204ENST00000558394 I3L3M4 83 aa10.75□□□□□ -0.69
TSPAN3-204ENST00000558394 COX7A2LO14548 114 aa10.75□□□□□ -0.69
TSPAN3-204ENST00000558394 RPL13AP40429 203 aaKnown RBP10.75□□□□□ -0.69
TSPAN3-204ENST00000558394 TEX261Q6UWH6 196 aa10.75□□□□□ -0.69
TSPAN3-204ENST00000558394 C9orf62Q8N4C0 152 aa10.75□□□□□ -0.69
TSPAN3-204ENST00000558394 MRAP2Q96G30 205 aa10.75□□□□□ -0.69
TSPAN3-204ENST00000558394 MANBALQ9NQG1 85 aa10.75□□□□□ -0.69
TSPAN3-204ENST00000558394 BIN3Q9NQY0 253 aa10.75□□□□□ -0.69
TSPAN3-204ENST00000558394 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.74□□□□□ -0.69
TSPAN3-204ENST00000558394 GNG4P50150 75 aa10.74□□□□□ -0.69
TSPAN3-204ENST00000558394 MEF2BQ02080 365 aaPredicted RBP10.74□□□□□ -0.69
TSPAN3-204ENST00000558394 LCE2AQ5TA79 106 aaPredicted RBP10.74□□□□□ -0.69
TSPAN3-204ENST00000558394 C11orf52Q96A22 123 aa10.74□□□□□ -0.69
TSPAN3-204ENST00000558394 SMIM12Q96EX1 92 aa10.74□□□□□ -0.69
TSPAN3-204ENST00000558394 CTRLP40313 264 aa10.73□□□□□ -0.69
TSPAN3-204ENST00000558394 GNG13Q9P2W3 67 aa10.73□□□□□ -0.69
TSPAN3-204ENST00000558394 C2orf48Q96LS8 159 aa10.72□□□□□ -0.69
TSPAN3-204ENST00000558394 OPRPNQ99935 248 aaPredicted RBP10.72□□□□□ -0.69
TSPAN3-204ENST00000558394 CDC42SE2Q9NRR3 84 aa10.72□□□□□ -0.69
TSPAN3-204ENST00000558394 RAB19A4D1S5 217 aa10.71□□□□□ -0.69
TSPAN3-204ENST00000558394 C1orf196B1AJZ1 125 aa10.71□□□□□ -0.69
TSPAN3-204ENST00000558394 CCL20P78556 96 aa10.7□□□□□ -0.7
TSPAN3-204ENST00000558394 CNFNQ9BYD5 112 aa10.7□□□□□ -0.7
TSPAN3-204ENST00000558394 KRTAP1-4P0C5Y4 121 aa10.69□□□□□ -0.7
TSPAN3-204ENST00000558394 ESDP10768 282 aa10.69□□□□□ -0.7
TSPAN3-204ENST00000558394 FAM210AQ96ND0 272 aa10.69□□□□□ -0.7
TSPAN3-204ENST00000558394 MRPL52Q86TS9 123 aaKnown RBP10.68□□□□□ -0.7
TSPAN3-204ENST00000558394 ST20Q9HBF5 79 aa10.68□□□□□ -0.7
TSPAN3-204ENST00000558394 TMEM242Q9NWH2 141 aa10.68□□□□□ -0.7
TSPAN3-204ENST00000558394 TEX46H3BTG2 121 aa10.67□□□□□ -0.7
TSPAN3-204ENST00000558394 SPAG11BQ08648 103 aa10.67□□□□□ -0.7
TSPAN3-204ENST00000558394 RNF151Q2KHN1 245 aa10.67□□□□□ -0.7
TSPAN3-204ENST00000558394 NUDT10Q8NFP7 164 aa10.67□□□□□ -0.7
TSPAN3-204ENST00000558394 NUDT11Q96G61 164 aa10.67□□□□□ -0.7
TSPAN3-204ENST00000558394 IMMP2LQ96T52 175 aa10.67□□□□□ -0.7
TSPAN3-204ENST00000558394 C7orf77A4D0Y5 90 aa10.66□□□□□ -0.7
TSPAN3-204ENST00000558394 TSPAN13O95857 204 aa10.66□□□□□ -0.7
TSPAN3-204ENST00000558394 TSHBP01222 138 aa10.66□□□□□ -0.7
TSPAN3-204ENST00000558394 UBE2BP63146 152 aa10.66□□□□□ -0.7
TSPAN3-204ENST00000558394 SMAGPQ0VAQ4 97 aa10.66□□□□□ -0.7
TSPAN3-204ENST00000558394 FAM19A5Q7Z5A7 132 aaPredicted RBP10.66□□□□□ -0.7
TSPAN3-204ENST00000558394 C5orf38Q86SI9 138 aa10.66□□□□□ -0.7
TSPAN3-204ENST00000558394 RPP21Q9H633 154 aaKnown RBP10.66□□□□□ -0.7
TSPAN3-204ENST00000558394 CARHSP1Q9Y2V2 147 aaKnown RBP10.66□□□□□ -0.7
TSPAN3-204ENST00000558394 TRAV13-1A0A0B4J241 112 aa10.65□□□□□ -0.7
TSPAN3-204ENST00000558394 TRBV6-5A0A0K0K1A5 114 aa10.65□□□□□ -0.7
TSPAN3-204ENST00000558394 PDE6DO43924 150 aa10.65□□□□□ -0.7
TSPAN3-204ENST00000558394 FOXA3P55318 350 aaPredicted RBP10.65□□□□□ -0.7
TSPAN3-204ENST00000558394 MED9Q9NWA0 146 aa10.65□□□□□ -0.7
TSPAN3-204ENST00000558394 FAM168BA1KXE4 195 aa10.64□□□□□ -0.71
TSPAN3-204ENST00000558394 TRBV20OR9-2A0A075B6H5 130 aa10.63□□□□□ -0.71
TSPAN3-204ENST00000558394 KRTAP11-1Q8IUC1 163 aa10.63□□□□□ -0.71
TSPAN3-204ENST00000558394 MRPL35Q9NZE8 188 aaKnown RBP10.63□□□□□ -0.71
TSPAN3-204ENST00000558394 OR10D4PQ8NGN7 298 aa10.62□□□□□ -0.71
TSPAN3-204ENST00000558394 F8WDY8 70 aa10.61□□□□□ -0.71
TSPAN3-204ENST00000558394 NDUFA1O15239 70 aa10.61□□□□□ -0.71
TSPAN3-204ENST00000558394 FCER1GP30273 86 aa10.61□□□□□ -0.71
TSPAN3-204ENST00000558394 RNASE13Q5GAN3 156 aaKnown RBP10.61□□□□□ -0.71
TSPAN3-204ENST00000558394 RNASE7Q9H1E1 156 aaKnown RBP10.61□□□□□ -0.71
TSPAN3-204ENST00000558394 M0QXV9 152 aa10.6□□□□□ -0.71
TSPAN3-204ENST00000558394 GAGE2EQ4V326 116 aa10.6□□□□□ -0.71
TSPAN3-204ENST00000558394 ORAOV1Q8WV07 137 aa10.6□□□□□ -0.71
TSPAN3-204ENST00000558394 GAGE2DQ9UEU5 116 aa10.6□□□□□ -0.71
TSPAN3-204ENST00000558394 TRBV27A0A0K0K1C4 114 aa10.59□□□□□ -0.71
TSPAN3-204ENST00000558394 TMEM241Q24JQ0 296 aa10.59□□□□□ -0.71
TSPAN3-204ENST00000558394 BORCS7Q96B45 105 aa10.59□□□□□ -0.71
TSPAN3-204ENST00000558394 CSDC2Q9Y534 153 aaKnown RBP10.59□□□□□ -0.71
TSPAN3-204ENST00000558394 TLX1NBP0CAT3 122 aa10.58□□□□□ -0.72
TSPAN3-204ENST00000558394 POLR2KP53803 58 aaKnown RBP10.58□□□□□ -0.72
TSPAN3-204ENST00000558394 TAGLN2P37802 199 aaKnown RBP10.57□□□□□ -0.72
TSPAN3-204ENST00000558394 SLC51BQ86UW2 128 aa10.57□□□□□ -0.72
TSPAN3-204ENST00000558394 TCTE3Q8IZS6 198 aa10.57□□□□□ -0.72
TSPAN3-204ENST00000558394 UBE2D4Q9Y2X8 147 aa10.57□□□□□ -0.72
TSPAN3-204ENST00000558394 K7EN84 100 aa10.55□□□□□ -0.72
TSPAN3-204ENST00000558394 VCYO14598 125 aa10.55□□□□□ -0.72
TSPAN3-204ENST00000558394 TMEM18Q96B42 140 aa10.55□□□□□ -0.72
TSPAN3-204ENST00000558394 SMDT1Q9H4I9 107 aa10.55□□□□□ -0.72
TSPAN3-204ENST00000558394 A8MWL6 223 aa10.54□□□□□ -0.72
TSPAN3-204ENST00000558394 GATCO43716 136 aaKnown RBP10.54□□□□□ -0.72
TSPAN3-204ENST00000558394 ZNF861PO60384 105 aa10.54□□□□□ -0.72
TSPAN3-204ENST00000558394 C10orf25Q5T742 122 aa10.54□□□□□ -0.72
TSPAN3-204ENST00000558394 Q6ZUT4 128 aa10.54□□□□□ -0.72
TSPAN3-204ENST00000558394 OCC1Q8TAD7 63 aa10.54□□□□□ -0.72
TSPAN3-204ENST00000558394 KIR2DL4Q99706 377 aa10.54□□□□□ -0.72
TSPAN3-204ENST00000558394 UNQ6190/PRO20217Q6UXQ8 127 aa10.53□□□□□ -0.72
TSPAN3-204ENST00000558394 CDIP1Q9H305 208 aa10.53□□□□□ -0.72
TSPAN3-204ENST00000558394 C6orf48Q9UBA6 75 aa10.53□□□□□ -0.72
TSPAN3-204ENST00000558394 TYMSOSQ8TAI1 123 aa10.52□□□□□ -0.73
TSPAN3-204ENST00000558394 PPP1R17O96001 155 aa10.51□□□□□ -0.73
TSPAN3-204ENST00000558394 TMEM191AQ9H0A3 160 aa10.51□□□□□ -0.73
TSPAN3-204ENST00000558394 RAB4AP20338 218 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms